RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 GALNT12Q8IXK2 581 aa6.15□□□□□ -1.42
LSM6P2-201ENST00000552208 AIDAQ96BJ3 306 aa6.15□□□□□ -1.42
LSM6P2-201ENST00000552208 TSEN34Q9BSV6 310 aaKnown RBP6.15□□□□□ -1.42
LSM6P2-201ENST00000552208 TMEM63CQ9P1W3 806 aa6.15□□□□□ -1.42
LSM6P2-201ENST00000552208 PDZRN3Q9UPQ7 1066 aa6.15□□□□□ -1.42
LSM6P2-201ENST00000552208 FNDC3AQ9Y2H6 1198 aaKnown RBP6.15□□□□□ -1.42
LSM6P2-201ENST00000552208 UBAP1LF5GYI3 381 aa6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 EGFRP00533 1210 aa6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 FGRP09769 529 aa6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 USP17L7P0C7H9 530 aa6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 TATP17735 454 aaPredicted RBP6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 GTF2F1P35269 517 aaKnown RBP eCLIP6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 CTSOP43234 321 aaPredicted RBP6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 PHKA2P46019 1235 aa6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 NBPF10Q6P3W6 841 aaKnown RBP6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 ZNF438Q7Z4V0 828 aa6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 C11orf16Q9NQ32 467 aa6.14□□□□□ -1.43
LSM6P2-201ENST00000552208 PHACTR2O75167 634 aa6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 ATF4P18848 351 aaPredicted RBP6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 POU4F2Q12837 409 aa6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 NXPE4Q6UWF7 544 aa6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 CYP4X1Q8N118 509 aa6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 CMTR1Q8N1G2 835 aaKnown RBP6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 BCO2Q9BYV7 579 aa6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 NPHS2Q9NP85 383 aa6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 COPRSQ9NQ92 184 aa6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 CNTN3Q9P232 1028 aa6.13□□□□□ -1.43
LSM6P2-201ENST00000552208 TTC24A2A3L6 582 aaPredicted RBP6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 EREGO14944 169 aa6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 POLR3DP05423 398 aaPredicted RBP6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 VEGFBP49765 207 aa6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 MAP3K10Q02779 954 aa6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 TYRO3Q06418 890 aa6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 LRRC69Q6ZNQ3 347 aa6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 C1orf127Q8N9H9 656 aa6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 RNF217Q8TC41 542 aa6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 RASGRP4Q8TDF6 673 aa6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 SUV39H2Q9H5I1 410 aa6.12□□□□□ -1.43
LSM6P2-201ENST00000552208 TLDC2A0PJX2 215 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 XYLBO75191 536 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 MSX1P28360 303 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 PAK2Q13177 524 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 GRM2Q14416 872 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 SOGA3Q5TF21 947 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 KIAA0319Q5VV43 1072 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 BICDL1Q6ZP65 573 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 VPS37DQ86XT2 251 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 LINC00528Q8N1L1 170 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 C3orf58Q8NDZ4 430 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 GLIS3Q8NEA6 775 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 ANKRD24Q8TF21 1146 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 HPS1Q92902 700 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 RSRP1Q9BUV0 290 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 NOC4LQ9BVI4 516 aaKnown RBP6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 HIRIP3Q9BW71 556 aaPredicted RBP6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 PIF1Q9H611 641 aa6.11□□□□□ -1.43
LSM6P2-201ENST00000552208 TRIM67Q6ZTA4 783 aa6.1□□□□□ -1.43
LSM6P2-201ENST00000552208 PMEPA1Q969W9 287 aa6.1□□□□□ -1.43
LSM6P2-201ENST00000552208 GPRASP2Q96D09 838 aa6.1□□□□□ -1.43
LSM6P2-201ENST00000552208 POLMQ9NP87 494 aaPredicted RBP6.1□□□□□ -1.43
LSM6P2-201ENST00000552208 ABI2Q9NYB9 513 aaPredicted RBP6.1□□□□□ -1.43
LSM6P2-201ENST00000552208 TBX22Q9Y458 520 aa6.1□□□□□ -1.43
LSM6P2-201ENST00000552208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.1□□□□□ -1.43
LSM6P2-201ENST00000552208 A0A1B0GTH6 734 aa6.09□□□□□ -1.43
LSM6P2-201ENST00000552208 A0A1W2PNR3 127 aa6.09□□□□□ -1.43
LSM6P2-201ENST00000552208 SUZ12Q15022 739 aaKnown RBP6.09□□□□□ -1.43
LSM6P2-201ENST00000552208 PEAR1Q5VY43 1037 aaPredicted RBP6.09□□□□□ -1.43
LSM6P2-201ENST00000552208 PRICKLE2Q7Z3G6 844 aa6.09□□□□□ -1.43
LSM6P2-201ENST00000552208 NLRP13Q86W25 1043 aa6.09□□□□□ -1.43
LSM6P2-201ENST00000552208 CRISPLD1Q9H336 500 aa6.09□□□□□ -1.43
LSM6P2-201ENST00000552208 KBTBD4Q9NVX7 518 aa6.09□□□□□ -1.43
LSM6P2-201ENST00000552208 GADD45BO75293 160 aaPredicted RBP6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 EPB42P16452 691 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 CDK11BP21127 795 aaKnown RBP6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 GSTT1P30711 240 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 KCNQ4P56696 695 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 INSM1Q01101 510 aaPredicted RBP6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 CTC1Q2NKJ3 1217 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 ARSJQ5FYB0 599 aaPredicted RBP6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 SAMD5Q5TGI4 173 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 PRPF40BQ6NWY9 871 aaKnown RBP6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 ZNF662Q6ZS27 426 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 LYSMD3Q7Z3D4 306 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 SEC16BQ96JE7 1060 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 ZCCHC2Q9C0B9 1178 aaKnown RBP6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 NEUROD4Q9HD90 331 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 TIMMDC1Q9NPL8 285 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 ADAMTS1Q9UHI8 967 aa6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 CDK11AQ9UQ88 783 aaPredicted RBP6.08□□□□□ -1.44
LSM6P2-201ENST00000552208 A0A1W2PP55 124 aa6.07□□□□□ -1.44
LSM6P2-201ENST00000552208 TNFRSF10AO00220 468 aa6.07□□□□□ -1.44
LSM6P2-201ENST00000552208 CES1P23141 567 aa6.07□□□□□ -1.44
LSM6P2-201ENST00000552208 ZNF746Q6NUN9 644 aaPredicted RBP6.07□□□□□ -1.44
LSM6P2-201ENST00000552208 PMFBP1Q8TBY8 1022 aa6.07□□□□□ -1.44
LSM6P2-201ENST00000552208 CEP63Q96MT8 703 aa6.07□□□□□ -1.44
LSM6P2-201ENST00000552208 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.07□□□□□ -1.44
LSM6P2-201ENST00000552208 OSBPL2Q9H1P3 480 aa6.07□□□□□ -1.44
LSM6P2-201ENST00000552208 KCNQ5Q9NR82 932 aa6.07□□□□□ -1.44
LSM6P2-201ENST00000552208 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms