RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 CCER2I3L3R5 266 aa16.84■□□□□ 0.29
HNRNPC-205ENST00000553300 FZD9O00144 591 aa16.84■□□□□ 0.29
HNRNPC-205ENST00000553300 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
HNRNPC-205ENST00000553300 DDX60Q8IY21 1712 aaKnown RBP16.83■□□□□ 0.29
HNRNPC-205ENST00000553300 POTECB2RU33 542 aa16.83■□□□□ 0.28
HNRNPC-205ENST00000553300 DDNO94850 711 aaPredicted RBP16.83■□□□□ 0.28
HNRNPC-205ENST00000553300 FLIIQ13045 1269 aa16.83■□□□□ 0.28
HNRNPC-205ENST00000553300 L3MBTL3Q96JM7 780 aaPredicted RBP16.83■□□□□ 0.28
HNRNPC-205ENST00000553300 APLP1P51693 650 aa16.82■□□□□ 0.28
HNRNPC-205ENST00000553300 RTL5Q5HYW3 569 aaPredicted RBP16.82■□□□□ 0.28
HNRNPC-205ENST00000553300 DPP8Q6V1X1 898 aaPredicted RBP16.82■□□□□ 0.28
HNRNPC-205ENST00000553300 LARGE2Q8N3Y3 721 aa16.82■□□□□ 0.28
HNRNPC-205ENST00000553300 MPNDQ8N594 471 aa16.82■□□□□ 0.28
HNRNPC-205ENST00000553300 ZNF428Q96B54 188 aa16.82■□□□□ 0.28
HNRNPC-205ENST00000553300 RTFDC1Q9BY42 306 aaPredicted RBP16.82■□□□□ 0.28
HNRNPC-205ENST00000553300 SPINK5Q9NQ38 1064 aaPredicted RBP16.82■□□□□ 0.28
HNRNPC-205ENST00000553300 ZNF521Q96K83 1311 aa16.82■□□□□ 0.28
HNRNPC-205ENST00000553300 PDE8AO60658 829 aa16.81■□□□□ 0.28
HNRNPC-205ENST00000553300 EIF6P56537 245 aaKnown RBP16.81■□□□□ 0.28
HNRNPC-205ENST00000553300 FKBP5Q13451 457 aaPredicted RBP16.81■□□□□ 0.28
HNRNPC-205ENST00000553300 CCDC152Q4G0S7 254 aa16.81■□□□□ 0.28
HNRNPC-205ENST00000553300 G2E3Q7L622 706 aa16.81■□□□□ 0.28
HNRNPC-205ENST00000553300 GPC2Q8N158 579 aa16.81■□□□□ 0.28
HNRNPC-205ENST00000553300 CDHR2Q9BYE9 1310 aa16.81■□□□□ 0.28
HNRNPC-205ENST00000553300 IGKV5-2P06315 115 aa16.8■□□□□ 0.28
HNRNPC-205ENST00000553300 RPS8P62241 208 aaKnown RBP16.8■□□□□ 0.28
HNRNPC-205ENST00000553300 SCN4AP35499 1836 aa16.8■□□□□ 0.28
HNRNPC-205ENST00000553300 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
HNRNPC-205ENST00000553300 NIM1KQ8IY84 436 aa16.79■□□□□ 0.28
HNRNPC-205ENST00000553300 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
HNRNPC-205ENST00000553300 ZNF541Q9H0D2 1346 aa16.78■□□□□ 0.28
HNRNPC-205ENST00000553300 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
HNRNPC-205ENST00000553300 E9PSI1 815 aa16.78■□□□□ 0.28
HNRNPC-205ENST00000553300 LINS1Q8NG48 757 aa16.78■□□□□ 0.28
HNRNPC-205ENST00000553300 CELF1Q92879 486 aaKnown RBP16.78■□□□□ 0.28
HNRNPC-205ENST00000553300 KIAA2012Q0VF49 1180 aa16.77■□□□□ 0.28
HNRNPC-205ENST00000553300 HACL1Q9UJ83 578 aa16.77■□□□□ 0.28
HNRNPC-205ENST00000553300 TAF1P21675 1872 aa16.77■□□□□ 0.28
HNRNPC-205ENST00000553300 GCKRQ14397 625 aa16.77■□□□□ 0.27
HNRNPC-205ENST00000553300 AOC3Q16853 763 aa16.77■□□□□ 0.27
HNRNPC-205ENST00000553300 CWF19L2Q2TBE0 894 aaKnown RBP16.77■□□□□ 0.27
HNRNPC-205ENST00000553300 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.27
HNRNPC-205ENST00000553300 ZNRF3Q9ULT6 936 aa16.77■□□□□ 0.27
HNRNPC-205ENST00000553300 NSFL1CQ9UNZ2 370 aaKnown RBP16.77■□□□□ 0.27
HNRNPC-205ENST00000553300 LRRC37AA6NMS7 1700 aa16.76■□□□□ 0.27
HNRNPC-205ENST00000553300 H7C1W4 665 aa16.76■□□□□ 0.27
HNRNPC-205ENST00000553300 TAF1DQ9H5J8 278 aaPredicted RBP16.76■□□□□ 0.27
HNRNPC-205ENST00000553300 CTSWP56202 376 aa16.75■□□□□ 0.27
HNRNPC-205ENST00000553300 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
HNRNPC-205ENST00000553300 SLC51AQ86UW1 340 aa16.75■□□□□ 0.27
HNRNPC-205ENST00000553300 JARID2Q92833 1246 aaPredicted RBP16.75■□□□□ 0.27
HNRNPC-205ENST00000553300 CDC5LQ99459 802 aaKnown RBP16.75■□□□□ 0.27
HNRNPC-205ENST00000553300 EYA3Q99504 573 aa16.75■□□□□ 0.27
HNRNPC-205ENST00000553300 SEC31BQ9NQW1 1179 aa16.75■□□□□ 0.27
HNRNPC-205ENST00000553300 LMOD1P29536 600 aaPredicted RBP16.74■□□□□ 0.27
HNRNPC-205ENST00000553300 WASHC4Q2M389 1173 aa16.74■□□□□ 0.27
HNRNPC-205ENST00000553300 LDHDQ86WU2 507 aa16.74■□□□□ 0.27
HNRNPC-205ENST00000553300 ANKRD18AQ8IVF6 992 aa16.74■□□□□ 0.27
HNRNPC-205ENST00000553300 TTLL11Q8NHH1 800 aa16.74■□□□□ 0.27
HNRNPC-205ENST00000553300 PLA2G12BQ9BX93 195 aa16.74■□□□□ 0.27
HNRNPC-205ENST00000553300 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
HNRNPC-205ENST00000553300 GJA3Q9Y6H8 435 aa16.74■□□□□ 0.27
HNRNPC-205ENST00000553300 COL4A5P29400 1685 aa16.74■□□□□ 0.27
HNRNPC-205ENST00000553300 EPHX2P34913 555 aa16.73■□□□□ 0.27
HNRNPC-205ENST00000553300 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
HNRNPC-205ENST00000553300 TNIP1Q15025 636 aa16.73■□□□□ 0.27
HNRNPC-205ENST00000553300 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
HNRNPC-205ENST00000553300 MYH3P11055 1940 aa16.72■□□□□ 0.27
HNRNPC-205ENST00000553300 RTL9Q8NET4 1388 aa16.72■□□□□ 0.27
HNRNPC-205ENST00000553300 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
HNRNPC-205ENST00000553300 GPSM2P81274 684 aa16.72■□□□□ 0.27
HNRNPC-205ENST00000553300 ANKIB1Q9P2G1 1089 aa16.72■□□□□ 0.27
HNRNPC-205ENST00000553300 CXCL9Q07325 125 aa16.71■□□□□ 0.27
HNRNPC-205ENST00000553300 BEND3Q5T5X7 828 aa16.71■□□□□ 0.27
HNRNPC-205ENST00000553300 CIAPIN1Q6FI81 312 aa16.71■□□□□ 0.27
HNRNPC-205ENST00000553300 CCDC85AQ96PX6 553 aaPredicted RBP16.71■□□□□ 0.27
HNRNPC-205ENST00000553300 POLLQ9UGP5 575 aa16.71■□□□□ 0.27
HNRNPC-205ENST00000553300 F6X3S4 739 aa16.7■□□□□ 0.26
HNRNPC-205ENST00000553300 EAPPQ56P03 285 aaPredicted RBP16.7■□□□□ 0.26
HNRNPC-205ENST00000553300 TBC1D16Q8TBP0 767 aa16.7■□□□□ 0.26
HNRNPC-205ENST00000553300 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
HNRNPC-205ENST00000553300 BSDC1Q9NW68 430 aaPredicted RBP16.7■□□□□ 0.26
HNRNPC-205ENST00000553300 GGA1Q9UJY5 639 aa16.7■□□□□ 0.26
HNRNPC-205ENST00000553300 DUOX1Q9NRD9 1551 aa16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 ALDH1L1O75891 902 aa16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 CSF1RP07333 972 aa16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 SCNN1DP51172 638 aa16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 CASP7P55210 303 aa16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 USP50Q70EL3 339 aaPredicted RBP16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 DNAJC5GQ8N7S2 189 aa16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 GREM2Q9H772 168 aa16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 XDHP47989 1333 aa16.69■□□□□ 0.26
HNRNPC-205ENST00000553300 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
HNRNPC-205ENST00000553300 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
HNRNPC-205ENST00000553300 IGHMBP2P38935 993 aaKnown RBP16.68■□□□□ 0.26
HNRNPC-205ENST00000553300 DIEXFQ68CQ4 756 aaKnown RBP16.68■□□□□ 0.26
HNRNPC-205ENST00000553300 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
HNRNPC-205ENST00000553300 GPRC5DQ9NZD1 345 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms