RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 BBOX1O75936 387 aa16.69■□□□□ 0.26
SHMT2-211ENST00000554310 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-211ENST00000554310 DPY19L2Q6NUT2 758 aa16.69■□□□□ 0.26
SHMT2-211ENST00000554310 IGKV5-2P06315 115 aa16.68■□□□□ 0.26
SHMT2-211ENST00000554310 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
SHMT2-211ENST00000554310 NEURL1BA8MQ27 555 aa16.67■□□□□ 0.26
SHMT2-211ENST00000554310 SP8Q8IXZ3 490 aa16.67■□□□□ 0.26
SHMT2-211ENST00000554310 DNAAF4Q8WXU2 420 aa16.67■□□□□ 0.26
SHMT2-211ENST00000554310 PDE8AO60658 829 aa16.66■□□□□ 0.26
SHMT2-211ENST00000554310 TOMM70O94826 608 aa16.66■□□□□ 0.26
SHMT2-211ENST00000554310 SLFN5Q08AF3 891 aa16.66■□□□□ 0.26
SHMT2-211ENST00000554310 C16orf71Q8IYS4 520 aaPredicted RBP16.66■□□□□ 0.26
SHMT2-211ENST00000554310 DUOX1Q9NRD9 1551 aa16.66■□□□□ 0.26
SHMT2-211ENST00000554310 COL4A1P02462 1669 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 COL4A5P29400 1685 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 LTBP1Q14766 1721 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 CWF19L2Q2TBE0 894 aaKnown RBP16.65■□□□□ 0.26
SHMT2-211ENST00000554310 CCDC152Q4G0S7 254 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 SLC51AQ86UW1 340 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 SUPT20HQ8NEM7 779 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 LINS1Q8NG48 757 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 JDP2Q8WYK2 163 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 SCN4AP35499 1836 aa16.65■□□□□ 0.26
SHMT2-211ENST00000554310 VEGFAP15692 232 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-211ENST00000554310 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-211ENST00000554310 RBM46Q8TBY0 533 aaKnown RBP16.64■□□□□ 0.25
SHMT2-211ENST00000554310 RTFDC1Q9BY42 306 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-211ENST00000554310 VPS33BQ9H267 617 aa16.64■□□□□ 0.25
SHMT2-211ENST00000554310 GCKRQ14397 625 aa16.63■□□□□ 0.25
SHMT2-211ENST00000554310 LARGE2Q8N3Y3 721 aa16.63■□□□□ 0.25
SHMT2-211ENST00000554310 MPNDQ8N594 471 aa16.63■□□□□ 0.25
SHMT2-211ENST00000554310 CELF1Q92879 486 aaKnown RBP16.63■□□□□ 0.25
SHMT2-211ENST00000554310 ZNF541Q9H0D2 1346 aa16.63■□□□□ 0.25
SHMT2-211ENST00000554310 RTL9Q8NET4 1388 aa16.63■□□□□ 0.25
SHMT2-211ENST00000554310 H7C1W4 665 aa16.62■□□□□ 0.25
SHMT2-211ENST00000554310 FZD9O00144 591 aa16.62■□□□□ 0.25
SHMT2-211ENST00000554310 CTSWP56202 376 aa16.62■□□□□ 0.25
SHMT2-211ENST00000554310 UBE3BQ7Z3V4 1068 aa16.62■□□□□ 0.25
SHMT2-211ENST00000554310 JARID2Q92833 1246 aaPredicted RBP16.62■□□□□ 0.25
SHMT2-211ENST00000554310 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
SHMT2-211ENST00000554310 PPIP5K2O43314 1243 aa16.61■□□□□ 0.25
SHMT2-211ENST00000554310 DDNO94850 711 aaPredicted RBP16.61■□□□□ 0.25
SHMT2-211ENST00000554310 RPS8P62241 208 aaKnown RBP16.61■□□□□ 0.25
SHMT2-211ENST00000554310 TRMT2AQ8IZ69 625 aaKnown RBP16.61■□□□□ 0.25
SHMT2-211ENST00000554310 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
SHMT2-211ENST00000554310 SPEF2Q9C093 1822 aa16.61■□□□□ 0.25
SHMT2-211ENST00000554310 IQCA1LA6NCM1 817 aa16.6■□□□□ 0.25
SHMT2-211ENST00000554310 F6X3S4 739 aa16.6■□□□□ 0.25
SHMT2-211ENST00000554310 FSTL1Q12841 308 aa16.6■□□□□ 0.25
SHMT2-211ENST00000554310 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
SHMT2-211ENST00000554310 NIM1KQ8IY84 436 aa16.6■□□□□ 0.25
SHMT2-211ENST00000554310 PLA2G12BQ9BX93 195 aa16.6■□□□□ 0.25
SHMT2-211ENST00000554310 SEC31BQ9NQW1 1179 aa16.6■□□□□ 0.25
SHMT2-211ENST00000554310 POTECB2RU33 542 aa16.59■□□□□ 0.25
SHMT2-211ENST00000554310 CT47B1P0C2W7 299 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-211ENST00000554310 HSPA6P17066 643 aa16.59■□□□□ 0.25
SHMT2-211ENST00000554310 EIF6P56537 245 aaKnown RBP16.59■□□□□ 0.25
SHMT2-211ENST00000554310 KIAA2012Q0VF49 1180 aa16.59■□□□□ 0.25
SHMT2-211ENST00000554310 AOC3Q16853 763 aa16.59■□□□□ 0.25
SHMT2-211ENST00000554310 GPC2Q8N158 579 aa16.59■□□□□ 0.25
SHMT2-211ENST00000554310 SMC1BQ8NDV3 1235 aa16.59■□□□□ 0.25
SHMT2-211ENST00000554310 CDC5LQ99459 802 aaKnown RBP16.59■□□□□ 0.25
SHMT2-211ENST00000554310 PTPRCP08575 1304 aa16.59■□□□□ 0.25
SHMT2-211ENST00000554310 CASP7P55210 303 aa16.58■□□□□ 0.24
SHMT2-211ENST00000554310 ALDH1L2Q3SY69 923 aa16.58■□□□□ 0.24
SHMT2-211ENST00000554310 ANKRD18AQ8IVF6 992 aa16.58■□□□□ 0.24
SHMT2-211ENST00000554310 MRPL50Q8N5N7 158 aaKnown RBP16.58■□□□□ 0.24
SHMT2-211ENST00000554310 TTLL11Q8NHH1 800 aa16.58■□□□□ 0.24
SHMT2-211ENST00000554310 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.24
SHMT2-211ENST00000554310 ALDH1L1O75891 902 aa16.57■□□□□ 0.24
SHMT2-211ENST00000554310 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
SHMT2-211ENST00000554310 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
SHMT2-211ENST00000554310 GPSM2P81274 684 aa16.56■□□□□ 0.24
SHMT2-211ENST00000554310 SRCIN1Q9C0H9 1055 aa16.56■□□□□ 0.24
SHMT2-211ENST00000554310 GREM2Q9H772 168 aa16.56■□□□□ 0.24
SHMT2-211ENST00000554310 PODXL2Q9NZ53 605 aa16.56■□□□□ 0.24
SHMT2-211ENST00000554310 ZNRF3Q9ULT6 936 aa16.56■□□□□ 0.24
SHMT2-211ENST00000554310 GRM8O00222 908 aa16.55■□□□□ 0.24
SHMT2-211ENST00000554310 SLC4A10Q6U841 1118 aa16.55■□□□□ 0.24
SHMT2-211ENST00000554310 EYA3Q99504 573 aa16.55■□□□□ 0.24
SHMT2-211ENST00000554310 SMC4Q9NTJ3 1288 aa16.55■□□□□ 0.24
SHMT2-211ENST00000554310 HACL1Q9UJ83 578 aa16.55■□□□□ 0.24
SHMT2-211ENST00000554310 ADAMTSL1Q8N6G6 1762 aa16.55■□□□□ 0.24
SHMT2-211ENST00000554310 XDHP47989 1333 aa16.54■□□□□ 0.24
SHMT2-211ENST00000554310 CSF1RP07333 972 aa16.54■□□□□ 0.24
SHMT2-211ENST00000554310 WASHC4Q2M389 1173 aa16.54■□□□□ 0.24
SHMT2-211ENST00000554310 TBC1D16Q8TBP0 767 aa16.54■□□□□ 0.24
SHMT2-211ENST00000554310 BCL2L13Q9BXK5 485 aa16.54■□□□□ 0.24
SHMT2-211ENST00000554310 TAF1DQ9H5J8 278 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-211ENST00000554310 GJA3Q9Y6H8 435 aa16.54■□□□□ 0.24
SHMT2-211ENST00000554310 C6orf229H3BNL8 230 aa16.53■□□□□ 0.24
SHMT2-211ENST00000554310 FAM161AQ3B820 660 aa16.53■□□□□ 0.24
SHMT2-211ENST00000554310 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-211ENST00000554310 C9orf78Q9NZ63 289 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-211ENST00000554310 ANKIB1Q9P2G1 1089 aa16.53■□□□□ 0.24
SHMT2-211ENST00000554310 POLLQ9UGP5 575 aa16.53■□□□□ 0.24
SHMT2-211ENST00000554310 GGA1Q9UJY5 639 aa16.53■□□□□ 0.24
SHMT2-211ENST00000554310 A0A1B0GUL6 1792 aa16.52■□□□□ 0.24
SHMT2-211ENST00000554310 UFL1O94874 794 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms