RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
CLN6-202ENST00000538696 GNAI2P04899 355 aa21.55■■□□□ 1.04
CLN6-202ENST00000538696 HSP90B1P14625 803 aaKnown RBP21.55■■□□□ 1.04
CLN6-202ENST00000538696 BICC1Q9H694 974 aaKnown RBP21.55■■□□□ 1.04
CLN6-202ENST00000538696 KLRG2A4D1S0 409 aaPredicted RBP21.54■■□□□ 1.04
CLN6-202ENST00000538696 IGHDP01880 384 aa21.54■■□□□ 1.04
CLN6-202ENST00000538696 CENPQQ7L2Z9 268 aaPredicted RBP21.54■■□□□ 1.04
CLN6-202ENST00000538696 NLRP3Q96P20 1036 aa21.54■■□□□ 1.04
CLN6-202ENST00000538696 CHMP4BQ9H444 224 aaKnown RBP21.54■■□□□ 1.04
CLN6-202ENST00000538696 PDE6BP35913 854 aa21.53■■□□□ 1.04
CLN6-202ENST00000538696 SF3B3Q15393 1217 aaKnown RBP21.53■■□□□ 1.04
CLN6-202ENST00000538696 RABL6Q3YEC7 729 aaPredicted RBP21.53■■□□□ 1.04
CLN6-202ENST00000538696 CRY2Q49AN0 593 aa21.53■■□□□ 1.04
CLN6-202ENST00000538696 HDAC5Q9UQL6 1122 aa21.53■■□□□ 1.04
CLN6-202ENST00000538696 CSF1RP07333 972 aa21.52■■□□□ 1.03
CLN6-202ENST00000538696 KLHL34Q8N239 644 aa21.52■■□□□ 1.03
CLN6-202ENST00000538696 TTLL11Q8NHH1 800 aa21.52■■□□□ 1.03
CLN6-202ENST00000538696 CCDC85AQ96PX6 553 aaPredicted RBP21.52■■□□□ 1.03
CLN6-202ENST00000538696 LMBR1LQ6UX01 489 aa21.51■■□□□ 1.03
CLN6-202ENST00000538696 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
CLN6-202ENST00000538696 CD2APQ9Y5K6 639 aa21.51■■□□□ 1.03
CLN6-202ENST00000538696 RTL9Q8NET4 1388 aa21.5■■□□□ 1.03
CLN6-202ENST00000538696 CHRNA5P30532 468 aa21.5■■□□□ 1.03
CLN6-202ENST00000538696 FAM161AQ3B820 660 aa21.5■■□□□ 1.03
CLN6-202ENST00000538696 C2CD5Q86YS7 1000 aa21.5■■□□□ 1.03
CLN6-202ENST00000538696 GREM2Q9H772 168 aa21.5■■□□□ 1.03
CLN6-202ENST00000538696 PPP1R1BQ9UD71 204 aaPredicted RBP21.5■■□□□ 1.03
CLN6-202ENST00000538696 SRGNP10124 158 aa21.49■■□□□ 1.03
CLN6-202ENST00000538696 CCDC152Q4G0S7 254 aa21.49■■□□□ 1.03
CLN6-202ENST00000538696 MTX1Q13505 466 aa21.48■■□□□ 1.03
CLN6-202ENST00000538696 CEP85Q6P2H3 762 aa21.48■■□□□ 1.03
CLN6-202ENST00000538696 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
CLN6-202ENST00000538696 CHMP3Q9Y3E7 222 aa21.48■■□□□ 1.03
CLN6-202ENST00000538696 A0A1B0GUL6 1792 aa21.48■■□□□ 1.03
CLN6-202ENST00000538696 SLX4Q8IY92 1834 aa21.47■■□□□ 1.03
CLN6-202ENST00000538696 DPEP1P16444 411 aa21.47■■□□□ 1.03
CLN6-202ENST00000538696 TGFB2P61812 414 aa21.47■■□□□ 1.03
CLN6-202ENST00000538696 RPGRQ92834 1020 aaKnown RBP21.47■■□□□ 1.03
CLN6-202ENST00000538696 SEC31BQ9NQW1 1179 aa21.47■■□□□ 1.03
CLN6-202ENST00000538696 PDZRN3Q9UPQ7 1066 aa21.47■■□□□ 1.03
CLN6-202ENST00000538696 LRRC37AA6NMS7 1700 aa21.47■■□□□ 1.03
CLN6-202ENST00000538696 PNMA6EA0A0J9YXQ4 647 aa21.46■■□□□ 1.03
CLN6-202ENST00000538696 H0YIN7 160 aa21.46■■□□□ 1.03
CLN6-202ENST00000538696 NPR1P16066 1061 aa21.46■■□□□ 1.03
CLN6-202ENST00000538696 HOXA10P31260 410 aaPredicted RBP21.46■■□□□ 1.03
CLN6-202ENST00000538696 NLGN2Q8NFZ4 835 aa21.46■■□□□ 1.03
CLN6-202ENST00000538696 MASTLQ96GX5 879 aa21.46■■□□□ 1.03
CLN6-202ENST00000538696 RWDD1Q9H446 243 aaPredicted RBP21.46■■□□□ 1.03
CLN6-202ENST00000538696 A0A0G2JLW4 131 aa21.45■■□□□ 1.02
CLN6-202ENST00000538696 ITGA6P23229 1130 aa21.45■■□□□ 1.02
CLN6-202ENST00000538696 ATP8B2P98198 1209 aa21.45■■□□□ 1.02
CLN6-202ENST00000538696 HDAC1Q13547 482 aaPredicted RBP21.45■■□□□ 1.02
CLN6-202ENST00000538696 STYK1Q6J9G0 422 aa21.45■■□□□ 1.02
CLN6-202ENST00000538696 RBM17Q96I25 401 aaKnown RBP21.45■■□□□ 1.02
CLN6-202ENST00000538696 KCNA3P22001 575 aa21.44■■□□□ 1.02
CLN6-202ENST00000538696 RFX5P48382 616 aaPredicted RBP21.44■■□□□ 1.02
CLN6-202ENST00000538696 DDX46Q7L014 1031 aaKnown RBP21.44■■□□□ 1.02
CLN6-202ENST00000538696 SKAP1Q86WV1 359 aa21.44■■□□□ 1.02
CLN6-202ENST00000538696 SIRT2Q8IXJ6 389 aa21.44■■□□□ 1.02
CLN6-202ENST00000538696 ARFGEF1Q9Y6D6 1849 aa21.43■■□□□ 1.02
CLN6-202ENST00000538696 ANKRD18BA2A2Z9 1011 aa21.43■■□□□ 1.02
CLN6-202ENST00000538696 SRGAP3O43295 1099 aa21.43■■□□□ 1.02
CLN6-202ENST00000538696 GRAPQ13588 217 aa21.43■■□□□ 1.02
CLN6-202ENST00000538696 POLA2Q14181 598 aa21.43■■□□□ 1.02
CLN6-202ENST00000538696 RPAP2Q8IXW5 612 aaPredicted RBP21.43■■□□□ 1.02
CLN6-202ENST00000538696 GRAPLQ8TC17 118 aaPredicted RBP21.43■■□□□ 1.02
CLN6-202ENST00000538696 CELF1Q92879 486 aaKnown RBP21.43■■□□□ 1.02
CLN6-202ENST00000538696 ZNF622Q969S3 477 aaKnown RBP eCLIP21.43■■□□□ 1.02
CLN6-202ENST00000538696 CRAMP1Q96RY5 1269 aa21.43■■□□□ 1.02
CLN6-202ENST00000538696 IFIT5Q13325 482 aaKnown RBP21.42■■□□□ 1.02
CLN6-202ENST00000538696 CCDC57Q2TAC2 916 aa21.42■■□□□ 1.02
CLN6-202ENST00000538696 SSH3Q8TE77 659 aa21.41■■□□□ 1.02
CLN6-202ENST00000538696 ZNF594Q96JF6 807 aaPredicted RBP21.41■■□□□ 1.02
CLN6-202ENST00000538696 SYT17Q9BSW7 474 aa21.41■■□□□ 1.02
CLN6-202ENST00000538696 KLHDC4Q8TBB5 520 aa21.4■■□□□ 1.02
CLN6-202ENST00000538696 CDC5LQ99459 802 aaKnown RBP21.4■■□□□ 1.02
CLN6-202ENST00000538696 PTPN12Q05209 780 aaKnown RBP21.39■■□□□ 1.01
CLN6-202ENST00000538696 SLC51AQ86UW1 340 aa21.39■■□□□ 1.01
CLN6-202ENST00000538696 ANKRD18AQ8IVF6 992 aa21.39■■□□□ 1.01
CLN6-202ENST00000538696 CNKSR1Q969H4 720 aa21.39■■□□□ 1.01
CLN6-202ENST00000538696 ALDH1B1P30837 517 aa21.38■■□□□ 1.01
CLN6-202ENST00000538696 PRPF40BQ6NWY9 871 aaKnown RBP21.38■■□□□ 1.01
CLN6-202ENST00000538696 PA2G4Q9UQ80 394 aaKnown RBP21.38■■□□□ 1.01
CLN6-202ENST00000538696 LTBP1Q14766 1721 aa21.38■■□□□ 1.01
CLN6-202ENST00000538696 PPEF1O14829 653 aaPredicted RBP21.37■■□□□ 1.01
CLN6-202ENST00000538696 IGHMBP2P38935 993 aaKnown RBP21.37■■□□□ 1.01
CLN6-202ENST00000538696 RPS8P62241 208 aaKnown RBP21.37■■□□□ 1.01
CLN6-202ENST00000538696 TAF7LQ5H9L4 462 aa21.37■■□□□ 1.01
CLN6-202ENST00000538696 TTLL6Q8N841 843 aa21.37■■□□□ 1.01
CLN6-202ENST00000538696 COPRSQ9NQ92 184 aa21.37■■□□□ 1.01
CLN6-202ENST00000538696 PIM2Q9P1W9 311 aa21.37■■□□□ 1.01
CLN6-202ENST00000538696 WWC3Q9ULE0 1092 aa21.37■■□□□ 1.01
CLN6-202ENST00000538696 HMMRO75330 724 aa21.36■■□□□ 1.01
CLN6-202ENST00000538696 SMC5Q8IY18 1101 aa21.36■■□□□ 1.01
CLN6-202ENST00000538696 BBOX1O75936 387 aa21.35■■□□□ 1.01
CLN6-202ENST00000538696 PUS3Q9BZE2 481 aaKnown RBP21.35■■□□□ 1.01
CLN6-202ENST00000538696 LRRC24Q50LG9 513 aa21.34■■□□□ 1.01
CLN6-202ENST00000538696 MPHOSPH8Q99549 860 aa21.34■■□□□ 1.01
CLN6-202ENST00000538696 SIL1Q9H173 461 aa21.34■■□□□ 1.01
CLN6-202ENST00000538696 BSDC1Q9NW68 430 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms