RNA–Protein interactions for RNA: ENST00000553699.5

GSKIP-202, Transcript of GSK3B interacting protein, humanhuman

TSL 4

Gene GSKIP, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-202ENST00000553699 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
GSKIP-202ENST00000553699 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.42
GSKIP-202ENST00000553699 DICER1Q9UPY3 1922 aaKnown RBP12.4□□□□□ -0.42
GSKIP-202ENST00000553699 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
GSKIP-202ENST00000553699 CCDC88AQ3V6T2 1871 aa12.4□□□□□ -0.42
GSKIP-202ENST00000553699 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
GSKIP-202ENST00000553699 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
GSKIP-202ENST00000553699 RBM17Q96I25 401 aaKnown RBP12.39□□□□□ -0.43
GSKIP-202ENST00000553699 CRAMP1Q96RY5 1269 aa12.39□□□□□ -0.43
GSKIP-202ENST00000553699 LTBP1Q14766 1721 aa12.39□□□□□ -0.43
GSKIP-202ENST00000553699 IL16Q14005 1332 aa12.38□□□□□ -0.43
GSKIP-202ENST00000553699 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
GSKIP-202ENST00000553699 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
GSKIP-202ENST00000553699 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
GSKIP-202ENST00000553699 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
GSKIP-202ENST00000553699 SLC10A5Q5PT55 438 aa12.38□□□□□ -0.43
GSKIP-202ENST00000553699 WWC1Q8IX03 1113 aa12.38□□□□□ -0.43
GSKIP-202ENST00000553699 TRMT112Q9UI30 125 aaKnown RBP12.38□□□□□ -0.43
GSKIP-202ENST00000553699 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
GSKIP-202ENST00000553699 PPEF1O14829 653 aaPredicted RBP12.37□□□□□ -0.43
GSKIP-202ENST00000553699 GRIPAP1Q4V328 841 aa12.37□□□□□ -0.43
GSKIP-202ENST00000553699 CCDC30Q5VVM6 783 aa12.37□□□□□ -0.43
GSKIP-202ENST00000553699 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
GSKIP-202ENST00000553699 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
GSKIP-202ENST00000553699 C8orf58Q8NAV2 365 aa12.37□□□□□ -0.43
GSKIP-202ENST00000553699 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
GSKIP-202ENST00000553699 LAMB2P55268 1798 aa12.37□□□□□ -0.43
GSKIP-202ENST00000553699 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
GSKIP-202ENST00000553699 RIC3Q7Z5B4 369 aa12.36□□□□□ -0.43
GSKIP-202ENST00000553699 TSR2Q969E8 191 aaKnown RBP12.36□□□□□ -0.43
GSKIP-202ENST00000553699 PSMD1Q99460 953 aa12.36□□□□□ -0.43
GSKIP-202ENST00000553699 ISCA1Q9BUE6 129 aa12.36□□□□□ -0.43
GSKIP-202ENST00000553699 TMX4Q9H1E5 349 aaPredicted RBP12.36□□□□□ -0.43
GSKIP-202ENST00000553699 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
GSKIP-202ENST00000553699 DDX60Q8IY21 1712 aaKnown RBP12.35□□□□□ -0.43
GSKIP-202ENST00000553699 DDX58O95786 925 aaKnown RBP12.35□□□□□ -0.43
GSKIP-202ENST00000553699 HCLS1P14317 486 aaPredicted RBP12.35□□□□□ -0.43
GSKIP-202ENST00000553699 IARSP41252 1262 aaKnown RBP12.35□□□□□ -0.43
GSKIP-202ENST00000553699 PNMA8AQ86V59 439 aaPredicted RBP12.35□□□□□ -0.43
GSKIP-202ENST00000553699 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
GSKIP-202ENST00000553699 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
GSKIP-202ENST00000553699 ABCC4O15439 1325 aa12.35□□□□□ -0.43
GSKIP-202ENST00000553699 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
GSKIP-202ENST00000553699 TRIM28Q13263 835 aaKnown RBP12.34□□□□□ -0.43
GSKIP-202ENST00000553699 TWISTNBQ3B726 338 aaPredicted RBP12.34□□□□□ -0.43
GSKIP-202ENST00000553699 TSPYL6Q8N831 410 aa12.34□□□□□ -0.43
GSKIP-202ENST00000553699 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
GSKIP-202ENST00000553699 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
GSKIP-202ENST00000553699 WDR63Q8IWG1 891 aa12.33□□□□□ -0.44
GSKIP-202ENST00000553699 JDP2Q8WYK2 163 aa12.33□□□□□ -0.44
GSKIP-202ENST00000553699 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
GSKIP-202ENST00000553699 ATP6V0A2Q9Y487 856 aa12.33□□□□□ -0.44
GSKIP-202ENST00000553699 TLL2Q9Y6L7 1015 aa12.33□□□□□ -0.44
GSKIP-202ENST00000553699 FANCIQ9NVI1 1328 aa12.33□□□□□ -0.44
GSKIP-202ENST00000553699 TCERG1O14776 1098 aaKnown RBP12.32□□□□□ -0.44
GSKIP-202ENST00000553699 BBOX1O75936 387 aa12.32□□□□□ -0.44
GSKIP-202ENST00000553699 GRAPQ13588 217 aa12.32□□□□□ -0.44
GSKIP-202ENST00000553699 CIAPIN1Q6FI81 312 aa12.32□□□□□ -0.44
GSKIP-202ENST00000553699 FAM9BQ8IZU0 186 aa12.32□□□□□ -0.44
GSKIP-202ENST00000553699 GRAPLQ8TC17 118 aaPredicted RBP12.32□□□□□ -0.44
GSKIP-202ENST00000553699 MYD88Q99836 296 aa12.32□□□□□ -0.44
GSKIP-202ENST00000553699 HACL1Q9UJ83 578 aa12.32□□□□□ -0.44
GSKIP-202ENST00000553699 HPS5Q9UPZ3 1129 aa12.32□□□□□ -0.44
GSKIP-202ENST00000553699 COLQQ9Y215 455 aaPredicted RBP12.32□□□□□ -0.44
GSKIP-202ENST00000553699 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
GSKIP-202ENST00000553699 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
GSKIP-202ENST00000553699 LRRC37AA6NMS7 1700 aa12.31□□□□□ -0.44
GSKIP-202ENST00000553699 FZD9O00144 591 aa12.31□□□□□ -0.44
GSKIP-202ENST00000553699 HSP90B1P14625 803 aaKnown RBP12.31□□□□□ -0.44
GSKIP-202ENST00000553699 EPHX2P34913 555 aa12.31□□□□□ -0.44
GSKIP-202ENST00000553699 TMC4Q7Z404 712 aa12.31□□□□□ -0.44
GSKIP-202ENST00000553699 CTU1Q7Z7A3 348 aaKnown RBP12.31□□□□□ -0.44
GSKIP-202ENST00000553699 ZBTB38Q8NAP3 1195 aaPredicted RBP12.31□□□□□ -0.44
GSKIP-202ENST00000553699 CCDC191Q8NCU4 936 aa12.31□□□□□ -0.44
GSKIP-202ENST00000553699 SUPT20HQ8NEM7 779 aa12.31□□□□□ -0.44
GSKIP-202ENST00000553699 ZNF428Q96B54 188 aa12.31□□□□□ -0.44
GSKIP-202ENST00000553699 METTL22Q9BUU2 404 aaPredicted RBP12.31□□□□□ -0.44
GSKIP-202ENST00000553699 SCN4AP35499 1836 aa12.3□□□□□ -0.44
GSKIP-202ENST00000553699 COL4A5P29400 1685 aa12.3□□□□□ -0.44
GSKIP-202ENST00000553699 IRS4O14654 1257 aaPredicted RBP12.3□□□□□ -0.44
GSKIP-202ENST00000553699 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
GSKIP-202ENST00000553699 RTL5Q5HYW3 569 aaPredicted RBP12.3□□□□□ -0.44
GSKIP-202ENST00000553699 SLC51AQ86UW1 340 aa12.3□□□□□ -0.44
GSKIP-202ENST00000553699 SP8Q8IXZ3 490 aa12.3□□□□□ -0.44
GSKIP-202ENST00000553699 LARGE2Q8N3Y3 721 aa12.3□□□□□ -0.44
GSKIP-202ENST00000553699 MPNDQ8N594 471 aa12.3□□□□□ -0.44
GSKIP-202ENST00000553699 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
GSKIP-202ENST00000553699 CWC25Q9NXE8 425 aaPredicted RBP12.3□□□□□ -0.44
GSKIP-202ENST00000553699 MAP3K2Q9Y2U5 619 aa12.3□□□□□ -0.44
GSKIP-202ENST00000553699 PPIP5K2O43314 1243 aa12.29□□□□□ -0.44
GSKIP-202ENST00000553699 EIF6P56537 245 aaKnown RBP12.29□□□□□ -0.44
GSKIP-202ENST00000553699 NEXNQ0ZGT2 675 aa12.29□□□□□ -0.44
GSKIP-202ENST00000553699 CST9Q5W186 159 aa12.29□□□□□ -0.44
GSKIP-202ENST00000553699 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
GSKIP-202ENST00000553699 KSR2Q6VAB6 950 aa12.29□□□□□ -0.44
GSKIP-202ENST00000553699 NIM1KQ8IY84 436 aa12.29□□□□□ -0.44
GSKIP-202ENST00000553699 GPC2Q8N158 579 aa12.29□□□□□ -0.44
GSKIP-202ENST00000553699 RTFDC1Q9BY42 306 aaPredicted RBP12.29□□□□□ -0.44
GSKIP-202ENST00000553699 MYH16Q9H6N6 1097 aa12.29□□□□□ -0.44
GSKIP-202ENST00000553699 DUOX1Q9NRD9 1551 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms