RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ZNF34Q8IZ26 560 aa18.56■□□□□ 0.56
CLPTM1-202ENST00000541297 CASC1Q6TDU7 716 aa18.56■□□□□ 0.56
CLPTM1-202ENST00000541297 RBM25P49756 843 aaKnown RBP18.55■□□□□ 0.56
CLPTM1-202ENST00000541297 TNPO1Q92973 898 aaKnown RBP18.55■□□□□ 0.56
CLPTM1-202ENST00000541297 LY75O60449 1722 aa18.55■□□□□ 0.56
CLPTM1-202ENST00000541297 IRS4O14654 1257 aaPredicted RBP18.54■□□□□ 0.56
CLPTM1-202ENST00000541297 CCDC57Q2TAC2 916 aa18.54■□□□□ 0.56
CLPTM1-202ENST00000541297 LRRC24Q50LG9 513 aa18.54■□□□□ 0.56
CLPTM1-202ENST00000541297 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
CLPTM1-202ENST00000541297 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
CLPTM1-202ENST00000541297 TTC41PQ6P2S7 1318 aa18.54■□□□□ 0.56
CLPTM1-202ENST00000541297 SUSD4Q5VX71 490 aa18.53■□□□□ 0.56
CLPTM1-202ENST00000541297 NIP7Q9Y221 180 aaKnown RBP eCLIP18.53■□□□□ 0.56
CLPTM1-202ENST00000541297 BCORQ6W2J9 1755 aa18.53■□□□□ 0.56
CLPTM1-202ENST00000541297 SNX21Q969T3 373 aa18.53■□□□□ 0.56
CLPTM1-202ENST00000541297 GPATCH3Q96I76 525 aa18.53■□□□□ 0.56
CLPTM1-202ENST00000541297 PUS3Q9BZE2 481 aaKnown RBP18.53■□□□□ 0.56
CLPTM1-202ENST00000541297 CDHR2Q9BYE9 1310 aa18.53■□□□□ 0.56
CLPTM1-202ENST00000541297 USP42Q9H9J4 1324 aaKnown RBP18.53■□□□□ 0.56
CLPTM1-202ENST00000541297 ATG9AQ7Z3C6 839 aa18.52■□□□□ 0.56
CLPTM1-202ENST00000541297 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
CLPTM1-202ENST00000541297 PLA2G12BQ9BX93 195 aa18.52■□□□□ 0.56
CLPTM1-202ENST00000541297 CNTNAP4Q9C0A0 1308 aa18.52■□□□□ 0.56
CLPTM1-202ENST00000541297 GNPATO15228 680 aa18.52■□□□□ 0.56
CLPTM1-202ENST00000541297 GLRX3O76003 335 aaKnown RBP18.52■□□□□ 0.56
CLPTM1-202ENST00000541297 TNNI3KQ59H18 835 aa18.52■□□□□ 0.56
CLPTM1-202ENST00000541297 FPGT-TNNI3KV9GXZ4 949 aa18.52■□□□□ 0.56
CLPTM1-202ENST00000541297 ERC2O15083 957 aa18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 GAS2L3Q86XJ1 694 aa18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 GREM2Q9H772 168 aa18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 ESPNB1AK53 854 aa18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 CSF1RP07333 972 aa18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 HCLS1P14317 486 aaPredicted RBP18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 CTSWP56202 376 aa18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 TAF7LQ5H9L4 462 aa18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 TTLL11Q8NHH1 800 aa18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 DBNLQ9UJU6 430 aaKnown RBP18.51■□□□□ 0.55
CLPTM1-202ENST00000541297 EYA2O00167 538 aa18.5■□□□□ 0.55
CLPTM1-202ENST00000541297 TRIM37O94972 964 aa18.5■□□□□ 0.55
CLPTM1-202ENST00000541297 CHMLP26374 656 aa18.5■□□□□ 0.55
CLPTM1-202ENST00000541297 IFIT5Q13325 482 aaKnown RBP18.5■□□□□ 0.55
CLPTM1-202ENST00000541297 CNTROBQ8N137 903 aa18.5■□□□□ 0.55
CLPTM1-202ENST00000541297 ISY1Q9ULR0 285 aaKnown RBP18.5■□□□□ 0.55
CLPTM1-202ENST00000541297 ITGA6P23229 1130 aa18.49■□□□□ 0.55
CLPTM1-202ENST00000541297 BICDL1Q6ZP65 573 aa18.49■□□□□ 0.55
CLPTM1-202ENST00000541297 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
CLPTM1-202ENST00000541297 BOLA2Q9H3K6 86 aa18.49■□□□□ 0.55
CLPTM1-202ENST00000541297 ZNF652Q9Y2D9 606 aa18.49■□□□□ 0.55
CLPTM1-202ENST00000541297 IL15P40933 162 aaPredicted RBP18.49■□□□□ 0.55
CLPTM1-202ENST00000541297 DBNDD2Q9BQY9 259 aa18.49■□□□□ 0.55
CLPTM1-202ENST00000541297 FOXD4L1Q9NU39 408 aa18.49■□□□□ 0.55
CLPTM1-202ENST00000541297 SRP68Q9UHB9 627 aaKnown RBP18.49■□□□□ 0.55
CLPTM1-202ENST00000541297 SH3TC1Q8TE82 1336 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 PDE8AO60658 829 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 FAM196AQ6ZSG2 479 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 LRRC4BQ9NT99 713 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 PHF14O94880 888 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 HSP90AA1P07900 732 aaKnown RBP18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 TIMM10P62072 90 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 RAB3GAP1Q15042 981 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 RC3H1Q5TC82 1133 aaKnown RBP18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 ZNF772Q68DY9 489 aaPredicted RBP18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 GBP4Q96PP9 640 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 KIF2CQ99661 725 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 ESYT1Q9BSJ8 1104 aa18.48■□□□□ 0.55
CLPTM1-202ENST00000541297 C4BP0C0L5 1744 aa18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 RPS6KA4O75676 772 aa18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 USP26Q9BXU7 913 aa18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 CIZ1Q9ULV3 898 aaPredicted RBP18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 DDX60Q8IY21 1712 aaKnown RBP18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 RBM6P78332 1123 aaKnown RBP18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 IL25Q9H293 177 aa18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 RTCBQ9Y3I0 505 aaKnown RBP18.47■□□□□ 0.55
CLPTM1-202ENST00000541297 SCN7AQ01118 1682 aa18.46■□□□□ 0.55
CLPTM1-202ENST00000541297 NTSR2O95665 410 aa18.46■□□□□ 0.55
CLPTM1-202ENST00000541297 NDUFB9Q9Y6M9 179 aa18.46■□□□□ 0.55
CLPTM1-202ENST00000541297 REC8O95072 547 aa18.46■□□□□ 0.55
CLPTM1-202ENST00000541297 TRIM44Q96DX7 344 aaPredicted RBP18.46■□□□□ 0.55
CLPTM1-202ENST00000541297 ANKRD18BA2A2Z9 1011 aa18.45■□□□□ 0.54
CLPTM1-202ENST00000541297 CIAO1O76071 339 aa18.45■□□□□ 0.54
CLPTM1-202ENST00000541297 TBC1D9BQ66K14 1250 aa18.45■□□□□ 0.54
CLPTM1-202ENST00000541297 CLEC4GQ6UXB4 293 aa18.45■□□□□ 0.54
CLPTM1-202ENST00000541297 BCL2L12Q9HB09 334 aa18.45■□□□□ 0.54
CLPTM1-202ENST00000541297 LDHAL6AQ6ZMR3 332 aa18.44■□□□□ 0.54
CLPTM1-202ENST00000541297 EDC3Q96F86 508 aaKnown RBP18.44■□□□□ 0.54
CLPTM1-202ENST00000541297 ZPR1O75312 459 aa18.44■□□□□ 0.54
CLPTM1-202ENST00000541297 HSP90AA2PQ14568 343 aaPredicted RBP18.44■□□□□ 0.54
CLPTM1-202ENST00000541297 CWC27Q6UX04 472 aaKnown RBP18.44■□□□□ 0.54
CLPTM1-202ENST00000541297 ARHGEF1Q92888 912 aaKnown RBP18.44■□□□□ 0.54
CLPTM1-202ENST00000541297 ANO2Q9NQ90 1003 aa18.44■□□□□ 0.54
CLPTM1-202ENST00000541297 CEP126Q9P2H0 1117 aa18.44■□□□□ 0.54
CLPTM1-202ENST00000541297 NARFQ9UHQ1 456 aa18.44■□□□□ 0.54
CLPTM1-202ENST00000541297 A0A1B0GUL7 405 aa18.43■□□□□ 0.54
CLPTM1-202ENST00000541297 SKOR2Q2VWA4 1001 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms