RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 CRY2Q49AN0 593 aa30.3■■■□□ 2.44
HMGA2-207ENST00000537275 ERICH6BQ5W0A0 696 aa30.3■■■□□ 2.44
HMGA2-207ENST00000537275 PPP1R1BQ9UD71 204 aaPredicted RBP30.3■■■□□ 2.44
HMGA2-207ENST00000537275 KIF13BQ9NQT8 1826 aa30.29■■■□□ 2.44
HMGA2-207ENST00000537275 PDE6BP35913 854 aa30.29■■■□□ 2.44
HMGA2-207ENST00000537275 ATP8B2P98198 1209 aa30.29■■■□□ 2.44
HMGA2-207ENST00000537275 KLHL34Q8N239 644 aa30.29■■■□□ 2.44
HMGA2-207ENST00000537275 CCDC152Q4G0S7 254 aa30.28■■■□□ 2.44
HMGA2-207ENST00000537275 SIRT2Q8IXJ6 389 aa30.28■■■□□ 2.44
HMGA2-207ENST00000537275 PNMA6EA0A0J9YXQ4 647 aa30.27■■■□□ 2.44
HMGA2-207ENST00000537275 CCDC85AQ96PX6 553 aaPredicted RBP30.27■■■□□ 2.44
HMGA2-207ENST00000537275 GREM2Q9H772 168 aa30.27■■■□□ 2.44
HMGA2-207ENST00000537275 RTL9Q8NET4 1388 aa30.27■■■□□ 2.44
HMGA2-207ENST00000537275 SRGAP3O43295 1099 aa30.26■■■□□ 2.43
HMGA2-207ENST00000537275 FAM161AQ3B820 660 aa30.26■■■□□ 2.43
HMGA2-207ENST00000537275 CHMP3Q9Y3E7 222 aa30.26■■■□□ 2.43
HMGA2-207ENST00000537275 SSH3Q8TE77 659 aa30.24■■■□□ 2.43
HMGA2-207ENST00000537275 PDZRN3Q9UPQ7 1066 aa30.24■■■□□ 2.43
HMGA2-207ENST00000537275 SRGNP10124 158 aa30.23■■■□□ 2.43
HMGA2-207ENST00000537275 ITGA6P23229 1130 aa30.23■■■□□ 2.43
HMGA2-207ENST00000537275 POLA2Q14181 598 aa30.23■■■□□ 2.43
HMGA2-207ENST00000537275 RFX5P48382 616 aaPredicted RBP30.22■■■□□ 2.43
HMGA2-207ENST00000537275 IFIT5Q13325 482 aaKnown RBP30.22■■■□□ 2.43
HMGA2-207ENST00000537275 CCDC57Q2TAC2 916 aa30.22■■■□□ 2.43
HMGA2-207ENST00000537275 CD2APQ9Y5K6 639 aa30.22■■■□□ 2.43
HMGA2-207ENST00000537275 COL11A2P13942 1736 aaPredicted RBP30.22■■■□□ 2.43
HMGA2-207ENST00000537275 HOXA10P31260 410 aaPredicted RBP30.22■■■□□ 2.43
HMGA2-207ENST00000537275 RPGRQ92834 1020 aaKnown RBP30.22■■■□□ 2.43
HMGA2-207ENST00000537275 SEC31BQ9NQW1 1179 aa30.22■■■□□ 2.43
HMGA2-207ENST00000537275 H0YIN7 160 aa30.21■■■□□ 2.43
HMGA2-207ENST00000537275 C2CD5Q86YS7 1000 aa30.21■■■□□ 2.43
HMGA2-207ENST00000537275 ANKRD18BA2A2Z9 1011 aa30.2■■■□□ 2.42
HMGA2-207ENST00000537275 HMMRO75330 724 aa30.2■■■□□ 2.42
HMGA2-207ENST00000537275 TGFB2P61812 414 aa30.2■■■□□ 2.42
HMGA2-207ENST00000537275 DDX46Q7L014 1031 aaKnown RBP30.2■■■□□ 2.42
HMGA2-207ENST00000537275 NPR1P16066 1061 aa30.19■■■□□ 2.42
HMGA2-207ENST00000537275 CHRNA5P30532 468 aa30.18■■■□□ 2.42
HMGA2-207ENST00000537275 PTPN12Q05209 780 aaKnown RBP30.18■■■□□ 2.42
HMGA2-207ENST00000537275 MASTLQ96GX5 879 aa30.18■■■□□ 2.42
HMGA2-207ENST00000537275 RBM17Q96I25 401 aaKnown RBP30.18■■■□□ 2.42
HMGA2-207ENST00000537275 KIAA1551Q9HCM1 1747 aa30.18■■■□□ 2.42
HMGA2-207ENST00000537275 HDAC1Q13547 482 aaPredicted RBP30.17■■■□□ 2.42
HMGA2-207ENST00000537275 CRAMP1Q96RY5 1269 aa30.17■■■□□ 2.42
HMGA2-207ENST00000537275 TAF1P21675 1872 aa30.17■■■□□ 2.42
HMGA2-207ENST00000537275 COL4A1P02462 1669 aa30.17■■■□□ 2.42
HMGA2-207ENST00000537275 KLHDC4Q8TBB5 520 aa30.17■■■□□ 2.42
HMGA2-207ENST00000537275 CDC5LQ99459 802 aaKnown RBP30.17■■■□□ 2.42
HMGA2-207ENST00000537275 COPRSQ9NQ92 184 aa30.17■■■□□ 2.42
HMGA2-207ENST00000537275 STYK1Q6J9G0 422 aa30.16■■■□□ 2.42
HMGA2-207ENST00000537275 CELF1Q92879 486 aaKnown RBP30.16■■■□□ 2.42
HMGA2-207ENST00000537275 ZNF594Q96JF6 807 aaPredicted RBP30.16■■■□□ 2.42
HMGA2-207ENST00000537275 KCNA3P22001 575 aa30.15■■■□□ 2.42
HMGA2-207ENST00000537275 GRAPQ13588 217 aa30.15■■■□□ 2.42
HMGA2-207ENST00000537275 GRAPLQ8TC17 118 aaPredicted RBP30.15■■■□□ 2.42
HMGA2-207ENST00000537275 ZNF622Q969S3 477 aaKnown RBP eCLIP30.15■■■□□ 2.42
HMGA2-207ENST00000537275 PA2G4Q9UQ80 394 aaKnown RBP30.15■■■□□ 2.42
HMGA2-207ENST00000537275 DLEC1Q9Y238 1755 aa30.15■■■□□ 2.42
HMGA2-207ENST00000537275 SRCAPQ6ZRS2 3230 aa30.15■■■□□ 2.42
HMGA2-207ENST00000537275 A0A0G2JLW4 131 aa30.14■■■□□ 2.42
HMGA2-207ENST00000537275 DPEP1P16444 411 aa30.14■■■□□ 2.42
HMGA2-207ENST00000537275 FHDC1Q9C0D6 1143 aaPredicted RBP30.14■■■□□ 2.42
HMGA2-207ENST00000537275 IGHDP01880 384 aa30.13■■■□□ 2.41
HMGA2-207ENST00000537275 ALDH1B1P30837 517 aa30.13■■■□□ 2.41
HMGA2-207ENST00000537275 RPS8P62241 208 aaKnown RBP30.13■■■□□ 2.41
HMGA2-207ENST00000537275 TAF7LQ5H9L4 462 aa30.13■■■□□ 2.41
HMGA2-207ENST00000537275 ANKRD18AQ8IVF6 992 aa30.13■■■□□ 2.41
HMGA2-207ENST00000537275 RWDD1Q9H446 243 aaPredicted RBP30.13■■■□□ 2.41
HMGA2-207ENST00000537275 PPP4R2Q9NY27 417 aa30.13■■■□□ 2.41
HMGA2-207ENST00000537275 NOP58Q9Y2X3 529 aaKnown RBP30.12■■■□□ 2.41
HMGA2-207ENST00000537275 LRP5O75197 1615 aa30.12■■■□□ 2.41
HMGA2-207ENST00000537275 IGHMBP2P38935 993 aaKnown RBP30.11■■■□□ 2.41
HMGA2-207ENST00000537275 SURF6O75683 361 aaKnown RBP30.1■■■□□ 2.41
HMGA2-207ENST00000537275 BBOX1O75936 387 aa30.1■■■□□ 2.41
HMGA2-207ENST00000537275 LDHAL6AQ6ZMR3 332 aa30.1■■■□□ 2.41
HMGA2-207ENST00000537275 CNKSR1Q969H4 720 aa30.1■■■□□ 2.41
HMGA2-207ENST00000537275 DCTPP1Q9H773 170 aa30.1■■■□□ 2.41
HMGA2-207ENST00000537275 FBXO3Q9UK99 471 aa30.1■■■□□ 2.41
HMGA2-207ENST00000537275 MPHOSPH8Q99549 860 aa30.09■■■□□ 2.41
HMGA2-207ENST00000537275 PUS3Q9BZE2 481 aaKnown RBP30.09■■■□□ 2.41
HMGA2-207ENST00000537275 SIL1Q9H173 461 aa30.09■■■□□ 2.41
HMGA2-207ENST00000537275 BSDC1Q9NW68 430 aaPredicted RBP30.09■■■□□ 2.41
HMGA2-207ENST00000537275 GTF3C3Q9Y5Q9 886 aa30.09■■■□□ 2.41
HMGA2-207ENST00000537275 EYA2O00167 538 aa30.08■■■□□ 2.41
HMGA2-207ENST00000537275 NLGN2Q8NFZ4 835 aa30.08■■■□□ 2.41
HMGA2-207ENST00000537275 CCDC136Q96JN2 1154 aa30.08■■■□□ 2.41
HMGA2-207ENST00000537275 SPEF2Q9C093 1822 aa30.08■■■□□ 2.41
HMGA2-207ENST00000537275 CIAO1O76071 339 aa30.07■■■□□ 2.4
HMGA2-207ENST00000537275 LRRC24Q50LG9 513 aa30.07■■■□□ 2.4
HMGA2-207ENST00000537275 EXOC6BQ9Y2D4 811 aa30.07■■■□□ 2.4
HMGA2-207ENST00000537275 ATG9AQ7Z3C6 839 aa30.06■■■□□ 2.4
HMGA2-207ENST00000537275 CNNM1Q9NRU3 951 aa30.06■■■□□ 2.4
HMGA2-207ENST00000537275 RIPOR2Q9Y4F9 1068 aa30.06■■■□□ 2.4
HMGA2-207ENST00000537275 BRCA1P38398 1863 aaKnown RBP30.06■■■□□ 2.4
HMGA2-207ENST00000537275 SYT17Q9BSW7 474 aa30.06■■■□□ 2.4
HMGA2-207ENST00000537275 PIM2Q9P1W9 311 aa30.06■■■□□ 2.4
HMGA2-207ENST00000537275 G3BP1Q13283 466 aaKnown RBP eCLIP30.05■■■□□ 2.4
HMGA2-207ENST00000537275 PRPF40BQ6NWY9 871 aaKnown RBP30.05■■■□□ 2.4
HMGA2-207ENST00000537275 TMC4Q7Z404 712 aa30.05■■■□□ 2.4
HMGA2-207ENST00000537275 TTLL6Q8N841 843 aa30.05■■■□□ 2.4
HMGA2-207ENST00000537275 WWC3Q9ULE0 1092 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms