RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 EAF2Q96CJ1 260 aaPredicted RBP11.41□□□□□ -0.58
GNE-206ENST00000543356 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.58
GNE-206ENST00000543356 IL15P40933 162 aaPredicted RBP11.4□□□□□ -0.58
GNE-206ENST00000543356 ATG9AQ7Z3C6 839 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 GPR108Q9NPR9 543 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.4□□□□□ -0.58
GNE-206ENST00000543356 EYA2O00167 538 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 PDE8AO60658 829 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 KCNQ4P56696 695 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 TFCP2Q12800 502 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 CCDC57Q2TAC2 916 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 TNNI3KQ59H18 835 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 SUSD4Q5VX71 490 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 UTP14AQ9BVJ6 771 aaKnown RBP11.4□□□□□ -0.58
GNE-206ENST00000543356 ZMYND15Q9H091 742 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 FPGT-TNNI3KV9GXZ4 949 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 SH3TC1Q8TE82 1336 aa11.4□□□□□ -0.58
GNE-206ENST00000543356 ZNF609O15014 1411 aa11.39□□□□□ -0.59
GNE-206ENST00000543356 CASZ1Q86V15 1759 aa11.39□□□□□ -0.59
GNE-206ENST00000543356 TRIM6-TRIM34B2RNG4 842 aa11.39□□□□□ -0.59
GNE-206ENST00000543356 NTSR2O95665 410 aa11.39□□□□□ -0.59
GNE-206ENST00000543356 HSP90B1P14625 803 aaKnown RBP11.39□□□□□ -0.59
GNE-206ENST00000543356 CNTROBQ8N137 903 aa11.39□□□□□ -0.59
GNE-206ENST00000543356 TTLL11Q8NHH1 800 aa11.39□□□□□ -0.59
GNE-206ENST00000543356 NARFQ9UHQ1 456 aa11.39□□□□□ -0.59
GNE-206ENST00000543356 NIP7Q9Y221 180 aaKnown RBP eCLIP11.39□□□□□ -0.59
GNE-206ENST00000543356 UBR3Q6ZT12 1888 aa11.39□□□□□ -0.59
GNE-206ENST00000543356 GNPATO15228 680 aa11.38□□□□□ -0.59
GNE-206ENST00000543356 IFIT5Q13325 482 aaKnown RBP11.38□□□□□ -0.59
GNE-206ENST00000543356 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
GNE-206ENST00000543356 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
GNE-206ENST00000543356 RTL9Q8NET4 1388 aa11.38□□□□□ -0.59
GNE-206ENST00000543356 RILPL2Q969X0 211 aa11.38□□□□□ -0.59
GNE-206ENST00000543356 CCDC8Q9H0W5 538 aaPredicted RBP11.38□□□□□ -0.59
GNE-206ENST00000543356 TLR7Q9NYK1 1049 aaKnown RBP11.38□□□□□ -0.59
GNE-206ENST00000543356 RTCBQ9Y3I0 505 aaKnown RBP11.38□□□□□ -0.59
GNE-206ENST00000543356 CHMLP26374 656 aa11.37□□□□□ -0.59
GNE-206ENST00000543356 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
GNE-206ENST00000543356 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
GNE-206ENST00000543356 RGPD3A6NKT7 1758 aaPredicted RBP11.37□□□□□ -0.59
GNE-206ENST00000543356 RGPD4Q7Z3J3 1758 aa11.37□□□□□ -0.59
GNE-206ENST00000543356 ANKRD18BA2A2Z9 1011 aa11.37□□□□□ -0.59
GNE-206ENST00000543356 REC8O95072 547 aa11.37□□□□□ -0.59
GNE-206ENST00000543356 HMGB2P26583 209 aaKnown RBP11.37□□□□□ -0.59
GNE-206ENST00000543356 LRRC24Q50LG9 513 aa11.37□□□□□ -0.59
GNE-206ENST00000543356 GREM2Q9H772 168 aa11.37□□□□□ -0.59
GNE-206ENST00000543356 BCL2L12Q9HB09 334 aa11.37□□□□□ -0.59
GNE-206ENST00000543356 DBNLQ9UJU6 430 aaKnown RBP11.37□□□□□ -0.59
GNE-206ENST00000543356 ITGA6P23229 1130 aa11.36□□□□□ -0.59
GNE-206ENST00000543356 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
GNE-206ENST00000543356 ARAP2Q8WZ64 1704 aa11.36□□□□□ -0.59
GNE-206ENST00000543356 ESYT1Q9BSJ8 1104 aa11.36□□□□□ -0.59
GNE-206ENST00000543356 TAOK2Q9UL54 1235 aa11.36□□□□□ -0.59
GNE-206ENST00000543356 TNS1Q9HBL0 1735 aaKnown RBP11.36□□□□□ -0.59
GNE-206ENST00000543356 ADRA2BP18089 450 aa11.36□□□□□ -0.59
GNE-206ENST00000543356 ATP5JP18859 108 aa11.36□□□□□ -0.59
GNE-206ENST00000543356 LRRC4BQ9NT99 713 aa11.36□□□□□ -0.59
GNE-206ENST00000543356 SPEF2Q9C093 1822 aa11.36□□□□□ -0.59
GNE-206ENST00000543356 TRIM37O94972 964 aa11.35□□□□□ -0.59
GNE-206ENST00000543356 USPL1Q5W0Q7 1092 aa11.35□□□□□ -0.59
GNE-206ENST00000543356 EVI5LQ96CN4 794 aa11.35□□□□□ -0.59
GNE-206ENST00000543356 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
GNE-206ENST00000543356 ZPR1O75312 459 aa11.35□□□□□ -0.59
GNE-206ENST00000543356 RXRBP28702 533 aa11.35□□□□□ -0.59
GNE-206ENST00000543356 USP26Q9BXU7 913 aa11.35□□□□□ -0.59
GNE-206ENST00000543356 RFX7Q2KHR2 1363 aa11.35□□□□□ -0.59
GNE-206ENST00000543356 EPB41L2O43491 1005 aaKnown RBP11.34□□□□□ -0.59
GNE-206ENST00000543356 MAP4K4O95819 1239 aaPredicted RBP11.34□□□□□ -0.59
GNE-206ENST00000543356 TBC1D9BQ66K14 1250 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
GNE-206ENST00000543356 CCDC85AQ96PX6 553 aaPredicted RBP11.34□□□□□ -0.59
GNE-206ENST00000543356 DBNDD2Q9BQY9 259 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 CEP126Q9P2H0 1117 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 AKAP2Q9Y2D5 859 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
GNE-206ENST00000543356 BECN1Q14457 450 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 CCDC152Q4G0S7 254 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 AMIGO3Q86WK7 504 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 NYXQ9GZU5 481 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
GNE-206ENST00000543356 RIPOR2Q9Y4F9 1068 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 ABCC12Q96J65 1359 aa11.34□□□□□ -0.59
GNE-206ENST00000543356 TRAPPC3LQ5T215 181 aa11.33□□□□□ -0.6
GNE-206ENST00000543356 FBXO41Q8TF61 875 aa11.33□□□□□ -0.6
GNE-206ENST00000543356 A0A1B0GUL7 405 aa11.33□□□□□ -0.6
GNE-206ENST00000543356 FAM177BA6PVY3 158 aa11.33□□□□□ -0.6
GNE-206ENST00000543356 HIP1O00291 1037 aa11.33□□□□□ -0.6
GNE-206ENST00000543356 SLC10A5Q5PT55 438 aa11.33□□□□□ -0.6
GNE-206ENST00000543356 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.33□□□□□ -0.6
GNE-206ENST00000543356 KIF2CQ99661 725 aa11.33□□□□□ -0.6
GNE-206ENST00000543356 A0A1B0GUL6 1792 aa11.33□□□□□ -0.6
GNE-206ENST00000543356 RFC4P35249 363 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 SMIM5Q71RC9 77 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 SETDB2Q96T68 719 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 HAUS7Q99871 368 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 MROH5Q6ZUA9 1318 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 SSFA2P28290 1259 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 VGLL2Q8N8G2 317 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms