RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 CBX8Q9HC52 389 aa19.71■□□□□ 0.75
PDCD2-208ENST00000541970 DACT1Q9NYF0 836 aa19.71■□□□□ 0.75
PDCD2-208ENST00000541970 USP27XA6NNY8 438 aa19.71■□□□□ 0.75
PDCD2-208ENST00000541970 CASTP20810 708 aaKnown RBP19.71■□□□□ 0.75
PDCD2-208ENST00000541970 USP16Q9Y5T5 823 aa19.71■□□□□ 0.75
PDCD2-208ENST00000541970 MORC2Q9Y6X9 1032 aaPredicted RBP19.71■□□□□ 0.75
PDCD2-208ENST00000541970 BEND3Q5T5X7 828 aa19.7■□□□□ 0.74
PDCD2-208ENST00000541970 ZNF496Q96IT1 587 aaPredicted RBP19.7■□□□□ 0.74
PDCD2-208ENST00000541970 IL25Q9H293 177 aa19.7■□□□□ 0.74
PDCD2-208ENST00000541970 GOLGA6L19H0YKK7 550 aa19.7■□□□□ 0.74
PDCD2-208ENST00000541970 PRPF40BQ6NWY9 871 aaKnown RBP19.7■□□□□ 0.74
PDCD2-208ENST00000541970 TMX1Q9H3N1 280 aa19.7■□□□□ 0.74
PDCD2-208ENST00000541970 BICC1Q9H694 974 aaKnown RBP19.7■□□□□ 0.74
PDCD2-208ENST00000541970 FOSBP53539 338 aa19.69■□□□□ 0.74
PDCD2-208ENST00000541970 EDC3Q96F86 508 aaKnown RBP19.69■□□□□ 0.74
PDCD2-208ENST00000541970 RPAP1Q9BWH6 1393 aaPredicted RBP19.69■□□□□ 0.74
PDCD2-208ENST00000541970 ZBTB3Q9H5J0 574 aa19.69■□□□□ 0.74
PDCD2-208ENST00000541970 PPFIA3O75145 1194 aa19.69■□□□□ 0.74
PDCD2-208ENST00000541970 ZNF165P49910 485 aa19.69■□□□□ 0.74
PDCD2-208ENST00000541970 KSR2Q6VAB6 950 aa19.69■□□□□ 0.74
PDCD2-208ENST00000541970 PEAK1Q9H792 1746 aa19.68■□□□□ 0.74
PDCD2-208ENST00000541970 LARGE1O95461 756 aa19.68■□□□□ 0.74
PDCD2-208ENST00000541970 ZNF790Q6PG37 636 aa19.68■□□□□ 0.74
PDCD2-208ENST00000541970 MRVI1Q9Y6F6 885 aa19.68■□□□□ 0.74
PDCD2-208ENST00000541970 CEBPZQ03701 1054 aaKnown RBP19.68■□□□□ 0.74
PDCD2-208ENST00000541970 SUCLG2Q96I99 432 aa19.68■□□□□ 0.74
PDCD2-208ENST00000541970 FUCA2Q9BTY2 467 aa19.68■□□□□ 0.74
PDCD2-208ENST00000541970 LIMCH1Q9UPQ0 1083 aa19.68■□□□□ 0.74
PDCD2-208ENST00000541970 SSH2Q76I76 1423 aa19.68■□□□□ 0.74
PDCD2-208ENST00000541970 ANAPC15P60006 121 aa19.67■□□□□ 0.74
PDCD2-208ENST00000541970 SETD1AO15047 1707 aaKnown RBP19.67■□□□□ 0.74
PDCD2-208ENST00000541970 ZNF75DP51815 510 aa19.67■□□□□ 0.74
PDCD2-208ENST00000541970 STK3Q13188 491 aa19.67■□□□□ 0.74
PDCD2-208ENST00000541970 CCDC144BQ3MJ40 725 aa19.67■□□□□ 0.74
PDCD2-208ENST00000541970 HSP90AB4PQ58FF6 505 aa19.67■□□□□ 0.74
PDCD2-208ENST00000541970 CCDC144CPQ8IYA2 1237 aa19.67■□□□□ 0.74
PDCD2-208ENST00000541970 C3P01024 1663 aa19.67■□□□□ 0.74
PDCD2-208ENST00000541970 GRM8O00222 908 aa19.67■□□□□ 0.74
PDCD2-208ENST00000541970 HNRNPH2P55795 449 aaKnown RBP19.67■□□□□ 0.74
PDCD2-208ENST00000541970 NEK11Q8NG66 645 aa19.67■□□□□ 0.74
PDCD2-208ENST00000541970 JAKMIP1Q96N16 626 aaKnown RBP19.67■□□□□ 0.74
PDCD2-208ENST00000541970 SKILP12757 684 aa19.66■□□□□ 0.74
PDCD2-208ENST00000541970 LARP1BQ659C4 914 aaKnown RBP19.66■□□□□ 0.74
PDCD2-208ENST00000541970 A0A087WWV3 80 aa19.66■□□□□ 0.74
PDCD2-208ENST00000541970 CAPN2P17655 700 aa19.66■□□□□ 0.74
PDCD2-208ENST00000541970 KRT85P78386 507 aa19.66■□□□□ 0.74
PDCD2-208ENST00000541970 SSH3Q8TE77 659 aa19.66■□□□□ 0.74
PDCD2-208ENST00000541970 BECN2A8MW95 431 aa19.66■□□□□ 0.74
PDCD2-208ENST00000541970 RUFY3Q7L099 469 aa19.66■□□□□ 0.74
PDCD2-208ENST00000541970 A0A087WZG4 1122 aa19.65■□□□□ 0.74
PDCD2-208ENST00000541970 KIF24Q5T7B8 1368 aa19.65■□□□□ 0.74
PDCD2-208ENST00000541970 RASEFQ8IZ41 740 aa19.65■□□□□ 0.74
PDCD2-208ENST00000541970 ERCC6LQ2NKX8 1250 aa19.65■□□□□ 0.74
PDCD2-208ENST00000541970 TTC6Q86TZ1 520 aa19.65■□□□□ 0.74
PDCD2-208ENST00000541970 TMEM87AQ8NBN3 555 aa19.65■□□□□ 0.74
PDCD2-208ENST00000541970 MON2Q7Z3U7 1717 aa19.65■□□□□ 0.74
PDCD2-208ENST00000541970 IFNL2Q8IZJ0 200 aa19.64■□□□□ 0.74
PDCD2-208ENST00000541970 HYPKQ9NX55 129 aa19.64■□□□□ 0.74
PDCD2-208ENST00000541970 RAB11FIP3O75154 756 aa19.64■□□□□ 0.73
PDCD2-208ENST00000541970 ANKRD13DQ6ZTN6 518 aa19.64■□□□□ 0.73
PDCD2-208ENST00000541970 RBM6P78332 1123 aaKnown RBP19.63■□□□□ 0.73
PDCD2-208ENST00000541970 TLR7Q9NYK1 1049 aaKnown RBP19.63■□□□□ 0.73
PDCD2-208ENST00000541970 SNX14Q9Y5W7 946 aa19.63■□□□□ 0.73
PDCD2-208ENST00000541970 GLRX3O76003 335 aaKnown RBP19.63■□□□□ 0.73
PDCD2-208ENST00000541970 SPATA32Q96LK8 384 aa19.63■□□□□ 0.73
PDCD2-208ENST00000541970 ECHDC1Q9NTX5 307 aa19.63■□□□□ 0.73
PDCD2-208ENST00000541970 MTMR6Q9Y217 621 aa19.63■□□□□ 0.73
PDCD2-208ENST00000541970 NPHP4O75161 1426 aaPredicted RBP19.63■□□□□ 0.73
PDCD2-208ENST00000541970 TMEM94Q12767 1356 aa19.62■□□□□ 0.73
PDCD2-208ENST00000541970 FAM227BQ96M60 508 aa19.62■□□□□ 0.73
PDCD2-208ENST00000541970 ERBB3P21860 1342 aa19.62■□□□□ 0.73
PDCD2-208ENST00000541970 RAD50Q92878 1312 aa19.62■□□□□ 0.73
PDCD2-208ENST00000541970 SLU7O95391 586 aaKnown RBP19.61■□□□□ 0.73
PDCD2-208ENST00000541970 LARP1Q6PKG0 1096 aaKnown RBP19.61■□□□□ 0.73
PDCD2-208ENST00000541970 HOMER1Q86YM7 354 aa19.61■□□□□ 0.73
PDCD2-208ENST00000541970 RUFY2Q8WXA3 655 aa19.61■□□□□ 0.73
PDCD2-208ENST00000541970 DDX21Q9NR30 783 aaKnown RBP eCLIP19.61■□□□□ 0.73
PDCD2-208ENST00000541970 PDRG1Q9NUG6 133 aa19.61■□□□□ 0.73
PDCD2-208ENST00000541970 HSP90B1P14625 803 aaKnown RBP19.61■□□□□ 0.73
PDCD2-208ENST00000541970 LINS1Q8NG48 757 aa19.61■□□□□ 0.73
PDCD2-208ENST00000541970 A1BGP04217 495 aa19.6■□□□□ 0.73
PDCD2-208ENST00000541970 ZKSCAN1P17029 563 aaPredicted RBP19.6■□□□□ 0.73
PDCD2-208ENST00000541970 HSPA4P34932 840 aa19.6■□□□□ 0.73
PDCD2-208ENST00000541970 IRX3P78415 501 aaPredicted RBP19.6■□□□□ 0.73
PDCD2-208ENST00000541970 TAF7LQ5H9L4 462 aa19.6■□□□□ 0.73
PDCD2-208ENST00000541970 C10orf67Q8IYJ2 551 aa19.6■□□□□ 0.73
PDCD2-208ENST00000541970 ANKARQ7Z5J8 1434 aa19.6■□□□□ 0.73
PDCD2-208ENST00000541970 CCDC69A6NI79 296 aa19.6■□□□□ 0.73
PDCD2-208ENST00000541970 BMS1Q14692 1282 aaKnown RBP19.6■□□□□ 0.73
PDCD2-208ENST00000541970 SYCP1Q15431 976 aa19.6■□□□□ 0.73
PDCD2-208ENST00000541970 CDC37L1Q7L3B6 337 aa19.6■□□□□ 0.73
PDCD2-208ENST00000541970 FER1L4A9Z1Z3 1794 aa19.6■□□□□ 0.73
PDCD2-208ENST00000541970 EAF2Q96CJ1 260 aaPredicted RBP19.59■□□□□ 0.73
PDCD2-208ENST00000541970 ERO1AQ96HE7 468 aa19.59■□□□□ 0.73
PDCD2-208ENST00000541970 SLC52A2Q9HAB3 445 aa19.59■□□□□ 0.73
PDCD2-208ENST00000541970 HDAC5Q9UQL6 1122 aa19.59■□□□□ 0.73
PDCD2-208ENST00000541970 NRKQ7Z2Y5 1582 aa19.59■□□□□ 0.73
PDCD2-208ENST00000541970 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
PDCD2-208ENST00000541970 TEX35Q5T0J7 233 aa19.59■□□□□ 0.73
PDCD2-208ENST00000541970 PTH1RQ03431 593 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms