RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 NLGN1Q8N2Q7 840 aa12.53□□□□□ -0.4
LDHA-216ENST00000538451 SGIP1Q9BQI5 828 aa12.53□□□□□ -0.4
LDHA-216ENST00000538451 CDHR2Q9BYE9 1310 aa12.53□□□□□ -0.4
LDHA-216ENST00000538451 ERC1Q8IUD2 1116 aa12.52□□□□□ -0.41
LDHA-216ENST00000538451 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.41
LDHA-216ENST00000538451 NUP98P52948 1817 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 PDE8AO60658 829 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 RAB11FIP3O75154 756 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 IGHDP01880 384 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 OS9Q13438 667 aaPredicted RBP12.51□□□□□ -0.41
LDHA-216ENST00000538451 CCDC57Q2TAC2 916 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 NBPF5PQ86XG9 351 aaPredicted RBP12.51□□□□□ -0.41
LDHA-216ENST00000538451 SMC5Q8IY18 1101 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 SUCLG2Q96I99 432 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 PLA2G12BQ9BX93 195 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 BICC1Q9H694 974 aaKnown RBP12.51□□□□□ -0.41
LDHA-216ENST00000538451 DCTPP1Q9H773 170 aa12.51□□□□□ -0.41
LDHA-216ENST00000538451 TUBGCP6Q96RT7 1819 aa12.5□□□□□ -0.41
LDHA-216ENST00000538451 ANKRD36CQ5JPF3 1778 aa12.5□□□□□ -0.41
LDHA-216ENST00000538451 CARMIL3Q8ND23 1372 aa12.5□□□□□ -0.41
LDHA-216ENST00000538451 IRS4O14654 1257 aaPredicted RBP12.5□□□□□ -0.41
LDHA-216ENST00000538451 TAF7LQ5H9L4 462 aa12.5□□□□□ -0.41
LDHA-216ENST00000538451 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
LDHA-216ENST00000538451 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
LDHA-216ENST00000538451 CHMP3Q9Y3E7 222 aa12.5□□□□□ -0.41
LDHA-216ENST00000538451 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
LDHA-216ENST00000538451 SURF6O75683 361 aaKnown RBP12.49□□□□□ -0.41
LDHA-216ENST00000538451 G3BP1Q13283 466 aaKnown RBP eCLIP12.49□□□□□ -0.413e-16■■■■■ 28.3
LDHA-216ENST00000538451 RABL6Q3YEC7 729 aaPredicted RBP12.49□□□□□ -0.41
LDHA-216ENST00000538451 RTL5Q5HYW3 569 aaPredicted RBP12.49□□□□□ -0.41
LDHA-216ENST00000538451 SUSD4Q5VX71 490 aa12.49□□□□□ -0.41
LDHA-216ENST00000538451 FHDC1Q9C0D6 1143 aaPredicted RBP12.49□□□□□ -0.41
LDHA-216ENST00000538451 SRP68Q9UHB9 627 aaKnown RBP12.49□□□□□ -0.41
LDHA-216ENST00000538451 SCN7AQ01118 1682 aa12.49□□□□□ -0.41
LDHA-216ENST00000538451 UBN2Q6ZU65 1347 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 FAM177BA6PVY3 158 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 CASP7P55210 303 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 ST5P78524 1137 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 IFIT5Q13325 482 aaKnown RBP12.48□□□□□ -0.41
LDHA-216ENST00000538451 CCDC152Q4G0S7 254 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 ANKRD45Q5TZF3 282 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 LMBR1LQ6UX01 489 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 SIRT2Q8IXJ6 389 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 SYT17Q9BSW7 474 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 UBR3Q6ZT12 1888 aa12.48□□□□□ -0.41
LDHA-216ENST00000538451 PNMA6EA0A0J9YXQ4 647 aa12.47□□□□□ -0.41
LDHA-216ENST00000538451 GYS1P13807 737 aa12.47□□□□□ -0.41
LDHA-216ENST00000538451 CNBD1Q8NA66 436 aa12.47□□□□□ -0.41
LDHA-216ENST00000538451 KIF1BPQ96EK5 621 aa12.47□□□□□ -0.41
LDHA-216ENST00000538451 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
LDHA-216ENST00000538451 LRRCC1Q9C099 1032 aa12.47□□□□□ -0.41
LDHA-216ENST00000538451 ANKRD18BA2A2Z9 1011 aa12.46□□□□□ -0.41
LDHA-216ENST00000538451 NTSR2O95665 410 aa12.46□□□□□ -0.41
LDHA-216ENST00000538451 CTSWP56202 376 aa12.46□□□□□ -0.41
LDHA-216ENST00000538451 FOXO4P98177 505 aa12.46□□□□□ -0.41
LDHA-216ENST00000538451 NUCB1Q02818 461 aa12.46□□□□□ -0.41
LDHA-216ENST00000538451 MSL1Q68DK7 614 aa12.46□□□□□ -0.41
LDHA-216ENST00000538451 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
LDHA-216ENST00000538451 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
LDHA-216ENST00000538451 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
LDHA-216ENST00000538451 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
LDHA-216ENST00000538451 CSF1RP07333 972 aa12.45□□□□□ -0.42
LDHA-216ENST00000538451 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.422e-27■■□□□ 12
LDHA-216ENST00000538451 NFIXQ14938 502 aa12.45□□□□□ -0.42
LDHA-216ENST00000538451 SLC10A5Q5PT55 438 aa12.45□□□□□ -0.42
LDHA-216ENST00000538451 AMIGO3Q86WK7 504 aa12.45□□□□□ -0.42
LDHA-216ENST00000538451 CLASRPQ8N2M8 674 aaKnown RBP12.45□□□□□ -0.42
LDHA-216ENST00000538451 JARID2Q92833 1246 aaPredicted RBP12.45□□□□□ -0.42
LDHA-216ENST00000538451 KAZALD1Q96I82 304 aa12.45□□□□□ -0.42
LDHA-216ENST00000538451 COPRSQ9NQ92 184 aa12.45□□□□□ -0.42
LDHA-216ENST00000538451 NOP58Q9Y2X3 529 aaKnown RBP12.45□□□□□ -0.42
LDHA-216ENST00000538451 SERPINB2P05120 415 aa12.44□□□□□ -0.42
LDHA-216ENST00000538451 TTLL11Q8NHH1 800 aa12.44□□□□□ -0.42
LDHA-216ENST00000538451 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
LDHA-216ENST00000538451 CDC5LQ99459 802 aaKnown RBP12.44□□□□□ -0.42
LDHA-216ENST00000538451 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
LDHA-216ENST00000538451 EXOC6BQ9Y2D4 811 aa12.44□□□□□ -0.42
LDHA-216ENST00000538451 C4AP0C0L4 1744 aa12.44□□□□□ -0.42
LDHA-216ENST00000538451 APBB1O00213 710 aa12.43□□□□□ -0.42
LDHA-216ENST00000538451 HCLS1P14317 486 aaPredicted RBP12.43□□□□□ -0.42
LDHA-216ENST00000538451 TM4SF1P30408 202 aa12.43□□□□□ -0.42
LDHA-216ENST00000538451 IGHMBP2P38935 993 aaKnown RBP12.43□□□□□ -0.42
LDHA-216ENST00000538451 IL15P40933 162 aaPredicted RBP12.43□□□□□ -0.42
LDHA-216ENST00000538451 ERFEQ4G0M1 354 aa12.43□□□□□ -0.42
LDHA-216ENST00000538451 SMIM5Q71RC9 77 aa12.43□□□□□ -0.42
LDHA-216ENST00000538451 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
LDHA-216ENST00000538451 MPHOSPH8Q99549 860 aa12.43□□□□□ -0.42
LDHA-216ENST00000538451 CIAO1O76071 339 aa12.42□□□□□ -0.42
LDHA-216ENST00000538451 ITGA6P23229 1130 aa12.42□□□□□ -0.42
LDHA-216ENST00000538451 SF3B3Q15393 1217 aaKnown RBP12.42□□□□□ -0.42
LDHA-216ENST00000538451 EPHA10Q5JZY3 1008 aa12.42□□□□□ -0.42
LDHA-216ENST00000538451 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
LDHA-216ENST00000538451 LNPKQ9C0E8 428 aa12.42□□□□□ -0.42
LDHA-216ENST00000538451 RTL9Q8NET4 1388 aa12.42□□□□□ -0.42
LDHA-216ENST00000538451 RGS3P49796 1198 aa12.41□□□□□ -0.42
LDHA-216ENST00000538451 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
LDHA-216ENST00000538451 NBR1Q14596 966 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms