RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 WIPF1O43516 503 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 PSME1Q06323 249 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 TLR1Q15399 786 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 WDR44Q5JSH3 913 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 TMEM214Q6NUQ4 689 aaKnown RBP8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 TAS1R3Q7RTX0 852 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 TRIM50Q86XT4 487 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 DCAF11Q8TEB1 546 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 FHDC1Q9C0D6 1143 aaPredicted RBP8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 TFIP11Q9UBB9 837 aaKnown RBP8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 AMOTL2Q9Y2J4 779 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 NALCNQ8IZF0 1738 aa8.05□□□□□ -1.12
SMARCC2-213ENST00000552627 WASLO00401 505 aaPredicted RBP8.04□□□□□ -1.12
SMARCC2-213ENST00000552627 GNASQ5JWF2 1037 aa8.04□□□□□ -1.12
SMARCC2-213ENST00000552627 TMEM132EQ6IEE7 984 aa8.04□□□□□ -1.12
SMARCC2-213ENST00000552627 SERTAD1Q9UHV2 236 aa8.04□□□□□ -1.12
SMARCC2-213ENST00000552627 DYRK1BQ9Y463 629 aa8.04□□□□□ -1.12
SMARCC2-213ENST00000552627 PIK3R4Q99570 1358 aa8.04□□□□□ -1.12
SMARCC2-213ENST00000552627 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 ROBO2Q9HCK4 1378 aa8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 PIP4K2BP78356 416 aa8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 CFAP70Q5T0N1 1121 aa8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 VWA5B2Q8N398 1253 aa8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 NANOS1Q8WY41 292 aaKnown RBP8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 ZMYND15Q9H091 742 aa8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 TIMMDC1Q9NPL8 285 aa8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 STK26Q9P289 416 aa8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 KNDC1Q76NI1 1749 aa8.03□□□□□ -1.12
SMARCC2-213ENST00000552627 CDC14CA4D256 554 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 PALM3A6NDB9 673 aaPredicted RBP8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 TMEM229AB2RXF0 380 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 PHKA2P46019 1235 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 ATP1A2P50993 1020 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 SMTNP53814 917 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 RIPOR1Q6ZS17 1223 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 SV2AQ7L0J3 742 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 C14orf37Q86TY3 774 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 SLC4A9Q96Q91 983 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 GAS2L1Q99501 681 aaPredicted RBP8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 PPP1R12CQ9BZL4 782 aa8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 MKRN1Q9UHC7 482 aaKnown RBP8.02□□□□□ -1.13
SMARCC2-213ENST00000552627 ADGRB1O14514 1584 aa8.01□□□□□ -1.13
SMARCC2-213ENST00000552627 BACH1O14867 736 aa8.01□□□□□ -1.13
SMARCC2-213ENST00000552627 GPR161Q8N6U8 529 aaKnown RBP8.01□□□□□ -1.13
SMARCC2-213ENST00000552627 RHBDD1Q8TEB9 315 aa8.01□□□□□ -1.13
SMARCC2-213ENST00000552627 L3MBTL2Q969R5 705 aa8.01□□□□□ -1.13
SMARCC2-213ENST00000552627 MAFBQ9Y5Q3 323 aaPredicted RBP8.01□□□□□ -1.13
SMARCC2-213ENST00000552627 PTCH1Q13635 1447 aa8.01□□□□□ -1.13
SMARCC2-213ENST00000552627 YTHDC2Q9H6S0 1430 aaKnown RBP8.01□□□□□ -1.13
SMARCC2-213ENST00000552627 MSH6P52701 1360 aa8□□□□□ -1.13
SMARCC2-213ENST00000552627 PLEKHH1Q9ULM0 1364 aa8□□□□□ -1.13
SMARCC2-213ENST00000552627 ROBO1Q9Y6N7 1651 aa8□□□□□ -1.13
SMARCC2-213ENST00000552627 A6NJY4 79 aa8□□□□□ -1.13
SMARCC2-213ENST00000552627 INSM1Q01101 510 aaPredicted RBP8□□□□□ -1.13
SMARCC2-213ENST00000552627 C4orf17Q53FE4 359 aa8□□□□□ -1.13
SMARCC2-213ENST00000552627 OGFOD1Q8N543 542 aa8□□□□□ -1.13
SMARCC2-213ENST00000552627 SERBP1Q8NC51 408 aaKnown RBP eCLIP8□□□□□ -1.13
SMARCC2-213ENST00000552627 C14orf93Q9H972 538 aaKnown RBP8□□□□□ -1.13
SMARCC2-213ENST00000552627 DNAAF2Q9NVR5 837 aaKnown RBP8□□□□□ -1.13
SMARCC2-213ENST00000552627 CUEDC1Q9NWM3 386 aaPredicted RBP8□□□□□ -1.13
SMARCC2-213ENST00000552627 PRAG1Q86YV5 1406 aa8□□□□□ -1.13
SMARCC2-213ENST00000552627 TRPM1Q7Z4N2 1603 aa8□□□□□ -1.13
SMARCC2-213ENST00000552627 LRPPRCP42704 1394 aaKnown RBP7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 H7C1W4 665 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 ZBTB7BO15156 539 aaPredicted RBP7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 TOM1O60784 492 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 F11P03951 625 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 CLDN10P78369 228 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 WAPLQ7Z5K2 1190 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 TRIM22Q8IYM9 498 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 ARHGEF28Q8N1W1 1705 aaKnown RBP7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 LARGE2Q8N3Y3 721 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 GMCL1Q96IK5 515 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 ZNF358Q9NW07 568 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 KIAA1210Q9ULL0 1709 aa7.99□□□□□ -1.13
SMARCC2-213ENST00000552627 TECPR2O15040 1411 aa7.98□□□□□ -1.13
SMARCC2-213ENST00000552627 ADGRL3Q9HAR2 1447 aa7.98□□□□□ -1.13
SMARCC2-213ENST00000552627 A0A1B0GTH6 734 aa7.98□□□□□ -1.13
SMARCC2-213ENST00000552627 CDK2AP1O14519 115 aa7.98□□□□□ -1.13
SMARCC2-213ENST00000552627 CCDC102BQ68D86 513 aa7.98□□□□□ -1.13
SMARCC2-213ENST00000552627 TPCN2Q8NHX9 752 aa7.98□□□□□ -1.13
SMARCC2-213ENST00000552627 NIFKQ9BYG3 293 aaKnown RBP7.98□□□□□ -1.13
SMARCC2-213ENST00000552627 KIAA1024Q9UPX6 916 aa7.98□□□□□ -1.13
SMARCC2-213ENST00000552627 RASA1P20936 1047 aa7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 LMOD1P29536 600 aaPredicted RBP7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 SAFB2Q14151 953 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 MTFR1Q15390 333 aa7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 DBN1Q16643 649 aa7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 NBPF1Q3BBV0 1214 aa7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 FOXR1Q6PIV2 292 aa7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 RBM19Q9Y4C8 960 aaKnown RBP7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 TONSLQ96HA7 1378 aa7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 ABCC11Q96J66 1382 aa7.97□□□□□ -1.13
SMARCC2-213ENST00000552627 NCOA3Q9Y6Q9 1424 aa7.96□□□□□ -1.13
SMARCC2-213ENST00000552627 ATF3P18847 181 aa7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 HSPA1LP34931 641 aa7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 CCER1Q8TC90 406 aaPredicted RBP7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 ZNF837Q96EG3 531 aaPredicted RBP7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 ZNF594Q96JF6 807 aaPredicted RBP7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 PRAM1Q96QH2 718 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms