RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 GOLGA2Q08379 1002 aa12.43□□□□□ -0.42
SSBP3-215ENST00000533946 GRAPQ13588 217 aa12.43□□□□□ -0.42
SSBP3-215ENST00000533946 SF3B3Q15393 1217 aaKnown RBP12.43□□□□□ -0.42
SSBP3-215ENST00000533946 GRAPLQ8TC17 118 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-215ENST00000533946 CDCA7LQ96GN5 454 aa12.43□□□□□ -0.42
SSBP3-215ENST00000533946 PSMD1Q99460 953 aa12.43□□□□□ -0.42
SSBP3-215ENST00000533946 GJA3Q9Y6H8 435 aa12.43□□□□□ -0.42
SSBP3-215ENST00000533946 SPEF2Q9C093 1822 aa12.43□□□□□ -0.42
SSBP3-215ENST00000533946 LRRC37AA6NMS7 1700 aa12.42□□□□□ -0.42
SSBP3-215ENST00000533946 YDJCA8MPS7 323 aa12.42□□□□□ -0.42
SSBP3-215ENST00000533946 SOGA3Q5TF21 947 aa12.42□□□□□ -0.42
SSBP3-215ENST00000533946 KSR2Q6VAB6 950 aa12.42□□□□□ -0.42
SSBP3-215ENST00000533946 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
SSBP3-215ENST00000533946 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
SSBP3-215ENST00000533946 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-215ENST00000533946 ZBTB38Q8NAP3 1195 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-215ENST00000533946 TAF1DQ9H5J8 278 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-215ENST00000533946 POLLQ9UGP5 575 aa12.42□□□□□ -0.42
SSBP3-215ENST00000533946 NEURL1BA8MQ27 555 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 RIMBP2O15034 1052 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 PPIP5K2O43314 1243 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 EPS15P42566 896 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 SCNN1DP51172 638 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 CASP7P55210 303 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 FLIIQ13045 1269 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 DLK2Q6UY11 383 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 DDX46Q7L014 1031 aaKnown RBP12.41□□□□□ -0.42
SSBP3-215ENST00000533946 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 SCN9AQ15858 1988 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 ADAMTSL1Q8N6G6 1762 aa12.41□□□□□ -0.42
SSBP3-215ENST00000533946 BBOX1O75936 387 aa12.4□□□□□ -0.42
SSBP3-215ENST00000533946 RAD17O75943 681 aa12.4□□□□□ -0.42
SSBP3-215ENST00000533946 PCCAP05165 728 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-215ENST00000533946 CXCL9Q07325 125 aa12.4□□□□□ -0.42
SSBP3-215ENST00000533946 MPNDQ8N594 471 aa12.4□□□□□ -0.42
SSBP3-215ENST00000533946 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-215ENST00000533946 RTFDC1Q9BY42 306 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-215ENST00000533946 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-215ENST00000533946 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
SSBP3-215ENST00000533946 EAPPQ56P03 285 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-215ENST00000533946 EPHA10Q5JZY3 1008 aa12.39□□□□□ -0.43
SSBP3-215ENST00000533946 MAP1SQ66K74 1059 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-215ENST00000533946 DPP8Q6V1X1 898 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-215ENST00000533946 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
SSBP3-215ENST00000533946 CCDC191Q8NCU4 936 aa12.39□□□□□ -0.43
SSBP3-215ENST00000533946 GREM2Q9H772 168 aa12.39□□□□□ -0.43
SSBP3-215ENST00000533946 SCN4AP35499 1836 aa12.39□□□□□ -0.43
SSBP3-215ENST00000533946 H7C1W4 665 aa12.38□□□□□ -0.43
SSBP3-215ENST00000533946 SNAP23O00161 211 aa12.38□□□□□ -0.43
SSBP3-215ENST00000533946 ITGBL1O95965 494 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-215ENST00000533946 APLP1P51693 650 aa12.38□□□□□ -0.43
SSBP3-215ENST00000533946 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
SSBP3-215ENST00000533946 FSTL1Q12841 308 aa12.38□□□□□ -0.43
SSBP3-215ENST00000533946 SMC1BQ8NDV3 1235 aa12.38□□□□□ -0.43
SSBP3-215ENST00000533946 TTLL11Q8NHH1 800 aa12.38□□□□□ -0.43
SSBP3-215ENST00000533946 DBNDD1Q9H9R9 158 aa12.38□□□□□ -0.43
SSBP3-215ENST00000533946 NSFL1CQ9UNZ2 370 aaKnown RBP12.38□□□□□ -0.43
SSBP3-215ENST00000533946 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-215ENST00000533946 EGFRP00533 1210 aa12.37□□□□□ -0.43
SSBP3-215ENST00000533946 EPHX2P34913 555 aa12.37□□□□□ -0.43
SSBP3-215ENST00000533946 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-215ENST00000533946 GCKRQ14397 625 aa12.37□□□□□ -0.43
SSBP3-215ENST00000533946 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
SSBP3-215ENST00000533946 CC2D2BQ6DHV5 1058 aa12.37□□□□□ -0.43
SSBP3-215ENST00000533946 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
SSBP3-215ENST00000533946 STK31Q9BXU1 1019 aa12.37□□□□□ -0.43
SSBP3-215ENST00000533946 MYH3P11055 1940 aa12.37□□□□□ -0.43
SSBP3-215ENST00000533946 RTL9Q8NET4 1388 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 PDE8AO60658 829 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 KLRK1P26718 216 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-215ENST00000533946 HIRAP54198 1017 aaPredicted RBP12.36□□□□□ -0.43
SSBP3-215ENST00000533946 KIAA2012Q0VF49 1180 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 NIM1KQ8IY84 436 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 MIER1Q8N108 512 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 GPC2Q8N158 579 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 TBC1D16Q8TBP0 767 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 DNAAF4Q8WXU2 420 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 JDP2Q8WYK2 163 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 HACL1Q9UJ83 578 aa12.36□□□□□ -0.43
SSBP3-215ENST00000533946 C6orf229H3BNL8 230 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 TRAF5O00463 557 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 DDX58O95786 925 aaKnown RBP12.35□□□□□ -0.43
SSBP3-215ENST00000533946 CTSWP56202 376 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
SSBP3-215ENST00000533946 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 BEND3Q5T5X7 828 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 TXNRD3Q86VQ6 643 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 TRPM4Q8TD43 1214 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 MXD3Q9BW11 206 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 ZNRF3Q9ULT6 936 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 PASKQ96RG2 1323 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
SSBP3-215ENST00000533946 CACNA1FO60840 1977 aa12.34□□□□□ -0.43
SSBP3-215ENST00000533946 PSMD14O00487 310 aa12.34□□□□□ -0.43
SSBP3-215ENST00000533946 FOXO4P98177 505 aa12.34□□□□□ -0.43
SSBP3-215ENST00000533946 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms