RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
TSFM-207ENST00000540550 SPATA31A6Q5VVP1 1343 aa17.93■□□□□ 0.46
TSFM-207ENST00000540550 PALLDQ8WX93 1383 aa17.93■□□□□ 0.46
TSFM-207ENST00000540550 LRRC24Q50LG9 513 aa17.93■□□□□ 0.46
TSFM-207ENST00000540550 CWC22Q9HCG8 908 aaKnown RBP17.93■□□□□ 0.46
TSFM-207ENST00000540550 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
TSFM-207ENST00000540550 RFX7Q2KHR2 1363 aa17.93■□□□□ 0.46
TSFM-207ENST00000540550 BCL9LQ86UU0 1499 aa17.93■□□□□ 0.46
TSFM-207ENST00000540550 CRKLP46109 303 aaKnown RBP17.92■□□□□ 0.46
TSFM-207ENST00000540550 IFIT5Q13325 482 aaKnown RBP17.92■□□□□ 0.46
TSFM-207ENST00000540550 FAM227BQ96M60 508 aa17.92■□□□□ 0.46
TSFM-207ENST00000540550 GBP4Q96PP9 640 aa17.92■□□□□ 0.46
TSFM-207ENST00000540550 DNAJC2Q99543 621 aaKnown RBP17.92■□□□□ 0.46
TSFM-207ENST00000540550 HAUS7Q99871 368 aa17.92■□□□□ 0.46
TSFM-207ENST00000540550 CEP126Q9P2H0 1117 aa17.92■□□□□ 0.46
TSFM-207ENST00000540550 CCDC171Q6TFL3 1326 aa17.92■□□□□ 0.46
TSFM-207ENST00000540550 CSF1RP07333 972 aa17.92■□□□□ 0.46
TSFM-207ENST00000540550 INTS5Q6P9B9 1019 aaKnown RBP17.92■□□□□ 0.46
TSFM-207ENST00000540550 TNPO1Q92973 898 aaKnown RBP17.92■□□□□ 0.46
TSFM-207ENST00000540550 TRMT112Q9UI30 125 aaKnown RBP17.92■□□□□ 0.46
TSFM-207ENST00000540550 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
TSFM-207ENST00000540550 KCNJ4P48050 445 aa17.91■□□□□ 0.46
TSFM-207ENST00000540550 EIF5P55010 431 aaKnown RBP17.91■□□□□ 0.46
TSFM-207ENST00000540550 PTH1RQ03431 593 aa17.91■□□□□ 0.46
TSFM-207ENST00000540550 GSE1Q14687 1217 aa17.91■□□□□ 0.46
TSFM-207ENST00000540550 CCDC85AQ96PX6 553 aaPredicted RBP17.91■□□□□ 0.46
TSFM-207ENST00000540550 UPF3BQ9BZI7 483 aaKnown RBP17.91■□□□□ 0.46
TSFM-207ENST00000540550 A0A0D9SFI3 127 aa17.9■□□□□ 0.46
TSFM-207ENST00000540550 IRS4O14654 1257 aaPredicted RBP17.9■□□□□ 0.46
TSFM-207ENST00000540550 COL5A3P25940 1745 aaPredicted RBP17.9■□□□□ 0.46
TSFM-207ENST00000540550 NUCB2P80303 420 aa17.9■□□□□ 0.46
TSFM-207ENST00000540550 ZNF831Q5JPB2 1677 aa17.9■□□□□ 0.46
TSFM-207ENST00000540550 FNBP4Q8N3X1 1017 aaPredicted RBP17.9■□□□□ 0.46
TSFM-207ENST00000540550 TMX3Q96JJ7 454 aa17.9■□□□□ 0.46
TSFM-207ENST00000540550 PUS3Q9BZE2 481 aaKnown RBP17.9■□□□□ 0.46
TSFM-207ENST00000540550 SNRKQ9NRH2 765 aa17.9■□□□□ 0.46
TSFM-207ENST00000540550 AKAP2Q9Y2D5 859 aa17.9■□□□□ 0.46
TSFM-207ENST00000540550 CTSWP56202 376 aa17.9■□□□□ 0.46
TSFM-207ENST00000540550 EDC3Q96F86 508 aaKnown RBP17.9■□□□□ 0.46
TSFM-207ENST00000540550 SPEF2Q9C093 1822 aa17.89■□□□□ 0.46
TSFM-207ENST00000540550 MED23Q9ULK4 1368 aa17.89■□□□□ 0.45
TSFM-207ENST00000540550 MYH14Q7Z406 1995 aaKnown RBP17.89■□□□□ 0.45
TSFM-207ENST00000540550 A0A1B0GUL7 405 aa17.89■□□□□ 0.45
TSFM-207ENST00000540550 TIMM10P62072 90 aa17.89■□□□□ 0.45
TSFM-207ENST00000540550 ITPK1Q13572 414 aa17.89■□□□□ 0.45
TSFM-207ENST00000540550 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
TSFM-207ENST00000540550 ZNF34Q8IZ26 560 aa17.89■□□□□ 0.45
TSFM-207ENST00000540550 ANKRD18BA2A2Z9 1011 aa17.88■□□□□ 0.45
TSFM-207ENST00000540550 ZKSCAN1P17029 563 aaPredicted RBP17.88■□□□□ 0.45
TSFM-207ENST00000540550 NOL8Q76FK4 1167 aaKnown RBP17.88■□□□□ 0.45
TSFM-207ENST00000540550 RASEFQ8IZ41 740 aa17.88■□□□□ 0.45
TSFM-207ENST00000540550 SYNE4Q8N205 404 aa17.88■□□□□ 0.45
TSFM-207ENST00000540550 KCNQ2O43526 872 aa17.88■□□□□ 0.45
TSFM-207ENST00000540550 PDE8AO60658 829 aa17.88■□□□□ 0.45
TSFM-207ENST00000540550 TTLL11Q8NHH1 800 aa17.88■□□□□ 0.45
TSFM-207ENST00000540550 RBM8AQ9Y5S9 174 aaKnown RBP17.88■□□□□ 0.45
TSFM-207ENST00000540550 UBN2Q6ZU65 1347 aa17.87■□□□□ 0.45
TSFM-207ENST00000540550 ITGA6P23229 1130 aa17.87■□□□□ 0.45
TSFM-207ENST00000540550 SSFA2P28290 1259 aa17.87■□□□□ 0.45
TSFM-207ENST00000540550 GORABQ5T7V8 394 aa17.87■□□□□ 0.45
TSFM-207ENST00000540550 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
TSFM-207ENST00000540550 PAG1Q9NWQ8 432 aa17.87■□□□□ 0.45
TSFM-207ENST00000540550 NDUFB9Q9Y6M9 179 aa17.87■□□□□ 0.45
TSFM-207ENST00000540550 PTMSP20962 102 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 RNF20Q5VTR2 975 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 ZGPATQ8N5A5 531 aaKnown RBP17.86■□□□□ 0.45
TSFM-207ENST00000540550 MAP4K1Q92918 833 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 KCNB2Q92953 911 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 GREM2Q9H772 168 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 USP21Q9UK80 565 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 IFIT1P09914 478 aaKnown RBP17.86■□□□□ 0.45
TSFM-207ENST00000540550 CASTP20810 708 aaKnown RBP17.86■□□□□ 0.45
TSFM-207ENST00000540550 HSPA1LP34931 641 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 CUL4AQ13619 759 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 AK7Q96M32 723 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 BCORQ6W2J9 1755 aa17.86■□□□□ 0.45
TSFM-207ENST00000540550 GOLIM4O00461 696 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 CAMTA2O94983 1202 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 NECTIN1Q15223 517 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 PARP10Q53GL7 1025 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 METTL24Q5JXM2 366 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 TTC39AQ5SRH9 613 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 CREB3L3Q68CJ9 461 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 TICAM2Q86XR7 235 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.85■□□□□ 0.45
TSFM-207ENST00000540550 JAKMIP1Q96N16 626 aaKnown RBP17.85■□□□□ 0.45
TSFM-207ENST00000540550 TM6SF1Q9BZW5 370 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 CNNM1Q9NRU3 951 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 THSD7AQ9UPZ6 1657 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 SH3TC1Q8TE82 1336 aa17.85■□□□□ 0.45
TSFM-207ENST00000540550 RIC1Q4ADV7 1423 aa17.84■□□□□ 0.45
TSFM-207ENST00000540550 LDHAL6AQ6ZMR3 332 aa17.84■□□□□ 0.45
TSFM-207ENST00000540550 INTS4Q96HW7 963 aaKnown RBP17.84■□□□□ 0.45
TSFM-207ENST00000540550 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
TSFM-207ENST00000540550 LAMB2P55268 1798 aa17.84■□□□□ 0.45
TSFM-207ENST00000540550 MEX3CQ5U5Q3 659 aaKnown RBP17.84■□□□□ 0.45
TSFM-207ENST00000540550 TTC14Q96N46 770 aa17.84■□□□□ 0.45
TSFM-207ENST00000540550 ZNF652Q9Y2D9 606 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms