RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 PI4KAP2A4QPH2 592 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 ERC2O15083 957 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
CHKA-207ENST00000533728 MX1P20591 662 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 DDIT3P35638 169 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 ZNF790Q6PG37 636 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 PI4KAP1Q8N8J0 262 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 SYTL4Q96C24 671 aaPredicted RBP11.83□□□□□ -0.52
CHKA-207ENST00000533728 KIF1BPQ96EK5 621 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 IL17RAQ96F46 866 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 USP42Q9H9J4 1324 aaKnown RBP11.83□□□□□ -0.52
CHKA-207ENST00000533728 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
CHKA-207ENST00000533728 SMARCA5O60264 1052 aaPredicted RBP11.82□□□□□ -0.52
CHKA-207ENST00000533728 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
CHKA-207ENST00000533728 UNC80Q8N2C7 3258 aa11.82□□□□□ -0.52
CHKA-207ENST00000533728 PCDH11XQ9BZA7 1347 aa11.82□□□□□ -0.52
CHKA-207ENST00000533728 PCDH11YQ9BZA8 1340 aa11.82□□□□□ -0.52
CHKA-207ENST00000533728 K7ELQ4 463 aaPredicted RBP11.81□□□□□ -0.52
CHKA-207ENST00000533728 CA12O43570 354 aa11.81□□□□□ -0.52
CHKA-207ENST00000533728 PTMSP20962 102 aa11.81□□□□□ -0.52
CHKA-207ENST00000533728 PPP1R42Q7Z4L9 355 aa11.81□□□□□ -0.52
CHKA-207ENST00000533728 ERC1Q8IUD2 1116 aa11.81□□□□□ -0.52
CHKA-207ENST00000533728 OTUD7AQ8TE49 926 aaPredicted RBP11.81□□□□□ -0.52
CHKA-207ENST00000533728 CYP27B1O15528 508 aa11.8□□□□□ -0.52
CHKA-207ENST00000533728 FRAT2O75474 233 aaPredicted RBP11.8□□□□□ -0.52
CHKA-207ENST00000533728 MMP10P09238 476 aa11.8□□□□□ -0.52
CHKA-207ENST00000533728 ANAPC15P60006 121 aa11.8□□□□□ -0.52
CHKA-207ENST00000533728 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
CHKA-207ENST00000533728 SLKQ9H2G2 1235 aaPredicted RBP11.8□□□□□ -0.52
CHKA-207ENST00000533728 ABT1Q9ULW3 272 aaKnown RBP11.8□□□□□ -0.52
CHKA-207ENST00000533728 EXOC6BQ9Y2D4 811 aa11.8□□□□□ -0.52
CHKA-207ENST00000533728 TTC41PQ6P2S7 1318 aa11.8□□□□□ -0.52
CHKA-207ENST00000533728 PHF14O94880 888 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
CHKA-207ENST00000533728 LMNB1P20700 586 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 RASSF7Q02833 373 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 GSE1Q14687 1217 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 PDIA6Q15084 440 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 RHPN1Q8TCX5 695 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 CAPNS2Q96L46 248 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 GPR101Q96P66 508 aaPredicted RBP11.79□□□□□ -0.52
CHKA-207ENST00000533728 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 PIM2Q9P1W9 311 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
CHKA-207ENST00000533728 ERVV-2B6SEH9 535 aa11.78□□□□□ -0.52
CHKA-207ENST00000533728 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
CHKA-207ENST00000533728 SURF6O75683 361 aaKnown RBP11.78□□□□□ -0.52
CHKA-207ENST00000533728 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
CHKA-207ENST00000533728 KCNA3P22001 575 aa11.78□□□□□ -0.52
CHKA-207ENST00000533728 ECE1P42892 770 aa11.78□□□□□ -0.52
CHKA-207ENST00000533728 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
CHKA-207ENST00000533728 GRM1Q13255 1194 aa11.78□□□□□ -0.52
CHKA-207ENST00000533728 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
CHKA-207ENST00000533728 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
CHKA-207ENST00000533728 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
CHKA-207ENST00000533728 C4BP0C0L5 1744 aa11.77□□□□□ -0.52
CHKA-207ENST00000533728 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 GRM8O00222 908 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 ITGBL1O95965 494 aaPredicted RBP11.77□□□□□ -0.53
CHKA-207ENST00000533728 MCCP23508 829 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
CHKA-207ENST00000533728 MCM2P49736 904 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 NEXNQ0ZGT2 675 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 AMIGO3Q86WK7 504 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 LDHDQ86WU2 507 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 TTC5Q8N0Z6 440 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 AK7Q96M32 723 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 ESYT1Q9BSJ8 1104 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.53
CHKA-207ENST00000533728 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.53
CHKA-207ENST00000533728 TJP1Q07157 1748 aa11.77□□□□□ -0.53
CHKA-207ENST00000533728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.76□□□□□ -0.53
CHKA-207ENST00000533728 ST18O60284 1047 aa11.76□□□□□ -0.53
CHKA-207ENST00000533728 CHMLP26374 656 aa11.76□□□□□ -0.53
CHKA-207ENST00000533728 PROSER3Q2NL68 480 aa11.76□□□□□ -0.53
CHKA-207ENST00000533728 CLEC17AQ6ZS10 378 aa11.76□□□□□ -0.53
CHKA-207ENST00000533728 LRP10Q7Z4F1 713 aa11.76□□□□□ -0.53
CHKA-207ENST00000533728 NFATC2IPQ8NCF5 419 aa11.76□□□□□ -0.53
CHKA-207ENST00000533728 ANKRD36CQ5JPF3 1778 aa11.75□□□□□ -0.53
CHKA-207ENST00000533728 APBB1O00213 710 aa11.75□□□□□ -0.53
CHKA-207ENST00000533728 GLRX3O76003 335 aaKnown RBP11.75□□□□□ -0.53
CHKA-207ENST00000533728 MCM4P33991 863 aa11.75□□□□□ -0.53
CHKA-207ENST00000533728 CABP4P57796 275 aa11.75□□□□□ -0.53
CHKA-207ENST00000533728 RAB3GAP1Q15042 981 aa11.75□□□□□ -0.53
CHKA-207ENST00000533728 GPATCH3Q96I76 525 aa11.75□□□□□ -0.53
CHKA-207ENST00000533728 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
CHKA-207ENST00000533728 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
CHKA-207ENST00000533728 ANXA1P04083 346 aa11.74□□□□□ -0.53
CHKA-207ENST00000533728 CYP4F22Q6NT55 531 aa11.74□□□□□ -0.53
CHKA-207ENST00000533728 RIC3Q7Z5B4 369 aa11.74□□□□□ -0.53
CHKA-207ENST00000533728 CNTROBQ8N137 903 aa11.74□□□□□ -0.53
CHKA-207ENST00000533728 CLASRPQ8N2M8 674 aaKnown RBP11.74□□□□□ -0.53
CHKA-207ENST00000533728 PI4K2BQ8TCG2 481 aa11.74□□□□□ -0.53
CHKA-207ENST00000533728 DDX54Q8TDD1 881 aaKnown RBP11.74□□□□□ -0.53
CHKA-207ENST00000533728 GBP4Q96PP9 640 aa11.74□□□□□ -0.53
CHKA-207ENST00000533728 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
CHKA-207ENST00000533728 RANBP2P49792 3224 aaKnown RBP11.74□□□□□ -0.53
CHKA-207ENST00000533728 COL5A3P25940 1745 aaPredicted RBP11.74□□□□□ -0.53
CHKA-207ENST00000533728 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms