RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.4
LETMD1-234ENST00000552645 CRY2Q49AN0 593 aa12.52□□□□□ -0.4
LETMD1-234ENST00000552645 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.4
LETMD1-234ENST00000552645 FTSJ3Q8IY81 847 aaKnown RBP12.52□□□□□ -0.4
LETMD1-234ENST00000552645 RBM17Q96I25 401 aaKnown RBP12.52□□□□□ -0.4
LETMD1-234ENST00000552645 H7C1W4 665 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 C21orf2O43822 256 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 PDE8AO60658 829 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 CCT4P50991 539 aaKnown RBP12.51□□□□□ -0.41
LETMD1-234ENST00000552645 ARHGAP27Q6ZUM4 889 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
LETMD1-234ENST00000552645 ARHGAP45Q92619 1136 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 CDHR2Q9BYE9 1310 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 CHMP3Q9Y3E7 222 aa12.51□□□□□ -0.41
LETMD1-234ENST00000552645 PLIN1O60240 522 aa12.5□□□□□ -0.41
LETMD1-234ENST00000552645 NBPF7P0C2Y1 421 aaPredicted RBP12.5□□□□□ -0.41
LETMD1-234ENST00000552645 CTSWP56202 376 aa12.5□□□□□ -0.41
LETMD1-234ENST00000552645 CCDC152Q4G0S7 254 aa12.5□□□□□ -0.41
LETMD1-234ENST00000552645 ABCC4O15439 1325 aa12.5□□□□□ -0.41
LETMD1-234ENST00000552645 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-234ENST00000552645 CASP7P55210 303 aa12.49□□□□□ -0.41
LETMD1-234ENST00000552645 OLFM4Q6UX06 510 aa12.49□□□□□ -0.41
LETMD1-234ENST00000552645 CHD4Q14839 1912 aa12.49□□□□□ -0.41
LETMD1-234ENST00000552645 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 PPEF1O14829 653 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-234ENST00000552645 SF3B3Q15393 1217 aaKnown RBP12.48□□□□□ -0.41
LETMD1-234ENST00000552645 DZIP1LQ8IYY4 767 aaKnown RBP12.48□□□□□ -0.41
LETMD1-234ENST00000552645 CRAMP1Q96RY5 1269 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 SEC31BQ9NQW1 1179 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 GRAPQ13588 217 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 SLC51AQ86UW1 340 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 ITPRIPQ8IWB1 547 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 TTLL11Q8NHH1 800 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 GRAPLQ8TC17 118 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-234ENST00000552645 USP44Q9H0E7 712 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 TMX4Q9H1E5 349 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-234ENST00000552645 GREM2Q9H772 168 aa12.48□□□□□ -0.41
LETMD1-234ENST00000552645 UBTFL1P0CB47 393 aaPredicted RBP12.47□□□□□ -0.41
LETMD1-234ENST00000552645 RLBP1P12271 317 aa12.47□□□□□ -0.41
LETMD1-234ENST00000552645 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
LETMD1-234ENST00000552645 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
LETMD1-234ENST00000552645 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
LETMD1-234ENST00000552645 PANK1Q8TE04 598 aa12.47□□□□□ -0.41
LETMD1-234ENST00000552645 CELF1Q92879 486 aaKnown RBP12.47□□□□□ -0.41
LETMD1-234ENST00000552645 SUCLG2Q96I99 432 aa12.47□□□□□ -0.41
LETMD1-234ENST00000552645 COL4A1P02462 1669 aa12.46□□□□□ -0.41
LETMD1-234ENST00000552645 FOXO4P98177 505 aa12.46□□□□□ -0.41
LETMD1-234ENST00000552645 RASSF7Q02833 373 aa12.46□□□□□ -0.41
LETMD1-234ENST00000552645 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.41
LETMD1-234ENST00000552645 MEIS3Q99687 375 aa12.46□□□□□ -0.41
LETMD1-234ENST00000552645 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.42
LETMD1-234ENST00000552645 BBOX1O75936 387 aa12.45□□□□□ -0.42
LETMD1-234ENST00000552645 ITGA6P23229 1130 aa12.45□□□□□ -0.42
LETMD1-234ENST00000552645 RPS8P62241 208 aaKnown RBP12.45□□□□□ -0.42
LETMD1-234ENST00000552645 CCDC93Q567U6 631 aa12.45□□□□□ -0.42
LETMD1-234ENST00000552645 SOGA3Q5TF21 947 aa12.45□□□□□ -0.42
LETMD1-234ENST00000552645 ANKRD18AQ8IVF6 992 aa12.45□□□□□ -0.42
LETMD1-234ENST00000552645 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.45□□□□□ -0.42
LETMD1-234ENST00000552645 IPO9Q96P70 1041 aaKnown RBP12.45□□□□□ -0.42
LETMD1-234ENST00000552645 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
LETMD1-234ENST00000552645 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
LETMD1-234ENST00000552645 SBF1O95248 1867 aa12.45□□□□□ -0.42
LETMD1-234ENST00000552645 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
LETMD1-234ENST00000552645 IFIT5Q13325 482 aaKnown RBP12.44□□□□□ -0.42
LETMD1-234ENST00000552645 NBR1Q14596 966 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 CCDC57Q2TAC2 916 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 TAF7LQ5H9L4 462 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 C7orf43Q8WVR3 580 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 KAZALD1Q96I82 304 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 CDC5LQ99459 802 aaKnown RBP12.44□□□□□ -0.42
LETMD1-234ENST00000552645 UTYO14607 1347 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 ANKRD18BA2A2Z9 1011 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 CSF1RP07333 972 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 GNAI3P08754 354 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 MS4A1P11836 297 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 ATP6V0A2Q9Y487 856 aa12.44□□□□□ -0.42
LETMD1-234ENST00000552645 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
LETMD1-234ENST00000552645 NFKBIEO00221 500 aa12.43□□□□□ -0.42
LETMD1-234ENST00000552645 IGHMBP2P38935 993 aaKnown RBP12.43□□□□□ -0.42
LETMD1-234ENST00000552645 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
LETMD1-234ENST00000552645 MPHOSPH8Q99549 860 aa12.43□□□□□ -0.42
LETMD1-234ENST00000552645 TAOK3Q9H2K8 898 aa12.43□□□□□ -0.42
LETMD1-234ENST00000552645 COG6Q9Y2V7 657 aa12.43□□□□□ -0.42
LETMD1-234ENST00000552645 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
LETMD1-234ENST00000552645 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
LETMD1-234ENST00000552645 ZNF594Q96JF6 807 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-234ENST00000552645 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
LETMD1-234ENST00000552645 HDAC5Q9UQL6 1122 aa12.42□□□□□ -0.42
LETMD1-234ENST00000552645 RTL9Q8NET4 1388 aa12.42□□□□□ -0.42
LETMD1-234ENST00000552645 C9orf131Q5VYM1 1079 aa12.41□□□□□ -0.42
LETMD1-234ENST00000552645 CC2D2BQ6DHV5 1058 aa12.41□□□□□ -0.42
LETMD1-234ENST00000552645 DPP8Q6V1X1 898 aaPredicted RBP12.41□□□□□ -0.42
LETMD1-234ENST00000552645 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
LETMD1-234ENST00000552645 MPNDQ8N594 471 aa12.41□□□□□ -0.42
LETMD1-234ENST00000552645 ANKRD44Q8N8A2 993 aa12.41□□□□□ -0.42
LETMD1-234ENST00000552645 C1orf115Q9H7X2 142 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms