RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
PABPN1-205ENST00000555295 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
PABPN1-205ENST00000555295 LAMB2P55268 1798 aa16.56■□□□□ 0.24
PABPN1-205ENST00000555295 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
PABPN1-205ENST00000555295 ZNRF3Q9ULT6 936 aa16.55■□□□□ 0.24
PABPN1-205ENST00000555295 SF3B3Q15393 1217 aaKnown RBP16.54■□□□□ 0.24
PABPN1-205ENST00000555295 RTL5Q5HYW3 569 aaPredicted RBP16.54■□□□□ 0.24
PABPN1-205ENST00000555295 IFFO2Q5TF58 517 aa16.54■□□□□ 0.24
PABPN1-205ENST00000555295 ZBTB38Q8NAP3 1195 aaPredicted RBP16.54■□□□□ 0.24
PABPN1-205ENST00000555295 C8orf58Q8NAV2 365 aa16.54■□□□□ 0.24
PABPN1-205ENST00000555295 CCDC191Q8NCU4 936 aa16.54■□□□□ 0.24
PABPN1-205ENST00000555295 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
PABPN1-205ENST00000555295 MYD88Q99836 296 aa16.54■□□□□ 0.24
PABPN1-205ENST00000555295 PHAXQ9H814 394 aaKnown RBP16.54■□□□□ 0.24
PABPN1-205ENST00000555295 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
PABPN1-205ENST00000555295 TNIP1Q15025 636 aa16.53■□□□□ 0.24
PABPN1-205ENST00000555295 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
PABPN1-205ENST00000555295 COL4A5P29400 1685 aa16.53■□□□□ 0.24
PABPN1-205ENST00000555295 IL16Q14005 1332 aa16.52■□□□□ 0.24
PABPN1-205ENST00000555295 PASKQ96RG2 1323 aa16.52■□□□□ 0.24
PABPN1-205ENST00000555295 TMEM88BA6NKF7 163 aa16.52■□□□□ 0.24
PABPN1-205ENST00000555295 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
PABPN1-205ENST00000555295 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
PABPN1-205ENST00000555295 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
PABPN1-205ENST00000555295 WWC1Q8IX03 1113 aa16.52■□□□□ 0.24
PABPN1-205ENST00000555295 CNTROBQ8N137 903 aa16.52■□□□□ 0.24
PABPN1-205ENST00000555295 TSR2Q969E8 191 aaKnown RBP16.52■□□□□ 0.24
PABPN1-205ENST00000555295 DDX60Q8IY21 1712 aaKnown RBP16.52■□□□□ 0.24
PABPN1-205ENST00000555295 CDHR2Q9BYE9 1310 aa16.51■□□□□ 0.23
PABPN1-205ENST00000555295 SCNN1DP51172 638 aa16.51■□□□□ 0.23
PABPN1-205ENST00000555295 CCDC152Q4G0S7 254 aa16.51■□□□□ 0.23
PABPN1-205ENST00000555295 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
PABPN1-205ENST00000555295 MAP1SQ66K74 1059 aaPredicted RBP16.51■□□□□ 0.23
PABPN1-205ENST00000555295 CIAPIN1Q6FI81 312 aa16.51■□□□□ 0.23
PABPN1-205ENST00000555295 MIER1Q8N108 512 aa16.51■□□□□ 0.23
PABPN1-205ENST00000555295 EYA3Q99504 573 aa16.51■□□□□ 0.23
PABPN1-205ENST00000555295 METTL22Q9BUU2 404 aaPredicted RBP16.51■□□□□ 0.23
PABPN1-205ENST00000555295 BCL2L13Q9BXK5 485 aa16.51■□□□□ 0.23
PABPN1-205ENST00000555295 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
PABPN1-205ENST00000555295 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
PABPN1-205ENST00000555295 C6orf229H3BNL8 230 aa16.5■□□□□ 0.23
PABPN1-205ENST00000555295 PCCAP05165 728 aaPredicted RBP16.5■□□□□ 0.23
PABPN1-205ENST00000555295 WASHC4Q2M389 1173 aa16.5■□□□□ 0.23
PABPN1-205ENST00000555295 TWISTNBQ3B726 338 aaPredicted RBP16.5■□□□□ 0.23
PABPN1-205ENST00000555295 SLC51AQ86UW1 340 aa16.5■□□□□ 0.23
PABPN1-205ENST00000555295 ADARB2Q9NS39 739 aaKnown RBP16.5■□□□□ 0.23
PABPN1-205ENST00000555295 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
PABPN1-205ENST00000555295 LRRC37AA6NMS7 1700 aa16.49■□□□□ 0.23
PABPN1-205ENST00000555295 PDE8AO60658 829 aa16.49■□□□□ 0.23
PABPN1-205ENST00000555295 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
PABPN1-205ENST00000555295 EPS15P42566 896 aa16.49■□□□□ 0.23
PABPN1-205ENST00000555295 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
PABPN1-205ENST00000555295 CXCL9Q07325 125 aa16.49■□□□□ 0.23
PABPN1-205ENST00000555295 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
PABPN1-205ENST00000555295 TSPYL6Q8N831 410 aa16.49■□□□□ 0.23
PABPN1-205ENST00000555295 CELF1Q92879 486 aaKnown RBP16.49■□□□□ 0.23
PABPN1-205ENST00000555295 GPRC5DQ9NZD1 345 aa16.49■□□□□ 0.23
PABPN1-205ENST00000555295 MAP3K2Q9Y2U5 619 aa16.49■□□□□ 0.23
PABPN1-205ENST00000555295 G3V3G9 751 aa16.48■□□□□ 0.23
PABPN1-205ENST00000555295 GMPSP49915 693 aaPredicted RBP16.48■□□□□ 0.23
PABPN1-205ENST00000555295 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
PABPN1-205ENST00000555295 CNTNAP1P78357 1384 aa16.48■□□□□ 0.23
PABPN1-205ENST00000555295 PI4KAP2A4QPH2 592 aa16.47■□□□□ 0.23
PABPN1-205ENST00000555295 RAD17O75943 681 aa16.47■□□□□ 0.23
PABPN1-205ENST00000555295 HSPA1AP0DMV8 641 aaKnown RBP16.47■□□□□ 0.23
PABPN1-205ENST00000555295 HSPA1BP0DMV9 641 aaKnown RBP16.47■□□□□ 0.23
PABPN1-205ENST00000555295 PI4KAP1Q8N8J0 262 aa16.47■□□□□ 0.23
PABPN1-205ENST00000555295 ANKIB1Q9P2G1 1089 aa16.47■□□□□ 0.23
PABPN1-205ENST00000555295 ABT1Q9ULW3 272 aaKnown RBP16.47■□□□□ 0.23
PABPN1-205ENST00000555295 H7C1D1 291 aa16.46■□□□□ 0.23
PABPN1-205ENST00000555295 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
PABPN1-205ENST00000555295 GPSM2P81274 684 aa16.46■□□□□ 0.23
PABPN1-205ENST00000555295 WDR63Q8IWG1 891 aa16.46■□□□□ 0.23
PABPN1-205ENST00000555295 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
PABPN1-205ENST00000555295 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
PABPN1-205ENST00000555295 RIMBP2O15034 1052 aa16.45■□□□□ 0.22
PABPN1-205ENST00000555295 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
PABPN1-205ENST00000555295 AIDAQ96BJ3 306 aa16.45■□□□□ 0.22
PABPN1-205ENST00000555295 ZC3H12CQ9C0D7 883 aaKnown RBP16.45■□□□□ 0.22
PABPN1-205ENST00000555295 DUOX1Q9NRD9 1551 aa16.45■□□□□ 0.22
PABPN1-205ENST00000555295 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
PABPN1-205ENST00000555295 TAF1P21675 1872 aa16.44■□□□□ 0.22
PABPN1-205ENST00000555295 UFL1O94874 794 aa16.44■□□□□ 0.22
PABPN1-205ENST00000555295 MYH16Q9H6N6 1097 aa16.44■□□□□ 0.22
PABPN1-205ENST00000555295 DBNDD1Q9H9R9 158 aa16.44■□□□□ 0.22
PABPN1-205ENST00000555295 GGA1Q9UJY5 639 aa16.44■□□□□ 0.22
PABPN1-205ENST00000555295 SALL2Q9Y467 1007 aaPredicted RBP16.44■□□□□ 0.22
PABPN1-205ENST00000555295 ECE2O60344 883 aa16.43■□□□□ 0.22
PABPN1-205ENST00000555295 CTSWP56202 376 aa16.43■□□□□ 0.22
PABPN1-205ENST00000555295 FKBP5Q13451 457 aaPredicted RBP16.43■□□□□ 0.22
PABPN1-205ENST00000555295 DEFB115Q30KQ5 88 aa16.43■□□□□ 0.22
PABPN1-205ENST00000555295 TBC1D16Q8TBP0 767 aa16.43■□□□□ 0.22
PABPN1-205ENST00000555295 ZC3H15Q8WU90 426 aaKnown RBP16.43■□□□□ 0.22
PABPN1-205ENST00000555295 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
PABPN1-205ENST00000555295 SEC31BQ9NQW1 1179 aa16.43■□□□□ 0.22
PABPN1-205ENST00000555295 PODXL2Q9NZ53 605 aa16.43■□□□□ 0.22
PABPN1-205ENST00000555295 POLLQ9UGP5 575 aa16.43■□□□□ 0.22
PABPN1-205ENST00000555295 YDJCA8MPS7 323 aa16.42■□□□□ 0.22
PABPN1-205ENST00000555295 RPS12P25398 132 aaKnown RBP16.42■□□□□ 0.22
PABPN1-205ENST00000555295 FLIIQ13045 1269 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms