RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 OLFM4Q6UX06 510 aa12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 RRAGCQ9HB90 399 aa12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 FANCIQ9NVI1 1328 aa12.5□□□□□ -0.41
TNFRSF1A-214ENST00000543048 TIAM2Q8IVF5 1701 aa12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 DDX60Q8IY21 1712 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 CCER2I3L3R5 266 aa12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 TCERG1O14776 1098 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 BBOX1O75936 387 aa12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 KSR2Q6VAB6 950 aa12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 ZNF428Q96B54 188 aa12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 MYD88Q99836 296 aa12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 METTL22Q9BUU2 404 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 TMX4Q9H1E5 349 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 MYH16Q9H6N6 1097 aa12.49□□□□□ -0.41
TNFRSF1A-214ENST00000543048 MAP3K2Q9Y2U5 619 aa12.48□□□□□ -0.41
TNFRSF1A-214ENST00000543048 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 IRS4O14654 1257 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 TOMM70O94826 608 aa12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 HSP90B1P14625 803 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 SF3B3Q15393 1217 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 G2E3Q7L622 706 aa12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 SP8Q8IXZ3 490 aa12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 ZBTB38Q8NAP3 1195 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 PSMD1Q99460 953 aa12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 ZNF277Q9NRM2 450 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 CWC25Q9NXE8 425 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 ATP6V0A2Q9Y487 856 aa12.47□□□□□ -0.41
TNFRSF1A-214ENST00000543048 ABCC4O15439 1325 aa12.46□□□□□ -0.41
TNFRSF1A-214ENST00000543048 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
TNFRSF1A-214ENST00000543048 PCCAP05165 728 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-214ENST00000543048 VEGFAP15692 232 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-214ENST00000543048 NEXNQ0ZGT2 675 aa12.46□□□□□ -0.41
TNFRSF1A-214ENST00000543048 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-214ENST00000543048 DIEXFQ68CQ4 756 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-214ENST00000543048 MYH3P11055 1940 aa12.45□□□□□ -0.42
TNFRSF1A-214ENST00000543048 ZNF521Q96K83 1311 aa12.45□□□□□ -0.42
TNFRSF1A-214ENST00000543048 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-214ENST00000543048 GRAPQ13588 217 aa12.45□□□□□ -0.42
TNFRSF1A-214ENST00000543048 TMC4Q7Z404 712 aa12.45□□□□□ -0.42
TNFRSF1A-214ENST00000543048 GRAPLQ8TC17 118 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF1A-214ENST00000543048 IGKV5-2P06315 115 aa12.44□□□□□ -0.42
TNFRSF1A-214ENST00000543048 FLIIQ13045 1269 aa12.44□□□□□ -0.42
TNFRSF1A-214ENST00000543048 RBM46Q8TBY0 533 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-214ENST00000543048 JDP2Q8WYK2 163 aa12.44□□□□□ -0.42
TNFRSF1A-214ENST00000543048 JARID2Q92833 1246 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-214ENST00000543048 VPS33BQ9H267 617 aa12.44□□□□□ -0.42
TNFRSF1A-214ENST00000543048 WDR90Q96KV7 1748 aa12.44□□□□□ -0.42
TNFRSF1A-214ENST00000543048 POTECB2RU33 542 aa12.43□□□□□ -0.42
TNFRSF1A-214ENST00000543048 PDE8AO60658 829 aa12.43□□□□□ -0.42
TNFRSF1A-214ENST00000543048 DDNO94850 711 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1A-214ENST00000543048 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
TNFRSF1A-214ENST00000543048 FKBP5Q13451 457 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1A-214ENST00000543048 MPNDQ8N594 471 aa12.43□□□□□ -0.42
TNFRSF1A-214ENST00000543048 SUPT20HQ8NEM7 779 aa12.43□□□□□ -0.42
TNFRSF1A-214ENST00000543048 SCN4AP35499 1836 aa12.43□□□□□ -0.42
TNFRSF1A-214ENST00000543048 SNED1Q8TER0 1413 aa12.43□□□□□ -0.42
TNFRSF1A-214ENST00000543048 E9PSI1 815 aa12.42□□□□□ -0.42
TNFRSF1A-214ENST00000543048 FZD9O00144 591 aa12.42□□□□□ -0.42
TNFRSF1A-214ENST00000543048 RPS8P62241 208 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1A-214ENST00000543048 EVX2Q03828 476 aa12.42□□□□□ -0.42
TNFRSF1A-214ENST00000543048 DPP8Q6V1X1 898 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-214ENST00000543048 LARGE2Q8N3Y3 721 aa12.42□□□□□ -0.42
TNFRSF1A-214ENST00000543048 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
TNFRSF1A-214ENST00000543048 RTFDC1Q9BY42 306 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF1A-214ENST00000543048 CDHR2Q9BYE9 1310 aa12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 NEURL1BA8MQ27 555 aa12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 H7C1W4 665 aa12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 HSPA6P17066 643 aa12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 SLFN5Q08AF3 891 aa12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 FSTL1Q12841 308 aa12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 CWF19L2Q2TBE0 894 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 CCDC152Q4G0S7 254 aa12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 CELF1Q92879 486 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-214ENST00000543048 EIF6P56537 245 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-214ENST00000543048 GCKRQ14397 625 aa12.4□□□□□ -0.42
TNFRSF1A-214ENST00000543048 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
TNFRSF1A-214ENST00000543048 LINS1Q8NG48 757 aa12.4□□□□□ -0.42
TNFRSF1A-214ENST00000543048 IQCA1LA6NCM1 817 aa12.39□□□□□ -0.43
TNFRSF1A-214ENST00000543048 PPIP5K2O43314 1243 aa12.39□□□□□ -0.43
TNFRSF1A-214ENST00000543048 NIM1KQ8IY84 436 aa12.39□□□□□ -0.43
TNFRSF1A-214ENST00000543048 GPC2Q8N158 579 aa12.39□□□□□ -0.43
TNFRSF1A-214ENST00000543048 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
TNFRSF1A-214ENST00000543048 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-214ENST00000543048 SEC31BQ9NQW1 1179 aa12.39□□□□□ -0.43
TNFRSF1A-214ENST00000543048 ZNF541Q9H0D2 1346 aa12.38□□□□□ -0.43
TNFRSF1A-214ENST00000543048 LRRC37AA6NMS7 1700 aa12.38□□□□□ -0.43
TNFRSF1A-214ENST00000543048 F6X3S4 739 aa12.38□□□□□ -0.43
TNFRSF1A-214ENST00000543048 AOC3Q16853 763 aa12.38□□□□□ -0.43
TNFRSF1A-214ENST00000543048 UBE3BQ7Z3V4 1068 aa12.38□□□□□ -0.43
TNFRSF1A-214ENST00000543048 TRMT2AQ8IZ69 625 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-214ENST00000543048 TTLL11Q8NHH1 800 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms