RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 COPS6Q7L5N1 327 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 CHPF2Q9P2E5 772 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 IFIT1BQ5T764 474 aaKnown RBP19.29■□□□□ 0.68
SCARB1-205ENST00000538291 EXOC1Q9NV70 894 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 PTPN23Q9H3S7 1636 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 KLF18A0A0U1RQI7 1052 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 SHTN1A0MZ66 631 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 ZNF804AQ7Z570 1209 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 RMND1Q9NWS8 449 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 ZBTB43O43298 467 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 CCDC172P0C7W6 258 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 NAA16Q6N069 864 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-205ENST00000538291 NIP7Q9Y221 180 aaKnown RBP eCLIP19.29■□□□□ 0.68
SCARB1-205ENST00000538291 SMC1AQ14683 1233 aaKnown RBP19.29■□□□□ 0.68
SCARB1-205ENST00000538291 TTC22Q5TAA0 569 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 NYXQ9GZU5 481 aa19.29■□□□□ 0.68
SCARB1-205ENST00000538291 F8W031 263 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-205ENST00000538291 ALDH1L1O75891 902 aa19.28■□□□□ 0.68
SCARB1-205ENST00000538291 IL27Q8NEV9 243 aa19.28■□□□□ 0.68
SCARB1-205ENST00000538291 CLEC11AQ9Y240 323 aa19.28■□□□□ 0.68
SCARB1-205ENST00000538291 NOP2P46087 812 aaKnown RBP19.28■□□□□ 0.68
SCARB1-205ENST00000538291 RBM25P49756 843 aaKnown RBP19.28■□□□□ 0.68
SCARB1-205ENST00000538291 ZSCAN16Q9H4T2 348 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-205ENST00000538291 GOLGA6L10A0A0M3HER8 536 aa19.28■□□□□ 0.68
SCARB1-205ENST00000538291 SPECC1Q5M775 1068 aa19.28■□□□□ 0.68
SCARB1-205ENST00000538291 NF2P35240 595 aa19.27■□□□□ 0.68
SCARB1-205ENST00000538291 ACTN2P35609 894 aa19.27■□□□□ 0.68
SCARB1-205ENST00000538291 IL15P40933 162 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-205ENST00000538291 UTP14AQ9BVJ6 771 aaKnown RBP19.27■□□□□ 0.68
SCARB1-205ENST00000538291 TRIM47Q96LD4 638 aa19.27■□□□□ 0.68
SCARB1-205ENST00000538291 C8orf37Q96NL8 207 aa19.27■□□□□ 0.68
SCARB1-205ENST00000538291 MAP3K1Q13233 1512 aa19.27■□□□□ 0.68
SCARB1-205ENST00000538291 PRPF4BQ13523 1007 aaKnown RBP19.27■□□□□ 0.68
SCARB1-205ENST00000538291 BRF1Q92994 677 aa19.27■□□□□ 0.68
SCARB1-205ENST00000538291 AKAP4Q5JQC9 854 aa19.27■□□□□ 0.67
SCARB1-205ENST00000538291 TMC6Q7Z403 805 aa19.27■□□□□ 0.67
SCARB1-205ENST00000538291 ARHGAP45Q92619 1136 aa19.27■□□□□ 0.67
SCARB1-205ENST00000538291 IQSEC3Q9UPP2 1182 aaPredicted RBP19.27■□□□□ 0.67
SCARB1-205ENST00000538291 B4DLN1 442 aa19.26■□□□□ 0.67
SCARB1-205ENST00000538291 MRPL12P52815 198 aaKnown RBP19.26■□□□□ 0.67
SCARB1-205ENST00000538291 HLTFQ14527 1009 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCARB1-205ENST00000538291 LMBR1LQ6UX01 489 aa19.26■□□□□ 0.67
SCARB1-205ENST00000538291 DHX37Q8IY37 1157 aaKnown RBP19.26■□□□□ 0.67
SCARB1-205ENST00000538291 PABPN1LA6NDY0 278 aaKnown RBP19.26■□□□□ 0.67
SCARB1-205ENST00000538291 TSHZ3Q63HK5 1081 aa19.26■□□□□ 0.67
SCARB1-205ENST00000538291 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
SCARB1-205ENST00000538291 PICALMQ13492 652 aa19.26■□□□□ 0.67
SCARB1-205ENST00000538291 RTN1Q16799 776 aa19.26■□□□□ 0.67
SCARB1-205ENST00000538291 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
SCARB1-205ENST00000538291 TPTE2Q6XPS3 522 aa19.25■□□□□ 0.67
SCARB1-205ENST00000538291 VTI1AQ96AJ9 217 aa19.25■□□□□ 0.67
SCARB1-205ENST00000538291 GRM8O00222 908 aa19.25■□□□□ 0.67
SCARB1-205ENST00000538291 CAVIN2O95810 425 aa19.25■□□□□ 0.67
SCARB1-205ENST00000538291 GOLGA6L9A6NEM1 432 aa19.25■□□□□ 0.67
SCARB1-205ENST00000538291 POLD1P28340 1107 aa19.25■□□□□ 0.67
SCARB1-205ENST00000538291 SLC39A6Q13433 755 aa19.25■□□□□ 0.67
SCARB1-205ENST00000538291 TNPO1Q92973 898 aaKnown RBP19.25■□□□□ 0.67
SCARB1-205ENST00000538291 USP25Q9UHP3 1055 aa19.25■□□□□ 0.67
SCARB1-205ENST00000538291 KSR2Q6VAB6 950 aa19.25■□□□□ 0.67
SCARB1-205ENST00000538291 ZC3H12CQ9C0D7 883 aaKnown RBP19.25■□□□□ 0.67
SCARB1-205ENST00000538291 IFI16Q16666 785 aaKnown RBP19.24■□□□□ 0.67
SCARB1-205ENST00000538291 HEATR3Q7Z4Q2 680 aa19.24■□□□□ 0.67
SCARB1-205ENST00000538291 SMARCC2Q8TAQ2 1214 aa19.24■□□□□ 0.67
SCARB1-205ENST00000538291 GDPD2Q9HCC8 539 aa19.24■□□□□ 0.67
SCARB1-205ENST00000538291 TBC1D5Q92609 795 aa19.24■□□□□ 0.67
SCARB1-205ENST00000538291 TBC1D2Q9BYX2 928 aa19.24■□□□□ 0.67
SCARB1-205ENST00000538291 N4BP3O15049 544 aa19.24■□□□□ 0.67
SCARB1-205ENST00000538291 PPFIA3O75145 1194 aa19.24■□□□□ 0.67
SCARB1-205ENST00000538291 ALG1Q9BT22 464 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 SYNCQ9H7C4 482 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 BCCIPQ9P287 314 aaKnown RBP eCLIP19.23■□□□□ 0.67
SCARB1-205ENST00000538291 KRT13P13646 458 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 IL2RBP14784 551 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 ZNF165P49910 485 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 SLC9C2Q5TAH2 1124 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 FSD2A1L4K1 749 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 POTEB2H3BUK9 544 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 SYKP43405 635 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 GRM1Q13255 1194 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 UBE4AQ14139 1066 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 MCMDC2Q4G0Z9 681 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 DZIP3Q86Y13 1208 aaKnown RBP19.23■□□□□ 0.67
SCARB1-205ENST00000538291 JDP2Q8WYK2 163 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 SPAG5Q96R06 1193 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 MMRN2Q9H8L6 949 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 TRMT1Q9NXH9 659 aaKnown RBP19.23■□□□□ 0.67
SCARB1-205ENST00000538291 PARP3Q9Y6F1 533 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 PHACTR2O75167 634 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 PLCG2P16885 1265 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 STAT6P42226 847 aa19.23■□□□□ 0.67
SCARB1-205ENST00000538291 RTCBQ9Y3I0 505 aaKnown RBP19.23■□□□□ 0.67
SCARB1-205ENST00000538291 AKR1B10O60218 316 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 CA8P35219 290 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 PLVAPQ9BX97 442 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 HOMER2Q9NSB8 354 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 UBE2HP62256 183 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 SIRT1Q96EB6 747 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 VEZTQ9HBM0 779 aa19.22■□□□□ 0.67
SCARB1-205ENST00000538291 NAPAP54920 295 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms