RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MARK1Q9P0L2 795 aa8.96□□□□□ -0.98
CKS1BP1-201ENST00000555221 TMEM63CQ9P1W3 806 aa8.96□□□□□ -0.98
CKS1BP1-201ENST00000555221 PARP2Q9UGN5 583 aa8.96□□□□□ -0.98
CKS1BP1-201ENST00000555221 FOXD3Q9UJU5 478 aaPredicted RBP8.96□□□□□ -0.98
CKS1BP1-201ENST00000555221 ATXN7L1Q9ULK2 861 aaPredicted RBP8.96□□□□□ -0.98
CKS1BP1-201ENST00000555221 BNIP3LO60238 219 aa8.95□□□□□ -0.98
CKS1BP1-201ENST00000555221 GTPBP3Q969Y2 492 aaKnown RBP8.95□□□□□ -0.98
CKS1BP1-201ENST00000555221 TRERF1Q96PN7 1200 aa8.95□□□□□ -0.98
CKS1BP1-201ENST00000555221 GSX2Q9BZM3 304 aa8.95□□□□□ -0.98
CKS1BP1-201ENST00000555221 ZFYVE28Q9HCC9 887 aa8.95□□□□□ -0.98
CKS1BP1-201ENST00000555221 MRS2Q9HD23 443 aa8.95□□□□□ -0.98
CKS1BP1-201ENST00000555221 WWC3Q9ULE0 1092 aa8.95□□□□□ -0.98
CKS1BP1-201ENST00000555221 PSMD2Q13200 908 aa8.94□□□□□ -0.98
CKS1BP1-201ENST00000555221 TMC4Q7Z404 712 aa8.94□□□□□ -0.98
CKS1BP1-201ENST00000555221 ABHD17AQ96GS6 310 aa8.94□□□□□ -0.98
CKS1BP1-201ENST00000555221 PNMA5Q96PV4 448 aa8.94□□□□□ -0.98
CKS1BP1-201ENST00000555221 CFHR5Q9BXR6 569 aa8.94□□□□□ -0.98
CKS1BP1-201ENST00000555221 SASH3O75995 380 aa8.93□□□□□ -0.98
CKS1BP1-201ENST00000555221 GNA15P30679 374 aa8.93□□□□□ -0.98
CKS1BP1-201ENST00000555221 DAB2P98082 770 aa8.93□□□□□ -0.98
CKS1BP1-201ENST00000555221 NEUROD1Q13562 356 aa8.93□□□□□ -0.98
CKS1BP1-201ENST00000555221 SPG7Q9UQ90 795 aa8.93□□□□□ -0.98
CKS1BP1-201ENST00000555221 SORBS3O60504 671 aa8.92□□□□□ -0.98
CKS1BP1-201ENST00000555221 PPFIA3O75145 1194 aa8.92□□□□□ -0.98
CKS1BP1-201ENST00000555221 RARAP10276 462 aa8.92□□□□□ -0.98
CKS1BP1-201ENST00000555221 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
CKS1BP1-201ENST00000555221 MRPL58Q14197 206 aaKnown RBP8.92□□□□□ -0.98
CKS1BP1-201ENST00000555221 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
CKS1BP1-201ENST00000555221 CCDC74AQ96AQ1 378 aa8.92□□□□□ -0.98
CKS1BP1-201ENST00000555221 SETDB2Q96T68 719 aa8.92□□□□□ -0.98
CKS1BP1-201ENST00000555221 STRN4Q9NRL3 753 aa8.92□□□□□ -0.98
CKS1BP1-201ENST00000555221 CDC14CA4D256 554 aa8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 CD33P20138 364 aa8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 FGFR3P22607 806 aa8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 CES1P23141 567 aa8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 SV2AQ7L0J3 742 aa8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 KRT25Q7Z3Z0 450 aa8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 C1orf127Q8N9H9 656 aa8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 CHRDQ9H2X0 955 aa8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 NLRP2Q9NX02 1062 aa8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.91□□□□□ -0.98
CKS1BP1-201ENST00000555221 PHF20L1A8MW92 1017 aa8.9□□□□□ -0.98
CKS1BP1-201ENST00000555221 GIPC1O14908 333 aa8.9□□□□□ -0.98
CKS1BP1-201ENST00000555221 MAP3K6O95382 1288 aa8.9□□□□□ -0.98
CKS1BP1-201ENST00000555221 TARSP26639 723 aaKnown RBP8.9□□□□□ -0.98
CKS1BP1-201ENST00000555221 USPL1Q5W0Q7 1092 aa8.9□□□□□ -0.98
CKS1BP1-201ENST00000555221 OR13H1Q8NG92 308 aa8.9□□□□□ -0.98
CKS1BP1-201ENST00000555221 NANOS1Q8WY41 292 aaKnown RBP8.9□□□□□ -0.98
CKS1BP1-201ENST00000555221 CNTN3Q9P232 1028 aa8.9□□□□□ -0.98
CKS1BP1-201ENST00000555221 MMP20O60882 483 aa8.89□□□□□ -0.99
CKS1BP1-201ENST00000555221 RECKO95980 971 aa8.89□□□□□ -0.99
CKS1BP1-201ENST00000555221 PSAPP07602 524 aa8.89□□□□□ -0.99
CKS1BP1-201ENST00000555221 NFKB1P19838 968 aa8.89□□□□□ -0.99
CKS1BP1-201ENST00000555221 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.89□□□□□ -0.99
CKS1BP1-201ENST00000555221 GALNT12Q8IXK2 581 aa8.89□□□□□ -0.99
CKS1BP1-201ENST00000555221 VWA5B2Q8N398 1253 aa8.89□□□□□ -0.99
CKS1BP1-201ENST00000555221 FAM161BQ96MY7 647 aa8.89□□□□□ -0.99
CKS1BP1-201ENST00000555221 VTI1BQ9UEU0 232 aa8.89□□□□□ -0.99
CKS1BP1-201ENST00000555221 EREGO14944 169 aa8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 EDN3P14138 238 aa8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 SOX18P35713 384 aa8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 TSNAXIP1Q2TAA8 658 aa8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 BHMTQ93088 406 aa8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 SLC30A3Q99726 388 aa8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 IGSF5Q9NSI5 407 aa8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 TLR7Q9NYK1 1049 aaKnown RBP8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 ZFATQ9P243 1243 aa8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 HCN2Q9UL51 889 aa8.88□□□□□ -0.99
CKS1BP1-201ENST00000555221 LCE2BO14633 110 aa8.87□□□□□ -0.99
CKS1BP1-201ENST00000555221 TCF3P15923 654 aa8.87□□□□□ -0.99
CKS1BP1-201ENST00000555221 VEGFBP49765 207 aa8.87□□□□□ -0.99
CKS1BP1-201ENST00000555221 GRIN2CQ14957 1233 aa8.87□□□□□ -0.99
CKS1BP1-201ENST00000555221 EPS8L3Q8TE67 593 aaKnown RBP8.87□□□□□ -0.99
CKS1BP1-201ENST00000555221 NPHS2Q9NP85 383 aa8.87□□□□□ -0.99
CKS1BP1-201ENST00000555221 AK5Q9Y6K8 562 aa8.87□□□□□ -0.99
CKS1BP1-201ENST00000555221 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
CKS1BP1-201ENST00000555221 HOXD8P13378 290 aaPredicted RBP8.86□□□□□ -0.99
CKS1BP1-201ENST00000555221 EIF4BP23588 611 aaKnown RBP8.86□□□□□ -0.99
CKS1BP1-201ENST00000555221 PLAURQ03405 335 aa8.86□□□□□ -0.99
CKS1BP1-201ENST00000555221 BACH2Q9BYV9 841 aa8.86□□□□□ -0.99
CKS1BP1-201ENST00000555221 SRCIN1Q9C0H9 1055 aa8.86□□□□□ -0.99
CKS1BP1-201ENST00000555221 RNF19AQ9NV58 838 aa8.86□□□□□ -0.99
CKS1BP1-201ENST00000555221 PRR12Q9ULL5 1215 aa8.86□□□□□ -0.99
CKS1BP1-201ENST00000555221 GPR25O00155 361 aa8.85□□□□□ -0.99
CKS1BP1-201ENST00000555221 CYP2E1P05181 493 aaPredicted RBP8.85□□□□□ -0.99
CKS1BP1-201ENST00000555221 IRS1P35568 1242 aa8.85□□□□□ -0.99
CKS1BP1-201ENST00000555221 CTBSQ01459 385 aa8.85□□□□□ -0.99
CKS1BP1-201ENST00000555221 HYAL2Q12891 473 aa8.85□□□□□ -0.99
CKS1BP1-201ENST00000555221 DHX32Q7L7V1 743 aaKnown RBP8.85□□□□□ -0.99
CKS1BP1-201ENST00000555221 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
CKS1BP1-201ENST00000555221 C12orf49Q9H741 205 aa8.85□□□□□ -0.99
CKS1BP1-201ENST00000555221 NXF1Q9UBU9 619 aaKnown RBP8.85□□□□□ -0.99
CKS1BP1-201ENST00000555221 GADD45BO75293 160 aaPredicted RBP8.84□□□□□ -0.99
CKS1BP1-201ENST00000555221 BMP4P12644 408 aa8.84□□□□□ -0.99
CKS1BP1-201ENST00000555221 PCSK7Q16549 785 aa8.84□□□□□ -0.99
CKS1BP1-201ENST00000555221 RAB44Q7Z6P3 723 aaPredicted RBP8.84□□□□□ -0.99
CKS1BP1-201ENST00000555221 NCAPG2Q86XI2 1143 aa8.84□□□□□ -0.99
CKS1BP1-201ENST00000555221 SUV39H2Q9H5I1 410 aa8.84□□□□□ -0.99
CKS1BP1-201ENST00000555221 KANSL3Q9P2N6 904 aa8.84□□□□□ -0.99
CKS1BP1-201ENST00000555221 SALL4Q9UJQ4 1053 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms