RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	RTKN2	Q8IZC4	609 aa		24.94	■■□□□ 1.58
ARF3-208	ENST00000541959	ABCC4	O15439	1325 aa		24.93	■■□□□ 1.58
ARF3-208	ENST00000541959	PPEF1	O14829	653 aa	Predicted RBP	24.93	■■□□□ 1.58
ARF3-208	ENST00000541959	FKBP4	Q02790	459 aa	Known RBP eCLIP	24.93	■■□□□ 1.58
ARF3-208	ENST00000541959	UBE3B	Q7Z3V4	1068 aa		24.93	■■□□□ 1.58
ARF3-208	ENST00000541959	GCKR	Q14397	625 aa		24.92	■■□□□ 1.58
ARF3-208	ENST00000541959	CCDC85A	Q96PX6	553 aa	Predicted RBP	24.92	■■□□□ 1.58
ARF3-208	ENST00000541959	TMX4	Q9H1E5	349 aa	Predicted RBP	24.92	■■□□□ 1.58
ARF3-208	ENST00000541959	PDE8A	O60658	829 aa		24.91	■■□□□ 1.58
ARF3-208	ENST00000541959	DPY19L2	Q6NUT2	758 aa		24.91	■■□□□ 1.58
ARF3-208	ENST00000541959	PTPRC	P08575	1304 aa		24.9	■■□□□ 1.58
ARF3-208	ENST00000541959	CDHR2	Q9BYE9	1310 aa		24.9	■■□□□ 1.58
ARF3-208	ENST00000541959	TAF1	P21675	1872 aa		24.9	■■□□□ 1.58
ARF3-208	ENST00000541959	BEND3	Q5T5X7	828 aa		24.9	■■□□□ 1.58
ARF3-208	ENST00000541959	CC2D2B	Q6DHV5	1058 aa		24.9	■■□□□ 1.58
ARF3-208	ENST00000541959	C16orf71	Q8IYS4	520 aa	Predicted RBP	24.9	■■□□□ 1.58
ARF3-208	ENST00000541959	GRAP	Q13588	217 aa		24.89	■■□□□ 1.58
ARF3-208	ENST00000541959	SF3B3	Q15393	1217 aa	Known RBP	24.89	■■□□□ 1.58
ARF3-208	ENST00000541959	GRAPL	Q8TC17	118 aa	Predicted RBP	24.89	■■□□□ 1.58
ARF3-208	ENST00000541959	SRCIN1	Q9C0H9	1055 aa		24.89	■■□□□ 1.58
ARF3-208	ENST00000541959	ZNF277	Q9NRM2	450 aa	Predicted RBP	24.89	■■□□□ 1.58
ARF3-208	ENST00000541959	RARS	P54136	660 aa	Known RBP	24.88	■■□□□ 1.57
ARF3-208	ENST00000541959	CCDC152	Q4G0S7	254 aa		24.88	■■□□□ 1.57
ARF3-208	ENST00000541959	SNED1	Q8TER0	1413 aa		24.87	■■□□□ 1.57
ARF3-208	ENST00000541959		H7C1W4	665 aa		24.87	■■□□□ 1.57
ARF3-208	ENST00000541959	SLC51A	Q86UW1	340 aa		24.87	■■□□□ 1.57
ARF3-208	ENST00000541959	BBOX1	O75936	387 aa		24.86	■■□□□ 1.57
ARF3-208	ENST00000541959	VEGFA	P15692	232 aa	Predicted RBP	24.86	■■□□□ 1.57
ARF3-208	ENST00000541959	HSPA6	P17066	643 aa		24.86	■■□□□ 1.57
ARF3-208	ENST00000541959	RBM46	Q8TBY0	533 aa	Known RBP	24.86	■■□□□ 1.57
ARF3-208	ENST00000541959	PSMD1	Q99460	953 aa		24.86	■■□□□ 1.57
ARF3-208	ENST00000541959	C9orf78	Q9NZ63	289 aa	Predicted RBP	24.86	■■□□□ 1.57
ARF3-208	ENST00000541959	NOB1	Q9ULX3	412 aa	Known RBP	24.86	■■□□□ 1.57
ARF3-208	ENST00000541959	WDR90	Q96KV7	1748 aa		24.86	■■□□□ 1.57
ARF3-208	ENST00000541959	MYH3	P11055	1940 aa		24.85	■■□□□ 1.57
ARF3-208	ENST00000541959	CTSW	P56202	376 aa		24.85	■■□□□ 1.57
ARF3-208	ENST00000541959	GRIPAP1	Q4V328	841 aa		24.85	■■□□□ 1.57
ARF3-208	ENST00000541959	CELF1	Q92879	486 aa	Known RBP	24.85	■■□□□ 1.57
ARF3-208	ENST00000541959	SEC31B	Q9NQW1	1179 aa		24.85	■■□□□ 1.57
ARF3-208	ENST00000541959	ALDH1L1	O75891	902 aa		24.84	■■□□□ 1.57
ARF3-208	ENST00000541959	IARS	P41252	1262 aa	Known RBP	24.84	■■□□□ 1.57
ARF3-208	ENST00000541959	ATP6V0A2	Q9Y487	856 aa		24.84	■■□□□ 1.57
ARF3-208	ENST00000541959	POTEC	B2RU33	542 aa		24.83	■■□□□ 1.57
ARF3-208	ENST00000541959	CEP350	Q5VT06	3117 aa		24.82	■■□□□ 1.56
ARF3-208	ENST00000541959	GRM8	O00222	908 aa		24.82	■■□□□ 1.56
ARF3-208	ENST00000541959	DDN	O94850	711 aa	Predicted RBP	24.82	■■□□□ 1.56
ARF3-208	ENST00000541959	KIF16B	Q96L93	1317 aa		24.82	■■□□□ 1.56
ARF3-208	ENST00000541959	CASP7	P55210	303 aa		24.81	■■□□□ 1.56
ARF3-208	ENST00000541959	SP8	Q8IXZ3	490 aa		24.81	■■□□□ 1.56
ARF3-208	ENST00000541959	FRAT1	Q92837	279 aa	Predicted RBP	24.81	■■□□□ 1.56
ARF3-208	ENST00000541959	API5	Q9BZZ5	524 aa	Known RBP	24.81	■■□□□ 1.56
ARF3-208	ENST00000541959	CHMP3	Q9Y3E7	222 aa		24.81	■■□□□ 1.56
ARF3-208	ENST00000541959	BCAR3	O75815	825 aa		24.8	■■□□□ 1.56
ARF3-208	ENST00000541959	RPS8	P62241	208 aa	Known RBP	24.8	■■□□□ 1.56
ARF3-208	ENST00000541959	TMC4	Q7Z404	712 aa		24.8	■■□□□ 1.56
ARF3-208	ENST00000541959	TTLL11	Q8NHH1	800 aa		24.8	■■□□□ 1.56
ARF3-208	ENST00000541959	COL4A1	P02462	1669 aa		24.79	■■□□□ 1.56
ARF3-208	ENST00000541959	FSTL1	Q12841	308 aa		24.79	■■□□□ 1.56
ARF3-208	ENST00000541959	DPP8	Q6V1X1	898 aa	Predicted RBP	24.79	■■□□□ 1.56
ARF3-208	ENST00000541959	ANKRD18A	Q8IVF6	992 aa		24.79	■■□□□ 1.56
ARF3-208	ENST00000541959	MPND	Q8N594	471 aa		24.79	■■□□□ 1.56
ARF3-208	ENST00000541959	GREM2	Q9H772	168 aa		24.79	■■□□□ 1.56
ARF3-208	ENST00000541959	BRPF1	P55201	1214 aa	Predicted RBP	24.78	■■□□□ 1.56
ARF3-208	ENST00000541959	JDP2	Q8WYK2	163 aa		24.78	■■□□□ 1.56
ARF3-208	ENST00000541959	YTHDC1	Q96MU7	727 aa	Known RBP	24.78	■■□□□ 1.56
ARF3-208	ENST00000541959	CDC5L	Q99459	802 aa	Known RBP	24.78	■■□□□ 1.56
ARF3-208	ENST00000541959	PLA2G12B	Q9BX93	195 aa		24.78	■■□□□ 1.56
ARF3-208	ENST00000541959	SCN4A	P35499	1836 aa		24.77	■■□□□ 1.56
ARF3-208	ENST00000541959	FZD9	O00144	591 aa		24.77	■■□□□ 1.56
ARF3-208	ENST00000541959	IPO8	O15397	1037 aa	Known RBP	24.76	■■□□□ 1.55
ARF3-208	ENST00000541959	FAM161A	Q3B820	660 aa		24.76	■■□□□ 1.55
ARF3-208	ENST00000541959	SMC1B	Q8NDV3	1235 aa		24.76	■■□□□ 1.55
ARF3-208	ENST00000541959	SPEF2	Q9C093	1822 aa		24.76	■■□□□ 1.55
ARF3-208	ENST00000541959	ZNF541	Q9H0D2	1346 aa		24.76	■■□□□ 1.55
ARF3-208	ENST00000541959	CCT4	P50991	539 aa	Known RBP	24.75	■■□□□ 1.55
ARF3-208	ENST00000541959	LARGE2	Q8N3Y3	721 aa		24.75	■■□□□ 1.55
ARF3-208	ENST00000541959	NSFL1C	Q9UNZ2	370 aa	Known RBP	24.75	■■□□□ 1.55
ARF3-208	ENST00000541959	COL4A5	P29400	1685 aa		24.75	■■□□□ 1.55
ARF3-208	ENST00000541959	PPIP5K2	O43314	1243 aa		24.74	■■□□□ 1.55
ARF3-208	ENST00000541959	NBPF7	P0C2Y1	421 aa	Predicted RBP	24.74	■■□□□ 1.55
ARF3-208	ENST00000541959	ITGA6	P23229	1130 aa		24.74	■■□□□ 1.55
ARF3-208	ENST00000541959	SUPT20H	Q8NEM7	779 aa		24.74	■■□□□ 1.55
ARF3-208	ENST00000541959	SUCLG2	Q96I99	432 aa		24.74	■■□□□ 1.55
ARF3-208	ENST00000541959	L3MBTL3	Q96JM7	780 aa	Predicted RBP	24.74	■■□□□ 1.55
ARF3-208	ENST00000541959	LRRC37A	A6NMS7	1700 aa		24.73	■■□□□ 1.55
ARF3-208	ENST00000541959	IGHMBP2	P38935	993 aa	Known RBP	24.73	■■□□□ 1.55
ARF3-208	ENST00000541959	APLP1	P51693	650 aa		24.73	■■□□□ 1.55
ARF3-208	ENST00000541959	FOXO4	P98177	505 aa		24.73	■■□□□ 1.55
ARF3-208	ENST00000541959	EPHA10	Q5JZY3	1008 aa		24.73	■■□□□ 1.55
ARF3-208	ENST00000541959	LMBR1L	Q6UX01	489 aa		24.73	■■□□□ 1.55
ARF3-208	ENST00000541959	RTFDC1	Q9BY42	306 aa	Predicted RBP	24.73	■■□□□ 1.55
ARF3-208	ENST00000541959	VPS33B	Q9H267	617 aa		24.73	■■□□□ 1.55
ARF3-208	ENST00000541959	RTL9	Q8NET4	1388 aa		24.72	■■□□□ 1.55
ARF3-208	ENST00000541959	ANKRD18B	A2A2Z9	1011 aa		24.72	■■□□□ 1.55
ARF3-208	ENST00000541959	CSF1R	P07333	972 aa		24.72	■■□□□ 1.55
ARF3-208	ENST00000541959	GPSM2	P81274	684 aa		24.72	■■□□□ 1.55
ARF3-208	ENST00000541959	AOC3	Q16853	763 aa		24.72	■■□□□ 1.55
ARF3-208	ENST00000541959	ARHGAP45	Q92619	1136 aa		24.72	■■□□□ 1.55
ARF3-208	ENST00000541959	ANKIB1	Q9P2G1	1089 aa		24.72	■■□□□ 1.55
ARF3-208	ENST00000541959	IQCA1L	A6NCM1	817 aa		24.71	■■□□□ 1.55

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