RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 SF3B3Q15393 1217 aaKnown RBP16.02■□□□□ 0.16
CAPRIN1-213ENST00000533562 AOC3Q16853 763 aa16.02■□□□□ 0.16
CAPRIN1-213ENST00000533562 CCDC27Q2M243 656 aa16.02■□□□□ 0.16
CAPRIN1-213ENST00000533562 IFFO2Q5TF58 517 aa16.02■□□□□ 0.16
CAPRIN1-213ENST00000533562 PHAXQ9H814 394 aaKnown RBP16.02■□□□□ 0.16
CAPRIN1-213ENST00000533562 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
CAPRIN1-213ENST00000533562 ANP32CO43423 234 aa16.01■□□□□ 0.15
CAPRIN1-213ENST00000533562 DDX58O95786 925 aaKnown RBP16.01■□□□□ 0.15
CAPRIN1-213ENST00000533562 CCDC184Q52MB2 194 aa16.01■□□□□ 0.15
CAPRIN1-213ENST00000533562 ZNRF3Q9ULT6 936 aa16.01■□□□□ 0.15
CAPRIN1-213ENST00000533562 IRS4O14654 1257 aaPredicted RBP16■□□□□ 0.15
CAPRIN1-213ENST00000533562 ITGBL1O95965 494 aaPredicted RBP16■□□□□ 0.15
CAPRIN1-213ENST00000533562 RTL5Q5HYW3 569 aaPredicted RBP16■□□□□ 0.15
CAPRIN1-213ENST00000533562 SLC51AQ86UW1 340 aa16■□□□□ 0.15
CAPRIN1-213ENST00000533562 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
CAPRIN1-213ENST00000533562 PASKQ96RG2 1323 aa15.99■□□□□ 0.15
CAPRIN1-213ENST00000533562 KIAA2012Q0VF49 1180 aa15.99■□□□□ 0.15
CAPRIN1-213ENST00000533562 WWC1Q8IX03 1113 aa15.99■□□□□ 0.15
CAPRIN1-213ENST00000533562 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
CAPRIN1-213ENST00000533562 CCDC191Q8NCU4 936 aa15.99■□□□□ 0.15
CAPRIN1-213ENST00000533562 MYD88Q99836 296 aa15.99■□□□□ 0.15
CAPRIN1-213ENST00000533562 MRS2Q9HD23 443 aa15.99■□□□□ 0.15
CAPRIN1-213ENST00000533562 SCNN1DP51172 638 aa15.98■□□□□ 0.15
CAPRIN1-213ENST00000533562 CXCL9Q07325 125 aa15.98■□□□□ 0.15
CAPRIN1-213ENST00000533562 STK31Q9BXU1 1019 aa15.98■□□□□ 0.15
CAPRIN1-213ENST00000533562 TMEM88BA6NKF7 163 aa15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 EPS15P42566 896 aa15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 RPS8P62241 208 aaKnown RBP15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 TNIP1Q15025 636 aa15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 MAP1SQ66K74 1059 aaPredicted RBP15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 USP50Q70EL3 339 aaPredicted RBP15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 TSPYL6Q8N831 410 aa15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 TSR2Q969E8 191 aaKnown RBP15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 METTL22Q9BUU2 404 aaPredicted RBP15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 CWC25Q9NXE8 425 aaPredicted RBP15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 NSFL1CQ9UNZ2 370 aaKnown RBP15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 COL4A5P29400 1685 aa15.97■□□□□ 0.15
CAPRIN1-213ENST00000533562 IL16Q14005 1332 aa15.96■□□□□ 0.15
CAPRIN1-213ENST00000533562 LAMB2P55268 1798 aa15.96■□□□□ 0.15
CAPRIN1-213ENST00000533562 PCCAP05165 728 aaPredicted RBP15.96■□□□□ 0.15
CAPRIN1-213ENST00000533562 WASHC4Q2M389 1173 aa15.96■□□□□ 0.15
CAPRIN1-213ENST00000533562 CIAPIN1Q6FI81 312 aa15.96■□□□□ 0.15
CAPRIN1-213ENST00000533562 KSR2Q6VAB6 950 aa15.96■□□□□ 0.15
CAPRIN1-213ENST00000533562 CELF1Q92879 486 aaKnown RBP15.96■□□□□ 0.15
CAPRIN1-213ENST00000533562 MKRN1Q9UHC7 482 aaKnown RBP15.96■□□□□ 0.15
CAPRIN1-213ENST00000533562 TWISTNBQ3B726 338 aaPredicted RBP15.95■□□□□ 0.14
CAPRIN1-213ENST00000533562 ADARB2Q9NS39 739 aaKnown RBP15.95■□□□□ 0.14
CAPRIN1-213ENST00000533562 GPRC5DQ9NZD1 345 aa15.95■□□□□ 0.14
CAPRIN1-213ENST00000533562 MAP3K2Q9Y2U5 619 aa15.95■□□□□ 0.14
CAPRIN1-213ENST00000533562 PI4KAP2A4QPH2 592 aa15.94■□□□□ 0.14
CAPRIN1-213ENST00000533562 C6orf229H3BNL8 230 aa15.94■□□□□ 0.14
CAPRIN1-213ENST00000533562 PDE8AO60658 829 aa15.94■□□□□ 0.14
CAPRIN1-213ENST00000533562 NEXNQ0ZGT2 675 aa15.94■□□□□ 0.14
CAPRIN1-213ENST00000533562 CCDC152Q4G0S7 254 aa15.94■□□□□ 0.14
CAPRIN1-213ENST00000533562 PIAS4Q8N2W9 510 aaPredicted RBP15.94■□□□□ 0.14
CAPRIN1-213ENST00000533562 PI4KAP1Q8N8J0 262 aa15.94■□□□□ 0.14
CAPRIN1-213ENST00000533562 BCL2L13Q9BXK5 485 aa15.94■□□□□ 0.14
CAPRIN1-213ENST00000533562 RAD17O75943 681 aa15.93■□□□□ 0.14
CAPRIN1-213ENST00000533562 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
CAPRIN1-213ENST00000533562 EYA3Q99504 573 aa15.93■□□□□ 0.14
CAPRIN1-213ENST00000533562 TAF1P21675 1872 aa15.93■□□□□ 0.14
CAPRIN1-213ENST00000533562 CDHR2Q9BYE9 1310 aa15.93■□□□□ 0.14
CAPRIN1-213ENST00000533562 CNTNAP1P78357 1384 aa15.92■□□□□ 0.14
CAPRIN1-213ENST00000533562 DDX60Q8IY21 1712 aaKnown RBP15.92■□□□□ 0.14
CAPRIN1-213ENST00000533562 HSPA1AP0DMV8 641 aaKnown RBP15.92■□□□□ 0.14
CAPRIN1-213ENST00000533562 HSPA1BP0DMV9 641 aaKnown RBP15.92■□□□□ 0.14
CAPRIN1-213ENST00000533562 GMPSP49915 693 aaPredicted RBP15.92■□□□□ 0.14
CAPRIN1-213ENST00000533562 GPSM2P81274 684 aa15.92■□□□□ 0.14
CAPRIN1-213ENST00000533562 WDR63Q8IWG1 891 aa15.92■□□□□ 0.14
CAPRIN1-213ENST00000533562 POLLQ9UGP5 575 aa15.92■□□□□ 0.14
CAPRIN1-213ENST00000533562 ADAMTSL1Q8N6G6 1762 aa15.91■□□□□ 0.14
CAPRIN1-213ENST00000533562 RIMBP2O15034 1052 aa15.91■□□□□ 0.14
CAPRIN1-213ENST00000533562 DEFB115Q30KQ5 88 aa15.91■□□□□ 0.14
CAPRIN1-213ENST00000533562 ZC3H12CQ9C0D7 883 aaKnown RBP15.91■□□□□ 0.14
CAPRIN1-213ENST00000533562 SEC31BQ9NQW1 1179 aa15.91■□□□□ 0.14
CAPRIN1-213ENST00000533562 ANKIB1Q9P2G1 1089 aa15.91■□□□□ 0.14
CAPRIN1-213ENST00000533562 SALL2Q9Y467 1007 aaPredicted RBP15.91■□□□□ 0.14
CAPRIN1-213ENST00000533562 YDJCA8MPS7 323 aa15.9■□□□□ 0.14
CAPRIN1-213ENST00000533562 H7C1D1 291 aa15.9■□□□□ 0.14
CAPRIN1-213ENST00000533562 TBC1D16Q8TBP0 767 aa15.9■□□□□ 0.14
CAPRIN1-213ENST00000533562 ZC3H15Q8WU90 426 aaKnown RBP15.9■□□□□ 0.14
CAPRIN1-213ENST00000533562 JARID2Q92833 1246 aaPredicted RBP15.9■□□□□ 0.14
CAPRIN1-213ENST00000533562 PODXL2Q9NZ53 605 aa15.9■□□□□ 0.14
CAPRIN1-213ENST00000533562 CNOT7Q9UIV1 285 aaKnown RBP15.9■□□□□ 0.14
CAPRIN1-213ENST00000533562 ABT1Q9ULW3 272 aaKnown RBP15.9■□□□□ 0.14
CAPRIN1-213ENST00000533562 G3V3G9 751 aa15.89■□□□□ 0.13
CAPRIN1-213ENST00000533562 IGKV5-2P06315 115 aa15.89■□□□□ 0.13
CAPRIN1-213ENST00000533562 VEGFBP49765 207 aa15.89■□□□□ 0.13
CAPRIN1-213ENST00000533562 DCAF8Q5TAQ9 597 aa15.89■□□□□ 0.13
CAPRIN1-213ENST00000533562 COL13A1Q5TAT6 717 aaPredicted RBP15.89■□□□□ 0.13
CAPRIN1-213ENST00000533562 ANKRD18AQ8IVF6 992 aa15.89■□□□□ 0.13
CAPRIN1-213ENST00000533562 DPF2Q92785 391 aa15.89■□□□□ 0.13
CAPRIN1-213ENST00000533562 DBNDD1Q9H9R9 158 aa15.89■□□□□ 0.13
CAPRIN1-213ENST00000533562 LTBP1Q14766 1721 aa15.88■□□□□ 0.13
CAPRIN1-213ENST00000533562 RASSF10A6NK89 507 aa15.88■□□□□ 0.13
CAPRIN1-213ENST00000533562 G2E3Q7L622 706 aa15.88■□□□□ 0.13
CAPRIN1-213ENST00000533562 CCDC85AQ96PX6 553 aaPredicted RBP15.88■□□□□ 0.13
CAPRIN1-213ENST00000533562 CDC5LQ99459 802 aaKnown RBP15.88■□□□□ 0.13
CAPRIN1-213ENST00000533562 GGA1Q9UJY5 639 aa15.88■□□□□ 0.13
CAPRIN1-213ENST00000533562 FANCIQ9NVI1 1328 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms