RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 CCDC191Q8NCU4 936 aa26.99■■□□□ 1.91
CHFR-217ENST00000540537 METTL22Q9BUU2 404 aaPredicted RBP26.99■■□□□ 1.91
CHFR-217ENST00000540537 STK31Q9BXU1 1019 aa26.99■■□□□ 1.91
CHFR-217ENST00000540537 HACL1Q9UJ83 578 aa26.99■■□□□ 1.91
CHFR-217ENST00000540537 PPIP5K2O43314 1243 aa26.98■■□□□ 1.91
CHFR-217ENST00000540537 POTEIP0CG38 1075 aa26.98■■□□□ 1.91
CHFR-217ENST00000540537 POTEJP0CG39 1038 aa26.98■■□□□ 1.91
CHFR-217ENST00000540537 HSP90B1P14625 803 aaKnown RBP26.98■■□□□ 1.91
CHFR-217ENST00000540537 RTL5Q5HYW3 569 aaPredicted RBP26.98■■□□□ 1.91
CHFR-217ENST00000540537 DPP8Q6V1X1 898 aaPredicted RBP26.98■■□□□ 1.91
CHFR-217ENST00000540537 WDR63Q8IWG1 891 aa26.98■■□□□ 1.91
CHFR-217ENST00000540537 NIM1KQ8IY84 436 aa26.98■■□□□ 1.91
CHFR-217ENST00000540537 MPNDQ8N594 471 aa26.98■■□□□ 1.91
CHFR-217ENST00000540537 LRRC37AA6NMS7 1700 aa26.98■■□□□ 1.91
CHFR-217ENST00000540537 LDHDQ86WU2 507 aa26.97■■□□□ 1.91
CHFR-217ENST00000540537 FANCIQ9NVI1 1328 aa26.96■■□□□ 1.91
CHFR-217ENST00000540537 AOC3Q16853 763 aa26.96■■□□□ 1.91
CHFR-217ENST00000540537 CWC25Q9NXE8 425 aaPredicted RBP26.96■■□□□ 1.91
CHFR-217ENST00000540537 PCCAP05165 728 aaPredicted RBP26.95■■□□□ 1.9
CHFR-217ENST00000540537 EPHX2P34913 555 aa26.95■■□□□ 1.9
CHFR-217ENST00000540537 KSR2Q6VAB6 950 aa26.95■■□□□ 1.9
CHFR-217ENST00000540537 KLRG1Q96E93 195 aa26.95■■□□□ 1.9
CHFR-217ENST00000540537 MAP3K2Q9Y2U5 619 aa26.95■■□□□ 1.9
CHFR-217ENST00000540537 CELF1Q92879 486 aaKnown RBP26.94■■□□□ 1.9
CHFR-217ENST00000540537 SALL2Q9Y467 1007 aaPredicted RBP26.94■■□□□ 1.9
CHFR-217ENST00000540537 GJA3Q9Y6H8 435 aa26.94■■□□□ 1.9
CHFR-217ENST00000540537 CACNA1FO60840 1977 aa26.93■■□□□ 1.9
CHFR-217ENST00000540537 PI4KAP2A4QPH2 592 aa26.93■■□□□ 1.9
CHFR-217ENST00000540537 PNMA8AQ86V59 439 aaPredicted RBP26.93■■□□□ 1.9
CHFR-217ENST00000540537 PI4KAP1Q8N8J0 262 aa26.93■■□□□ 1.9
CHFR-217ENST00000540537 ADAMTSL1Q8N6G6 1762 aa26.93■■□□□ 1.9
CHFR-217ENST00000540537 KIAA2012Q0VF49 1180 aa26.92■■□□□ 1.9
CHFR-217ENST00000540537 FAM9BQ8IZU0 186 aa26.92■■□□□ 1.9
CHFR-217ENST00000540537 DUOX1Q9NRD9 1551 aa26.92■■□□□ 1.9
CHFR-217ENST00000540537 EAPPQ56P03 285 aaPredicted RBP26.91■■□□□ 1.9
CHFR-217ENST00000540537 ZNRF3Q9ULT6 936 aa26.91■■□□□ 1.9
CHFR-217ENST00000540537 PDE8AO60658 829 aa26.9■■□□□ 1.9
CHFR-217ENST00000540537 SLC4A2P04920 1241 aa26.9■■□□□ 1.9
CHFR-217ENST00000540537 LMOD1P29536 600 aaPredicted RBP26.9■■□□□ 1.9
CHFR-217ENST00000540537 COL4A1P02462 1669 aa26.89■■□□□ 1.9
CHFR-217ENST00000540537 IGKV5-2P06315 115 aa26.89■■□□□ 1.9
CHFR-217ENST00000540537 RPS8P62241 208 aaKnown RBP26.89■■□□□ 1.9
CHFR-217ENST00000540537 NEXNQ0ZGT2 675 aa26.89■■□□□ 1.9
CHFR-217ENST00000540537 G2E3Q7L622 706 aa26.89■■□□□ 1.9
CHFR-217ENST00000540537 LTBP1Q14766 1721 aa26.89■■□□□ 1.9
CHFR-217ENST00000540537 CDHR2Q9BYE9 1310 aa26.89■■□□□ 1.89
CHFR-217ENST00000540537 SCNN1DP51172 638 aa26.88■■□□□ 1.89
CHFR-217ENST00000540537 CCDC152Q4G0S7 254 aa26.88■■□□□ 1.89
CHFR-217ENST00000540537 JMYQ8N9B5 988 aa26.88■■□□□ 1.89
CHFR-217ENST00000540537 VAMP4O75379 141 aa26.87■■□□□ 1.89
CHFR-217ENST00000540537 CLEC11AQ9Y240 323 aa26.87■■□□□ 1.89
CHFR-217ENST00000540537 PASKQ96RG2 1323 aa26.87■■□□□ 1.89
CHFR-217ENST00000540537 CXCL9Q07325 125 aa26.86■■□□□ 1.89
CHFR-217ENST00000540537 FLIIQ13045 1269 aa26.86■■□□□ 1.89
CHFR-217ENST00000540537 JARID2Q92833 1246 aaPredicted RBP26.86■■□□□ 1.89
CHFR-217ENST00000540537 CREBZFQ9NS37 354 aa26.86■■□□□ 1.89
CHFR-217ENST00000540537 NSFL1CQ9UNZ2 370 aaKnown RBP26.86■■□□□ 1.89
CHFR-217ENST00000540537 EXOSC9Q06265 439 aaKnown RBP26.85■■□□□ 1.89
CHFR-217ENST00000540537 MYH16Q9H6N6 1097 aa26.85■■□□□ 1.89
CHFR-217ENST00000540537 SEC31BQ9NQW1 1179 aa26.85■■□□□ 1.89
CHFR-217ENST00000540537 NEURL1BA8MQ27 555 aa26.84■■□□□ 1.89
CHFR-217ENST00000540537 ITGBL1O95965 494 aaPredicted RBP26.84■■□□□ 1.89
CHFR-217ENST00000540537 EPS15P42566 896 aa26.84■■□□□ 1.89
CHFR-217ENST00000540537 GPSM2P81274 684 aa26.84■■□□□ 1.89
CHFR-217ENST00000540537 CIAPIN1Q6FI81 312 aa26.84■■□□□ 1.89
CHFR-217ENST00000540537 SPINK5Q9NQ38 1064 aaPredicted RBP26.84■■□□□ 1.89
CHFR-217ENST00000540537 MYH3P11055 1940 aa26.84■■□□□ 1.89
CHFR-217ENST00000540537 WASHC4Q2M389 1173 aa26.83■■□□□ 1.89
CHFR-217ENST00000540537 CWF19L2Q2TBE0 894 aaKnown RBP26.83■■□□□ 1.89
CHFR-217ENST00000540537 TNIP1Q15025 636 aa26.82■■□□□ 1.88
CHFR-217ENST00000540537 USP50Q70EL3 339 aaPredicted RBP26.82■■□□□ 1.88
CHFR-217ENST00000540537 GPRC5DQ9NZD1 345 aa26.82■■□□□ 1.88
CHFR-217ENST00000540537 POLLQ9UGP5 575 aa26.82■■□□□ 1.88
CHFR-217ENST00000540537 CTSWP56202 376 aa26.81■■□□□ 1.88
CHFR-217ENST00000540537 FKBP5Q13451 457 aaPredicted RBP26.81■■□□□ 1.88
CHFR-217ENST00000540537 CNTROBQ8N137 903 aa26.81■■□□□ 1.88
CHFR-217ENST00000540537 EYA3Q99504 573 aa26.81■■□□□ 1.88
CHFR-217ENST00000540537 PODXL2Q9NZ53 605 aa26.81■■□□□ 1.88
CHFR-217ENST00000540537 YDJCA8MPS7 323 aa26.8■■□□□ 1.88
CHFR-217ENST00000540537 C6orf229H3BNL8 230 aa26.8■■□□□ 1.88
CHFR-217ENST00000540537 RAD17O75943 681 aa26.8■■□□□ 1.88
CHFR-217ENST00000540537 MAP1SQ66K74 1059 aaPredicted RBP26.8■■□□□ 1.88
CHFR-217ENST00000540537 TBC1D16Q8TBP0 767 aa26.8■■□□□ 1.88
CHFR-217ENST00000540537 DNAAF4Q8WXU2 420 aa26.8■■□□□ 1.88
CHFR-217ENST00000540537 CCDC85AQ96PX6 553 aaPredicted RBP26.8■■□□□ 1.88
CHFR-217ENST00000540537 H7C1W4 665 aa26.79■■□□□ 1.88
CHFR-217ENST00000540537 GMPSP49915 693 aaPredicted RBP26.79■■□□□ 1.88
CHFR-217ENST00000540537 ADARB2Q9NS39 739 aaKnown RBP26.79■■□□□ 1.88
CHFR-217ENST00000540537 ANKRD18AQ8IVF6 992 aa26.78■■□□□ 1.88
CHFR-217ENST00000540537 TTLL11Q8NHH1 800 aa26.78■■□□□ 1.88
CHFR-217ENST00000540537 CDC5LQ99459 802 aaKnown RBP26.78■■□□□ 1.88
CHFR-217ENST00000540537 ZNF521Q96K83 1311 aa26.78■■□□□ 1.88
CHFR-217ENST00000540537 RTL9Q8NET4 1388 aa26.77■■□□□ 1.88
CHFR-217ENST00000540537 GCKRQ14397 625 aa26.77■■□□□ 1.88
CHFR-217ENST00000540537 UBE3BQ7Z3V4 1068 aa26.77■■□□□ 1.88
CHFR-217ENST00000540537 LINS1Q8NG48 757 aa26.77■■□□□ 1.88
CHFR-217ENST00000540537 ANKIB1Q9P2G1 1089 aa26.77■■□□□ 1.88
CHFR-217ENST00000540537 PCNTO95613 3336 aa26.77■■□□□ 1.88
CHFR-217ENST00000540537 TMEM88BA6NKF7 163 aa26.76■■□□□ 1.87
CHFR-217ENST00000540537 RIMBP2O15034 1052 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms