RNA–Protein interactions for RNA: ENST00000553932.5

LINC00639-201, long intergenic non-protein coding RNA 639, humanhuman

TSL 2 BASIC

Gene LINC00639, Length 4,496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-201ENST00000553932 NAA30Q147X3 362 aaPredicted RBP17.13■□□□□ 0.33
LINC00639-201ENST00000553932 MEX3CQ5U5Q3 659 aaKnown RBP17.13■□□□□ 0.33
LINC00639-201ENST00000553932 NRBP1Q9UHY1 535 aa17.13■□□□□ 0.33
LINC00639-201ENST00000553932 ZSCAN16Q9H4T2 348 aaPredicted RBP17.13■□□□□ 0.33
LINC00639-201ENST00000553932 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
LINC00639-201ENST00000553932 IMMTQ16891 758 aaKnown RBP17.13■□□□□ 0.33
LINC00639-201ENST00000553932 PAFAH1B1P43034 410 aa17.12■□□□□ 0.33
LINC00639-201ENST00000553932 CCDC114Q96M63 670 aa17.12■□□□□ 0.33
LINC00639-201ENST00000553932 GOLGA5Q8TBA6 731 aa17.12■□□□□ 0.33
LINC00639-201ENST00000553932 WDHD1O75717 1129 aaPredicted RBP17.12■□□□□ 0.33
LINC00639-201ENST00000553932 XBP1P17861 261 aa17.12■□□□□ 0.33
LINC00639-201ENST00000553932 ANKLE2Q86XL3 938 aa17.12■□□□□ 0.33
LINC00639-201ENST00000553932 AFAP1L1Q8TED9 768 aa17.12■□□□□ 0.33
LINC00639-201ENST00000553932 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
LINC00639-201ENST00000553932 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
LINC00639-201ENST00000553932 EIF2AK4Q9P2K8 1649 aaKnown RBP17.12■□□□□ 0.33
LINC00639-201ENST00000553932 CCDC175P0C221 793 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 FAM76AQ8TAV0 307 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 JADE2Q9NQC1 790 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 ACEP12821 1306 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 IL16Q14005 1332 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 CTAGE9A4FU28 777 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 MAATS1Q7Z4T9 603 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 MKRN1Q9UHC7 482 aaKnown RBP17.11■□□□□ 0.33
LINC00639-201ENST00000553932 MAGI2Q86UL8 1455 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
LINC00639-201ENST00000553932 ENOX2Q16206 610 aaKnown RBP17.11■□□□□ 0.33
LINC00639-201ENST00000553932 MRPS27Q92552 414 aaKnown RBP17.11■□□□□ 0.33
LINC00639-201ENST00000553932 BRF1Q92994 677 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 PREX2Q70Z35 1606 aa17.11■□□□□ 0.33
LINC00639-201ENST00000553932 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
LINC00639-201ENST00000553932 MAP2K1Q02750 393 aaPredicted RBP17.11■□□□□ 0.33
LINC00639-201ENST00000553932 KDM5CP41229 1560 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 FBXO38Q6PIJ6 1188 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 MYO1CO00159 1063 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 HLTFQ14527 1009 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC00639-201ENST00000553932 ZNF569Q5MCW4 686 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 CCDC113Q9H0I3 377 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 HSF2BPO75031 334 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 CLNS1AP54105 237 aaKnown RBP17.1■□□□□ 0.33
LINC00639-201ENST00000553932 ICE2Q659A1 982 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 NEBLO76041 1014 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 ATF3P18847 181 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 SSR1P43307 286 aaKnown RBP17.1■□□□□ 0.33
LINC00639-201ENST00000553932 SPA17Q15506 151 aa17.1■□□□□ 0.33
LINC00639-201ENST00000553932 MRPL50Q8N5N7 158 aaKnown RBP17.1■□□□□ 0.33
LINC00639-201ENST00000553932 FOXO3O43524 673 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 EPS15P42566 896 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 LIG3P49916 1009 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 POGZQ7Z3K3 1410 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 NDUFAB1O14561 156 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 CHMLP26374 656 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 CCDC121Q6ZUS5 278 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 LUC7LQ9NQ29 371 aaKnown RBP17.09■□□□□ 0.33
LINC00639-201ENST00000553932 CTNNA3Q9UI47 895 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 ZCCHC11Q5TAX3 1644 aaKnown RBP17.09■□□□□ 0.33
LINC00639-201ENST00000553932 RIMS2Q9UQ26 1411 aa17.09■□□□□ 0.33
LINC00639-201ENST00000553932 GOLGA6L10A0A0M3HER8 536 aa17.08■□□□□ 0.33
LINC00639-201ENST00000553932 ZC3H6P61129 1189 aaKnown RBP17.08■□□□□ 0.33
LINC00639-201ENST00000553932 PIP4K2BP78356 416 aa17.08■□□□□ 0.33
LINC00639-201ENST00000553932 RAD51AP2Q09MP3 1159 aa17.08■□□□□ 0.33
LINC00639-201ENST00000553932 ZRSR2Q15696 482 aaKnown RBP17.08■□□□□ 0.33
LINC00639-201ENST00000553932 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.33
LINC00639-201ENST00000553932 HYPKQ9NX55 129 aa17.08■□□□□ 0.33
LINC00639-201ENST00000553932 ZMYM3Q14202 1370 aa17.08■□□□□ 0.33
LINC00639-201ENST00000553932 ABCC1P33527 1531 aa17.08■□□□□ 0.33
LINC00639-201ENST00000553932 YEATS4O95619 227 aa17.08■□□□□ 0.32
LINC00639-201ENST00000553932 TXLNAP40222 546 aa17.08■□□□□ 0.32
LINC00639-201ENST00000553932 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC00639-201ENST00000553932 TNRQ92752 1358 aa17.08■□□□□ 0.32
LINC00639-201ENST00000553932 STIM1Q13586 685 aa17.08■□□□□ 0.32
LINC00639-201ENST00000553932 SEC31AO94979 1220 aaKnown RBP17.08■□□□□ 0.32
LINC00639-201ENST00000553932 IFFO1Q0D2I5 559 aa17.08■□□□□ 0.32
LINC00639-201ENST00000553932 UHRF1BP1LA0JNW5 1464 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 LRCH2Q5VUJ6 765 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 RPAINQ86UA6 219 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 TSPYL6Q8N831 410 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 CCDC8Q9H0W5 538 aaPredicted RBP17.07■□□□□ 0.32
LINC00639-201ENST00000553932 CLSTN2Q9H4D0 955 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 SYCP1Q15431 976 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 TRIM22Q8IYM9 498 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 POLR3AO14802 1390 aaPredicted RBP17.07■□□□□ 0.32
LINC00639-201ENST00000553932 OPA1O60313 960 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
LINC00639-201ENST00000553932 SYKP43405 635 aa17.06■□□□□ 0.32
LINC00639-201ENST00000553932 LRRC8AQ8IWT6 810 aa17.06■□□□□ 0.32
LINC00639-201ENST00000553932 CACTINQ8WUQ7 758 aaKnown RBP17.06■□□□□ 0.32
LINC00639-201ENST00000553932 TAF4BQ92750 862 aa17.06■□□□□ 0.32
LINC00639-201ENST00000553932 RAD50Q92878 1312 aa17.06■□□□□ 0.32
LINC00639-201ENST00000553932 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
LINC00639-201ENST00000553932 CPSF2Q9P2I0 782 aaKnown RBP17.06■□□□□ 0.32
LINC00639-201ENST00000553932 CEP85Q6P2H3 762 aa17.06■□□□□ 0.32
LINC00639-201ENST00000553932 RSRC1Q96IZ7 334 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms