RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 HAUS7Q99871 368 aa22.42■■□□□ 1.18
COPS7A-204ENST00000534947 ANO8Q9HCE9 1232 aaPredicted RBP22.42■■□□□ 1.18
COPS7A-204ENST00000534947 MTMR6Q9Y217 621 aa22.42■■□□□ 1.18
COPS7A-204ENST00000534947 GADD45BO75293 160 aaPredicted RBP22.41■■□□□ 1.18
COPS7A-204ENST00000534947 TAF5LO75529 589 aa22.41■■□□□ 1.18
COPS7A-204ENST00000534947 ZCRB1Q8TBF4 217 aaKnown RBP22.41■■□□□ 1.18
COPS7A-204ENST00000534947 KCPQ6ZWJ8 1503 aa22.41■■□□□ 1.18
COPS7A-204ENST00000534947 TJP1Q07157 1748 aa22.41■■□□□ 1.18
COPS7A-204ENST00000534947 CNPY2Q9Y2B0 182 aa22.41■■□□□ 1.18
COPS7A-204ENST00000534947 GDPD2Q9HCC8 539 aa22.4■■□□□ 1.18
COPS7A-204ENST00000534947 COL5A2P05997 1499 aaPredicted RBP22.4■■□□□ 1.18
COPS7A-204ENST00000534947 ST3GAL1Q11201 340 aa22.4■■□□□ 1.18
COPS7A-204ENST00000534947 UVSSAQ2YD98 709 aa22.4■■□□□ 1.18
COPS7A-204ENST00000534947 TPCN1Q9ULQ1 816 aa22.4■■□□□ 1.18
COPS7A-204ENST00000534947 TNS2Q63HR2 1409 aa22.39■■□□□ 1.18
COPS7A-204ENST00000534947 SPEF2Q9C093 1822 aa22.39■■□□□ 1.17
COPS7A-204ENST00000534947 NBPF26B4DH59 902 aa22.39■■□□□ 1.17
COPS7A-204ENST00000534947 NBPF14Q5TI25 921 aa22.39■■□□□ 1.17
COPS7A-204ENST00000534947 NBPF10Q6P3W6 841 aaKnown RBP22.39■■□□□ 1.17
COPS7A-204ENST00000534947 BRINP3Q76B58 766 aa22.39■■□□□ 1.17
COPS7A-204ENST00000534947 NBPF15Q8N660 670 aa22.39■■□□□ 1.17
COPS7A-204ENST00000534947 LARP6Q9BRS8 491 aaKnown RBP22.39■■□□□ 1.17
COPS7A-204ENST00000534947 CWC25Q9NXE8 425 aaPredicted RBP22.39■■□□□ 1.17
COPS7A-204ENST00000534947 U3KPZ7 1027 aaPredicted RBP22.39■■□□□ 1.17
COPS7A-204ENST00000534947 ATP5J2-PTCD1G3V325 749 aa22.38■■□□□ 1.17
COPS7A-204ENST00000534947 PTCD1O75127 700 aaKnown RBP22.38■■□□□ 1.17
COPS7A-204ENST00000534947 MSNP26038 577 aaKnown RBP22.38■■□□□ 1.17
COPS7A-204ENST00000534947 MCM5P33992 734 aa22.38■■□□□ 1.17
COPS7A-204ENST00000534947 FOXO4P98177 505 aa22.38■■□□□ 1.17
COPS7A-204ENST00000534947 ZNF589Q86UQ0 364 aaPredicted RBP22.38■■□□□ 1.17
COPS7A-204ENST00000534947 ATG3Q9NT62 314 aa22.38■■□□□ 1.17
COPS7A-204ENST00000534947 NOL7Q9UMY1 257 aaKnown RBP22.38■■□□□ 1.17
COPS7A-204ENST00000534947 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
COPS7A-204ENST00000534947 CCDC191Q8NCU4 936 aa22.38■■□□□ 1.17
COPS7A-204ENST00000534947 PRDM11Q9NQV5 511 aa22.38■■□□□ 1.17
COPS7A-204ENST00000534947 SHANK3Q9BYB0 1731 aa22.38■■□□□ 1.17
COPS7A-204ENST00000534947 LMBR1LQ6UX01 489 aa22.37■■□□□ 1.17
COPS7A-204ENST00000534947 ABCA3Q99758 1704 aa22.37■■□□□ 1.17
COPS7A-204ENST00000534947 SOS2Q07890 1332 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-204ENST00000534947 SH3TC1Q8TE82 1336 aa22.37■■□□□ 1.17
COPS7A-204ENST00000534947 PIP4K2AP48426 406 aaPredicted RBP22.36■■□□□ 1.17
COPS7A-204ENST00000534947 FOXD4L6Q3SYB3 417 aaPredicted RBP22.36■■□□□ 1.17
COPS7A-204ENST00000534947 MCMDC2Q4G0Z9 681 aa22.36■■□□□ 1.17
COPS7A-204ENST00000534947 FOXD4L3Q6VB84 417 aaPredicted RBP22.36■■□□□ 1.17
COPS7A-204ENST00000534947 KBTBD3Q8NAB2 608 aa22.36■■□□□ 1.17
COPS7A-204ENST00000534947 DBNDD2Q9BQY9 259 aa22.36■■□□□ 1.17
COPS7A-204ENST00000534947 CARD10Q9BWT7 1032 aa22.36■■□□□ 1.17
COPS7A-204ENST00000534947 ZNF609O15014 1411 aa22.35■■□□□ 1.17
COPS7A-204ENST00000534947 IL15P40933 162 aaPredicted RBP22.35■■□□□ 1.17
COPS7A-204ENST00000534947 TOM1L2Q6ZVM7 507 aa22.35■■□□□ 1.17
COPS7A-204ENST00000534947 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.35■■□□□ 1.17
COPS7A-204ENST00000534947 CCDC39Q9UFE4 941 aa22.35■■□□□ 1.17
COPS7A-204ENST00000534947 TOB2Q14106 344 aaPredicted RBP22.35■■□□□ 1.17
COPS7A-204ENST00000534947 LARP1BQ659C4 914 aaKnown RBP22.35■■□□□ 1.17
COPS7A-204ENST00000534947 CIAO1O76071 339 aa22.34■■□□□ 1.17
COPS7A-204ENST00000534947 IL2RBP14784 551 aa22.34■■□□□ 1.17
COPS7A-204ENST00000534947 ELP1O95163 1332 aa22.34■■□□□ 1.17
COPS7A-204ENST00000534947 ATG9AQ7Z3C6 839 aa22.33■■□□□ 1.17
COPS7A-204ENST00000534947 NECAB1Q8N987 351 aa22.33■■□□□ 1.17
COPS7A-204ENST00000534947 JARID2Q92833 1246 aaPredicted RBP22.33■■□□□ 1.17
COPS7A-204ENST00000534947 HELLSQ9NRZ9 838 aa22.33■■□□□ 1.17
COPS7A-204ENST00000534947 ZNF500O60304 480 aaPredicted RBP22.33■■□□□ 1.16
COPS7A-204ENST00000534947 EDC3Q96F86 508 aaKnown RBP22.33■■□□□ 1.16
COPS7A-204ENST00000534947 NEK1Q96PY6 1258 aa22.33■■□□□ 1.16
COPS7A-204ENST00000534947 FIBPO43427 364 aa22.32■■□□□ 1.16
COPS7A-204ENST00000534947 HMGB1P09429 215 aaKnown RBP22.32■■□□□ 1.16
COPS7A-204ENST00000534947 DNM1Q05193 864 aaKnown RBP22.32■■□□□ 1.16
COPS7A-204ENST00000534947 FBXO3Q9UK99 471 aa22.32■■□□□ 1.16
COPS7A-204ENST00000534947 VPS37CA5D8V6 355 aaPredicted RBP22.31■■□□□ 1.16
COPS7A-204ENST00000534947 KRT85P78386 507 aa22.31■■□□□ 1.16
COPS7A-204ENST00000534947 TTLL7Q6ZT98 887 aa22.31■■□□□ 1.16
COPS7A-204ENST00000534947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.31■■□□□ 1.16
COPS7A-204ENST00000534947 NAP1L5Q96NT1 182 aaPredicted RBP22.31■■□□□ 1.16
COPS7A-204ENST00000534947 DNAJC2Q99543 621 aaKnown RBP22.31■■□□□ 1.16
COPS7A-204ENST00000534947 EYA2O00167 538 aa22.3■■□□□ 1.16
COPS7A-204ENST00000534947 DSCC1Q9BVC3 393 aa22.3■■□□□ 1.16
COPS7A-204ENST00000534947 ZKSCAN5Q9Y2L8 839 aa22.3■■□□□ 1.16
COPS7A-204ENST00000534947 RNF214Q8ND24 703 aa22.3■■□□□ 1.16
COPS7A-204ENST00000534947 DDX54Q8TDD1 881 aaKnown RBP22.3■■□□□ 1.16
COPS7A-204ENST00000534947 GTF3C6Q969F1 213 aa22.29■■□□□ 1.16
COPS7A-204ENST00000534947 TAF6LQ9Y6J9 622 aa22.29■■□□□ 1.16
COPS7A-204ENST00000534947 OFD1O75665 1012 aa22.28■■□□□ 1.16
COPS7A-204ENST00000534947 TRIM28Q13263 835 aaKnown RBP22.28■■□□□ 1.16
COPS7A-204ENST00000534947 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.28■■□□□ 1.16
COPS7A-204ENST00000534947 SCAND2PQ9GZW5 306 aaPredicted RBP22.28■■□□□ 1.16
COPS7A-204ENST00000534947 PAG1Q9NWQ8 432 aa22.28■■□□□ 1.16
COPS7A-204ENST00000534947 CHMP3Q9Y3E7 222 aa22.28■■□□□ 1.16
COPS7A-204ENST00000534947 ISCA1Q9BUE6 129 aa22.28■■□□□ 1.16
COPS7A-204ENST00000534947 TEX13AQ9BXU3 409 aaPredicted RBP22.28■■□□□ 1.16
COPS7A-204ENST00000534947 A1BGP04217 495 aa22.27■■□□□ 1.16
COPS7A-204ENST00000534947 LLPHQ9BRT6 129 aaKnown RBP22.27■■□□□ 1.16
COPS7A-204ENST00000534947 TOGARAM1Q9Y4F4 1720 aa22.27■■□□□ 1.16
COPS7A-204ENST00000534947 LAMA4Q16363 1823 aa22.27■■□□□ 1.16
COPS7A-204ENST00000534947 CYP21A2P08686 494 aa22.26■■□□□ 1.15
COPS7A-204ENST00000534947 ZMYM1Q5SVZ6 1142 aa22.26■■□□□ 1.15
COPS7A-204ENST00000534947 DDX46Q7L014 1031 aaKnown RBP22.26■■□□□ 1.15
COPS7A-204ENST00000534947 CDC37L1Q7L3B6 337 aa22.26■■□□□ 1.15
COPS7A-204ENST00000534947 VSIG10Q8N0Z9 540 aa22.26■■□□□ 1.15
COPS7A-204ENST00000534947 FUCA2Q9BTY2 467 aa22.26■■□□□ 1.15
COPS7A-204ENST00000534947 TERF1P54274 439 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms