RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 ALG1LQ6GMV1 187 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 PDE12Q6L8Q7 609 aaKnown RBP5.15□□□□□ -1.59
SNHG1-210ENST00000539303 XKR5Q6UX68 686 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 SNX29Q8TEQ0 813 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 CCDC74AQ96AQ1 378 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 ZNF837Q96EG3 531 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-210ENST00000539303 ABHD17AQ96GS6 310 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 NUCKS1Q9H1E3 243 aaKnown RBP5.15□□□□□ -1.59
SNHG1-210ENST00000539303 LATS2Q9NRM7 1088 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 ZFATQ9P243 1243 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 VTI1BQ9UEU0 232 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 KCNH4Q9UQ05 1017 aa5.15□□□□□ -1.59
SNHG1-210ENST00000539303 FNDC3AQ9Y2H6 1198 aaKnown RBP5.15□□□□□ -1.59
SNHG1-210ENST00000539303 SORBS3O60504 671 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 RPLP1P05386 114 aaKnown RBP5.14□□□□□ -1.59
SNHG1-210ENST00000539303 FAM157BP0CG42 384 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 MAPTP10636 758 aaKnown RBP5.14□□□□□ -1.59
SNHG1-210ENST00000539303 EPB42P16452 691 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 CD33P20138 364 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 GNA15P30679 374 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 HDLBPQ00341 1268 aaKnown RBP5.14□□□□□ -1.59
SNHG1-210ENST00000539303 TNP2Q05952 138 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 SLC30A3Q99726 388 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 OSBPL7Q9BZF2 842 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 GSX2Q9BZM3 304 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 DNAJC25Q9H1X3 360 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 MRS2Q9HD23 443 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 ABI2Q9NYB9 513 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-210ENST00000539303 PCDHGC4Q9Y5F7 938 aa5.14□□□□□ -1.59
SNHG1-210ENST00000539303 GPR25O00155 361 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 MMP20O60882 483 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 EGFRP00533 1210 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 ACPPP15309 386 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 NLRP13Q86W25 1043 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 TMEM87AQ8NBN3 555 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 FBF1Q8TES7 1133 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 GTPBP3Q969Y2 492 aaKnown RBP5.13□□□□□ -1.59
SNHG1-210ENST00000539303 TRIM47Q96LD4 638 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 NDFIP2Q9NV92 336 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 AK5Q9Y6K8 562 aa5.13□□□□□ -1.59
SNHG1-210ENST00000539303 POTECB2RU33 542 aa5.12□□□□□ -1.59
SNHG1-210ENST00000539303 NFKB1P19838 968 aa5.12□□□□□ -1.59
SNHG1-210ENST00000539303 ITGA6P23229 1130 aa5.12□□□□□ -1.59
SNHG1-210ENST00000539303 KCNQ4P56696 695 aa5.12□□□□□ -1.59
SNHG1-210ENST00000539303 COL13A1Q5TAT6 717 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-210ENST00000539303 NXPE4Q6UWF7 544 aa5.12□□□□□ -1.59
SNHG1-210ENST00000539303 TRIM22Q8IYM9 498 aa5.12□□□□□ -1.59
SNHG1-210ENST00000539303 TRPA1O75762 1119 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 RARAP10276 462 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 FANCCQ00597 558 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 RAD51AP2Q09MP3 1159 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 SPEM2Q0P670 501 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 CCINQ13939 588 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 LBRQ14739 615 aaKnown RBP5.11□□□□□ -1.59
SNHG1-210ENST00000539303 MEI1Q5TIA1 1274 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 TTC39BQ5VTQ0 682 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-210ENST00000539303 PEAR1Q5VY43 1037 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-210ENST00000539303 FIGNL1Q6PIW4 674 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 METTL16Q86W50 562 aaKnown RBP5.11□□□□□ -1.59
SNHG1-210ENST00000539303 GALNT12Q8IXK2 581 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 BHMTQ93088 406 aa5.11□□□□□ -1.59
SNHG1-210ENST00000539303 CDC14CA4D256 554 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 SCAMP3O14828 347 aaKnown RBP5.1□□□□□ -1.59
SNHG1-210ENST00000539303 PPFIA3O75145 1194 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 GADD45BO75293 160 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-210ENST00000539303 NEFLP07196 543 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 CES1P23141 567 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 VEGFBP49765 207 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 FGD1P98174 961 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 CTBSQ01459 385 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 GRM2Q14416 872 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 GLIS3Q8NEA6 775 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 OR13H1Q8NG92 308 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 CNTNAP3BQ96NU0 1288 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 BCO2Q9BYV7 579 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 CNTNAP3Q9BZ76 1288 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 C12orf49Q9H741 205 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 SENP2Q9HC62 589 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 MARK1Q9P0L2 795 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 SPG7Q9UQ90 795 aa5.1□□□□□ -1.59
SNHG1-210ENST00000539303 A0A1W2PP55 124 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 H7C1W4 665 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 USP17L7P0C7H9 530 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 FGFR3P22607 806 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 EIF4BP23588 611 aaKnown RBP5.09□□□□□ -1.59
SNHG1-210ENST00000539303 ERCC5P28715 1186 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-210ENST00000539303 MLLT1Q03111 559 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-210ENST00000539303 VWA5B2Q8N398 1253 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 KIFC2Q96AC6 838 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 CRELD1Q96HD1 420 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 NSUN5Q96P11 429 aaKnown RBP5.09□□□□□ -1.59
SNHG1-210ENST00000539303 HHIPQ96QV1 700 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 NLRP2Q9NX02 1062 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 SALL4Q9UJQ4 1053 aa5.09□□□□□ -1.59
SNHG1-210ENST00000539303 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-210ENST00000539303 ZBTB42B2RXF5 422 aa5.08□□□□□ -1.6
SNHG1-210ENST00000539303 C11orf95C9JLR9 678 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-210ENST00000539303 C2CD2LO14523 706 aa5.08□□□□□ -1.6
SNHG1-210ENST00000539303 Q6ZNB5 142 aa5.08□□□□□ -1.6
SNHG1-210ENST00000539303 HFE2Q6ZVN8 426 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms