RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GZF1Q9H116 711 aaPredicted RBP20.77■□□□□ 0.92
PCDHB17P-201ENST00000539533 GLRX3O76003 335 aaKnown RBP20.77■□□□□ 0.91
PCDHB17P-201ENST00000539533 RBM25P49756 843 aaKnown RBP20.77■□□□□ 0.91
PCDHB17P-201ENST00000539533 CCDC57Q2TAC2 916 aa20.77■□□□□ 0.91
PCDHB17P-201ENST00000539533 TRAK2O60296 914 aa20.76■□□□□ 0.91
PCDHB17P-201ENST00000539533 PUS3Q9BZE2 481 aaKnown RBP20.76■□□□□ 0.91
PCDHB17P-201ENST00000539533 BCL11BQ9C0K0 894 aaPredicted RBP20.76■□□□□ 0.91
PCDHB17P-201ENST00000539533 ERC2O15083 957 aa20.75■□□□□ 0.91
PCDHB17P-201ENST00000539533 TNNI3KQ59H18 835 aa20.75■□□□□ 0.91
PCDHB17P-201ENST00000539533 KRT27Q7Z3Y8 459 aa20.75■□□□□ 0.91
PCDHB17P-201ENST00000539533 GPATCH3Q96I76 525 aa20.75■□□□□ 0.91
PCDHB17P-201ENST00000539533 FPGT-TNNI3KV9GXZ4 949 aa20.75■□□□□ 0.91
PCDHB17P-201ENST00000539533 CHMLP26374 656 aa20.75■□□□□ 0.91
PCDHB17P-201ENST00000539533 TTLL11Q8NHH1 800 aa20.75■□□□□ 0.91
PCDHB17P-201ENST00000539533 NIP7Q9Y221 180 aaKnown RBP eCLIP20.75■□□□□ 0.91
PCDHB17P-201ENST00000539533 EYA2O00167 538 aa20.74■□□□□ 0.91
PCDHB17P-201ENST00000539533 RC3H1Q5TC82 1133 aaKnown RBP20.74■□□□□ 0.91
PCDHB17P-201ENST00000539533 BRWD3Q6RI45 1802 aa20.74■□□□□ 0.91
PCDHB17P-201ENST00000539533 IL15P40933 162 aaPredicted RBP20.73■□□□□ 0.91
PCDHB17P-201ENST00000539533 CTSWP56202 376 aa20.73■□□□□ 0.91
PCDHB17P-201ENST00000539533 GREM2Q9H772 168 aa20.73■□□□□ 0.91
PCDHB17P-201ENST00000539533 DBNLQ9UJU6 430 aaKnown RBP20.73■□□□□ 0.91
PCDHB17P-201ENST00000539533 LY75O60449 1722 aa20.73■□□□□ 0.91
PCDHB17P-201ENST00000539533 GNPATO15228 680 aa20.73■□□□□ 0.91
PCDHB17P-201ENST00000539533 IFIT5Q13325 482 aaKnown RBP20.73■□□□□ 0.91
PCDHB17P-201ENST00000539533 UTP14AQ9BVJ6 771 aaKnown RBP20.73■□□□□ 0.91
PCDHB17P-201ENST00000539533 USP26Q9BXU7 913 aa20.73■□□□□ 0.91
PCDHB17P-201ENST00000539533 PDE8AO60658 829 aa20.72■□□□□ 0.91
PCDHB17P-201ENST00000539533 RPS6KA4O75676 772 aa20.72■□□□□ 0.91
PCDHB17P-201ENST00000539533 FAM196AQ6ZSG2 479 aa20.72■□□□□ 0.91
PCDHB17P-201ENST00000539533 AMIGO3Q86WK7 504 aa20.72■□□□□ 0.91
PCDHB17P-201ENST00000539533 CNTROBQ8N137 903 aa20.72■□□□□ 0.91
PCDHB17P-201ENST00000539533 HCLS1P14317 486 aaPredicted RBP20.72■□□□□ 0.91
PCDHB17P-201ENST00000539533 ZNF652Q9Y2D9 606 aa20.72■□□□□ 0.91
PCDHB17P-201ENST00000539533 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
PCDHB17P-201ENST00000539533 DDX11L8A8MPP1 907 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 CIAO1O76071 339 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 ITGA6P23229 1130 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 DDIT3P35638 169 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 PARP10Q53GL7 1025 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 ZNF772Q68DY9 489 aaPredicted RBP20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 CLEC4GQ6UXB4 293 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 SNX21Q969T3 373 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 ESYT1Q9BSJ8 1104 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 TRIM37O94972 964 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 RBM6P78332 1123 aaKnown RBP20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 KIF2CQ99661 725 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 DBNDD2Q9BQY9 259 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 PANK2Q9BZ23 570 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 BOLA2Q9H3K6 86 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 LRRC4BQ9NT99 713 aa20.71■□□□□ 0.91
PCDHB17P-201ENST00000539533 AK9Q5TCS8 1911 aa20.7■□□□□ 0.9
PCDHB17P-201ENST00000539533 TAF7LQ5H9L4 462 aa20.7■□□□□ 0.9
PCDHB17P-201ENST00000539533 BCORQ6W2J9 1755 aa20.7■□□□□ 0.9
PCDHB17P-201ENST00000539533 NTSR2O95665 410 aa20.7■□□□□ 0.9
PCDHB17P-201ENST00000539533 TIMM10P62072 90 aa20.7■□□□□ 0.9
PCDHB17P-201ENST00000539533 BCL2L12Q9HB09 334 aa20.7■□□□□ 0.9
PCDHB17P-201ENST00000539533 SRP68Q9UHB9 627 aaKnown RBP20.7■□□□□ 0.9
PCDHB17P-201ENST00000539533 USPL1Q5W0Q7 1092 aa20.69■□□□□ 0.9
PCDHB17P-201ENST00000539533 NEUROD6Q96NK8 337 aa20.69■□□□□ 0.9
PCDHB17P-201ENST00000539533 IL25Q9H293 177 aa20.69■□□□□ 0.9
PCDHB17P-201ENST00000539533 RTCBQ9Y3I0 505 aaKnown RBP20.69■□□□□ 0.9
PCDHB17P-201ENST00000539533 TAF1LQ8IZX4 1826 aa20.69■□□□□ 0.9
PCDHB17P-201ENST00000539533 MYH3P11055 1940 aa20.69■□□□□ 0.9
PCDHB17P-201ENST00000539533 REC8O95072 547 aa20.68■□□□□ 0.9
PCDHB17P-201ENST00000539533 GLIPR1L2Q4G1C9 344 aa20.68■□□□□ 0.9
PCDHB17P-201ENST00000539533 BICDL1Q6ZP65 573 aa20.68■□□□□ 0.9
PCDHB17P-201ENST00000539533 NARFQ9UHQ1 456 aa20.68■□□□□ 0.9
PCDHB17P-201ENST00000539533 ANKRD18BA2A2Z9 1011 aa20.67■□□□□ 0.9
PCDHB17P-201ENST00000539533 MRE11P49959 708 aa20.67■□□□□ 0.9
PCDHB17P-201ENST00000539533 NAP1L5Q96NT1 182 aaPredicted RBP20.67■□□□□ 0.9
PCDHB17P-201ENST00000539533 ARHGEF1Q92888 912 aaKnown RBP20.67■□□□□ 0.9
PCDHB17P-201ENST00000539533 PKNOX2Q96KN3 472 aa20.67■□□□□ 0.9
PCDHB17P-201ENST00000539533 GPR108Q9NPR9 543 aa20.67■□□□□ 0.9
PCDHB17P-201ENST00000539533 CEP126Q9P2H0 1117 aa20.67■□□□□ 0.9
PCDHB17P-201ENST00000539533 FBXO3Q9UK99 471 aa20.67■□□□□ 0.9
PCDHB17P-201ENST00000539533 TBC1D9BQ66K14 1250 aa20.66■□□□□ 0.9
PCDHB17P-201ENST00000539533 EVI5LQ96CN4 794 aa20.66■□□□□ 0.9
PCDHB17P-201ENST00000539533 AK7Q96M32 723 aa20.66■□□□□ 0.9
PCDHB17P-201ENST00000539533 ATP5JP18859 108 aa20.66■□□□□ 0.9
PCDHB17P-201ENST00000539533 LDHAL6AQ6ZMR3 332 aa20.66■□□□□ 0.9
PCDHB17P-201ENST00000539533 A0A1B0GUL7 405 aa20.65■□□□□ 0.9
PCDHB17P-201ENST00000539533 PHF14O94880 888 aa20.65■□□□□ 0.9
PCDHB17P-201ENST00000539533 RIPOR2Q9Y4F9 1068 aa20.65■□□□□ 0.9
PCDHB17P-201ENST00000539533 C4BP0C0L5 1744 aa20.65■□□□□ 0.9
PCDHB17P-201ENST00000539533 ZPR1O75312 459 aa20.65■□□□□ 0.9
PCDHB17P-201ENST00000539533 NDUFB9Q9Y6M9 179 aa20.65■□□□□ 0.9
PCDHB17P-201ENST00000539533 CWC27Q6UX04 472 aaKnown RBP20.64■□□□□ 0.89
PCDHB17P-201ENST00000539533 EDC3Q96F86 508 aaKnown RBP20.64■□□□□ 0.89
PCDHB17P-201ENST00000539533 ANO2Q9NQ90 1003 aa20.64■□□□□ 0.89
PCDHB17P-201ENST00000539533 CIZ1Q9ULV3 898 aaPredicted RBP20.64■□□□□ 0.89
PCDHB17P-201ENST00000539533 ZNF609O15014 1411 aa20.64■□□□□ 0.89
PCDHB17P-201ENST00000539533 DDX60Q8IY21 1712 aaKnown RBP20.63■□□□□ 0.89
PCDHB17P-201ENST00000539533 ERFEQ4G0M1 354 aa20.63■□□□□ 0.89
PCDHB17P-201ENST00000539533 TNPO1Q92973 898 aaKnown RBP20.63■□□□□ 0.89
PCDHB17P-201ENST00000539533 SEC31BQ9NQW1 1179 aa20.63■□□□□ 0.89
PCDHB17P-201ENST00000539533 CNNM1Q9NRU3 951 aa20.63■□□□□ 0.89
PCDHB17P-201ENST00000539533 SCN7AQ01118 1682 aa20.63■□□□□ 0.89
PCDHB17P-201ENST00000539533 SGSM2O43147 1006 aa20.62■□□□□ 0.89
PCDHB17P-201ENST00000539533 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 1103.9 ms