RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ZSCAN31Q96LW9 406 aaPredicted RBP29.82■■■□□ 2.36
RAB40C-204ENST00000538492 ZBTB3Q9H5J0 574 aa29.82■■■□□ 2.36
RAB40C-204ENST00000538492 COL15A1P39059 1388 aa29.82■■■□□ 2.36
RAB40C-204ENST00000538492 COL5A2P05997 1499 aaPredicted RBP29.82■■■□□ 2.36
RAB40C-204ENST00000538492 ST3GAL1Q11201 340 aa29.81■■■□□ 2.36
RAB40C-204ENST00000538492 ERVV-2B6SEH9 535 aa29.81■■■□□ 2.36
RAB40C-204ENST00000538492 FOXO4P98177 505 aa29.81■■■□□ 2.36
RAB40C-204ENST00000538492 SH2B1Q9NRF2 756 aaPredicted RBP29.81■■■□□ 2.36
RAB40C-204ENST00000538492 TPCN1Q9ULQ1 816 aa29.81■■■□□ 2.36
RAB40C-204ENST00000538492 IL2RBP14784 551 aa29.8■■■□□ 2.36
RAB40C-204ENST00000538492 RNF20Q5VTR2 975 aa29.8■■■□□ 2.36
RAB40C-204ENST00000538492 SLAIN2Q9P270 581 aa29.8■■■□□ 2.36
RAB40C-204ENST00000538492 H7C1W4 665 aa29.79■■■□□ 2.36
RAB40C-204ENST00000538492 PSMA5P28066 241 aa29.79■■■□□ 2.36
RAB40C-204ENST00000538492 CWC25Q9NXE8 425 aaPredicted RBP29.79■■■□□ 2.36
RAB40C-204ENST00000538492 F13A1P00488 732 aa29.79■■■□□ 2.36
RAB40C-204ENST00000538492 SOS2Q07890 1332 aaPredicted RBP29.78■■■□□ 2.36
RAB40C-204ENST00000538492 TAF5LO75529 589 aa29.78■■■□□ 2.36
RAB40C-204ENST00000538492 BLOC1S2Q6QNY1 142 aa29.77■■■□□ 2.36
RAB40C-204ENST00000538492 DDX46Q7L014 1031 aaKnown RBP29.77■■■□□ 2.36
RAB40C-204ENST00000538492 UBR2Q8IWV8 1755 aa29.77■■■□□ 2.36
RAB40C-204ENST00000538492 SEC62Q99442 399 aaKnown RBP29.76■■■□□ 2.36
RAB40C-204ENST00000538492 KCPQ6ZWJ8 1503 aa29.76■■■□□ 2.35
RAB40C-204ENST00000538492 CCDC129Q6ZRS4 1044 aa29.76■■■□□ 2.35
RAB40C-204ENST00000538492 NEUROD6Q96NK8 337 aa29.76■■■□□ 2.35
RAB40C-204ENST00000538492 SYAP1Q96A49 352 aaPredicted RBP29.75■■■□□ 2.35
RAB40C-204ENST00000538492 RNF214Q8ND24 703 aa29.75■■■□□ 2.35
RAB40C-204ENST00000538492 NKX1-1Q15270 411 aaPredicted RBP29.74■■■□□ 2.35
RAB40C-204ENST00000538492 HAUS7Q99871 368 aa29.74■■■□□ 2.35
RAB40C-204ENST00000538492 CARD10Q9BWT7 1032 aa29.74■■■□□ 2.35
RAB40C-204ENST00000538492 MTMR6Q9Y217 621 aa29.74■■■□□ 2.35
RAB40C-204ENST00000538492 NUP188Q5SRE5 1749 aa29.74■■■□□ 2.35
RAB40C-204ENST00000538492 FIBPO43427 364 aa29.74■■■□□ 2.35
RAB40C-204ENST00000538492 ATG9AQ7Z3C6 839 aa29.74■■■□□ 2.35
RAB40C-204ENST00000538492 ZNF330Q9Y3S2 320 aaPredicted RBP29.74■■■□□ 2.35
RAB40C-204ENST00000538492 JCADQ9P266 1359 aa29.73■■■□□ 2.35
RAB40C-204ENST00000538492 VPS37CA5D8V6 355 aaPredicted RBP29.73■■■□□ 2.35
RAB40C-204ENST00000538492 RPS6KB1P23443 525 aa29.73■■■□□ 2.35
RAB40C-204ENST00000538492 EVA1CP58658 441 aa29.73■■■□□ 2.35
RAB40C-204ENST00000538492 TMEM87AQ8NBN3 555 aa29.73■■■□□ 2.35
RAB40C-204ENST00000538492 ZNF609O15014 1411 aa29.73■■■□□ 2.35
RAB40C-204ENST00000538492 ZNF335Q9H4Z2 1342 aaPredicted RBP29.73■■■□□ 2.35
RAB40C-204ENST00000538492 TIMM10P62072 90 aa29.72■■■□□ 2.35
RAB40C-204ENST00000538492 ZNF594Q96JF6 807 aaPredicted RBP29.72■■■□□ 2.35
RAB40C-204ENST00000538492 ATP6V1DQ9Y5K8 247 aa29.72■■■□□ 2.35
RAB40C-204ENST00000538492 HMG20BQ9P0W2 317 aa29.72■■■□□ 2.35
RAB40C-204ENST00000538492 TJP1Q07157 1748 aa29.71■■■□□ 2.35
RAB40C-204ENST00000538492 DNM1Q05193 864 aaKnown RBP29.7■■■□□ 2.35
RAB40C-204ENST00000538492 SHANK3Q9BYB0 1731 aa29.7■■■□□ 2.34
RAB40C-204ENST00000538492 TOB2Q14106 344 aaPredicted RBP29.7■■■□□ 2.34
RAB40C-204ENST00000538492 LRRC24Q50LG9 513 aa29.7■■■□□ 2.34
RAB40C-204ENST00000538492 CCDC191Q8NCU4 936 aa29.7■■■□□ 2.34
RAB40C-204ENST00000538492 USPL1Q5W0Q7 1092 aa29.69■■■□□ 2.34
RAB40C-204ENST00000538492 TSPY26PQ9H489 355 aa29.69■■■□□ 2.34
RAB40C-204ENST00000538492 STK3Q13188 491 aa29.69■■■□□ 2.34
RAB40C-204ENST00000538492 SLFNL1Q499Z3 407 aa29.69■■■□□ 2.34
RAB40C-204ENST00000538492 ANKRD1Q15327 319 aa29.68■■■□□ 2.34
RAB40C-204ENST00000538492 MCMDC2Q4G0Z9 681 aa29.68■■■□□ 2.34
RAB40C-204ENST00000538492 PAPPAQ13219 1627 aa29.68■■■□□ 2.34
RAB40C-204ENST00000538492 GOLIM4O00461 696 aa29.68■■■□□ 2.34
RAB40C-204ENST00000538492 LARP1BQ659C4 914 aaKnown RBP29.68■■■□□ 2.34
RAB40C-204ENST00000538492 TSGA10IPQ3SY00 556 aa29.67■■■□□ 2.34
RAB40C-204ENST00000538492 KBTBD3Q8NAB2 608 aa29.67■■■□□ 2.34
RAB40C-204ENST00000538492 PHF14O94880 888 aa29.66■■■□□ 2.34
RAB40C-204ENST00000538492 IL15P40933 162 aaPredicted RBP29.66■■■□□ 2.34
RAB40C-204ENST00000538492 UBE2HP62256 183 aa29.66■■■□□ 2.34
RAB40C-204ENST00000538492 TMOD3Q9NYL9 352 aa29.66■■■□□ 2.34
RAB40C-204ENST00000538492 ABCA3Q99758 1704 aa29.66■■■□□ 2.34
RAB40C-204ENST00000538492 PDLIM2Q96JY6 352 aa29.66■■■□□ 2.34
RAB40C-204ENST00000538492 RFX7Q2KHR2 1363 aa29.65■■■□□ 2.34
RAB40C-204ENST00000538492 PUS3Q9BZE2 481 aaKnown RBP29.65■■■□□ 2.34
RAB40C-204ENST00000538492 PAG1Q9NWQ8 432 aa29.65■■■□□ 2.34
RAB40C-204ENST00000538492 TNS2Q63HR2 1409 aa29.65■■■□□ 2.34
RAB40C-204ENST00000538492 EYA2O00167 538 aa29.64■■■□□ 2.34
RAB40C-204ENST00000538492 FERMT3Q86UX7 667 aa29.64■■■□□ 2.34
RAB40C-204ENST00000538492 NEK1Q96PY6 1258 aa29.64■■■□□ 2.34
RAB40C-204ENST00000538492 STRCQ7RTU9 1775 aa29.64■■■□□ 2.34
RAB40C-204ENST00000538492 CYP21A2P08686 494 aa29.64■■■□□ 2.34
RAB40C-204ENST00000538492 KRT32Q14532 448 aa29.63■■■□□ 2.33
RAB40C-204ENST00000538492 CDC37L1Q7L3B6 337 aa29.63■■■□□ 2.33
RAB40C-204ENST00000538492 ALDH8A1Q9H2A2 487 aaPredicted RBP29.63■■■□□ 2.33
RAB40C-204ENST00000538492 U3KPZ7 1027 aaPredicted RBP29.63■■■□□ 2.33
RAB40C-204ENST00000538492 ZSCAN30Q86W11 494 aa29.63■■■□□ 2.33
RAB40C-204ENST00000538492 TOGARAM1Q9Y4F4 1720 aa29.63■■■□□ 2.33
RAB40C-204ENST00000538492 CCDC183Q5T5S1 534 aa29.62■■■□□ 2.33
RAB40C-204ENST00000538492 ASAP1Q9ULH1 1129 aa29.62■■■□□ 2.33
RAB40C-204ENST00000538492 CCDC85AQ96PX6 553 aaPredicted RBP29.62■■■□□ 2.33
RAB40C-204ENST00000538492 A0A1B0GUL7 405 aa29.61■■■□□ 2.33
RAB40C-204ENST00000538492 GPR108Q9NPR9 543 aa29.61■■■□□ 2.33
RAB40C-204ENST00000538492 FAM173BQ6P4H8 233 aa29.6■■■□□ 2.33
RAB40C-204ENST00000538492 DNAJC10Q8IXB1 793 aa29.6■■■□□ 2.33
RAB40C-204ENST00000538492 ISCA1Q9BUE6 129 aa29.6■■■□□ 2.33
RAB40C-204ENST00000538492 SH3TC1Q8TE82 1336 aa29.6■■■□□ 2.33
RAB40C-204ENST00000538492 TCIRG1Q13488 830 aa29.59■■■□□ 2.33
RAB40C-204ENST00000538492 Q6ZUG5 572 aa29.59■■■□□ 2.33
RAB40C-204ENST00000538492 LRRC2Q9BYS8 371 aa29.59■■■□□ 2.33
RAB40C-204ENST00000538492 NAP1L5Q96NT1 182 aaPredicted RBP29.59■■■□□ 2.33
RAB40C-204ENST00000538492 PALLDQ8WX93 1383 aa29.59■■■□□ 2.33
RAB40C-204ENST00000538492 IFIT1P09914 478 aaKnown RBP29.59■■■□□ 2.33
RAB40C-204ENST00000538492 PIGBQ92521 554 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms