RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 DEFB115Q30KQ5 88 aa29.73■■■□□ 2.35
PKP3-210ENST00000533249 ANKRD13DQ6ZTN6 518 aa29.73■■■□□ 2.35
PKP3-210ENST00000533249 USP50Q70EL3 339 aaPredicted RBP29.73■■■□□ 2.35
PKP3-210ENST00000533249 ABT1Q9ULW3 272 aaKnown RBP29.73■■■□□ 2.35
PKP3-210ENST00000533249 RASSF10A6NK89 507 aa29.72■■■□□ 2.35
PKP3-210ENST00000533249 ATP5J2-PTCD1G3V325 749 aa29.72■■■□□ 2.35
PKP3-210ENST00000533249 FMR1Q06787 632 aaKnown RBP eCLIP29.72■■■□□ 2.352e-7■■■□□ 15.6
PKP3-210ENST00000533249 DUSP27Q5VZP5 1158 aa29.72■■■□□ 2.35
PKP3-210ENST00000533249 CFAP44Q96MT7 982 aa29.72■■■□□ 2.35
PKP3-210ENST00000533249 AIDAQ96BJ3 306 aa29.71■■■□□ 2.35
PKP3-210ENST00000533249 GPRC5DQ9NZD1 345 aa29.71■■■□□ 2.35
PKP3-210ENST00000533249 DDX60Q8IY21 1712 aaKnown RBP29.71■■■□□ 2.35
PKP3-210ENST00000533249 KIAA2012Q0VF49 1180 aa29.7■■■□□ 2.35
PKP3-210ENST00000533249 FAM89AQ96GI7 184 aa29.7■■■□□ 2.35
PKP3-210ENST00000533249 ISCA1Q9BUE6 129 aa29.7■■■□□ 2.35
PKP3-210ENST00000533249 MBIPQ9NS73 344 aa29.7■■■□□ 2.35
PKP3-210ENST00000533249 GMPSP49915 693 aaPredicted RBP29.69■■■□□ 2.34
PKP3-210ENST00000533249 PRKRIP1Q9H875 184 aaPredicted RBP29.69■■■□□ 2.34
PKP3-210ENST00000533249 ADARB2Q9NS39 739 aaKnown RBP29.69■■■□□ 2.34
PKP3-210ENST00000533249 HYPKQ9NX55 129 aa29.69■■■□□ 2.34
PKP3-210ENST00000533249 RTL5Q5HYW3 569 aaPredicted RBP29.68■■■□□ 2.34
PKP3-210ENST00000533249 CIAPIN1Q6FI81 312 aa29.68■■■□□ 2.34
PKP3-210ENST00000533249 TRAF5O00463 557 aa29.67■■■□□ 2.34
PKP3-210ENST00000533249 RAD17O75943 681 aa29.67■■■□□ 2.34
PKP3-210ENST00000533249 TMC4Q7Z404 712 aa29.66■■■□□ 2.34
PKP3-210ENST00000533249 WDR33Q9C0J8 1336 aaKnown RBP29.66■■■□□ 2.34
PKP3-210ENST00000533249 APAF1O14727 1248 aa29.65■■■□□ 2.34
PKP3-210ENST00000533249 CTCFP49711 727 aaPredicted RBP29.65■■■□□ 2.34
PKP3-210ENST00000533249 BCL2L13Q9BXK5 485 aa29.65■■■□□ 2.34
PKP3-210ENST00000533249 WBP1LQ9NX94 342 aa29.65■■■□□ 2.34
PKP3-210ENST00000533249 LRRC37AA6NMS7 1700 aa29.65■■■□□ 2.34
PKP3-210ENST00000533249 DUOX1Q9NRD9 1551 aa29.64■■■□□ 2.34
PKP3-210ENST00000533249 TNIP1Q15025 636 aa29.64■■■□□ 2.34
PKP3-210ENST00000533249 PAXIP1Q6ZW49 1069 aaPredicted RBP29.64■■■□□ 2.34
PKP3-210ENST00000533249 CELF1Q92879 486 aaKnown RBP29.64■■■□□ 2.34
PKP3-210ENST00000533249 TRPM7Q96QT4 1865 aa29.63■■■□□ 2.33
PKP3-210ENST00000533249 ELL2O00472 640 aaPredicted RBP29.63■■■□□ 2.33
PKP3-210ENST00000533249 ZNF853P0CG23 659 aa29.63■■■□□ 2.33
PKP3-210ENST00000533249 SF3B3Q15393 1217 aaKnown RBP29.63■■■□□ 2.33
PKP3-210ENST00000533249 PRDM10Q9NQV6 1147 aa29.63■■■□□ 2.33
PKP3-210ENST00000533249 RIC3Q7Z5B4 369 aa29.62■■■□□ 2.33
PKP3-210ENST00000533249 NSFL1CQ9UNZ2 370 aaKnown RBP29.62■■■□□ 2.33
PKP3-210ENST00000533249 YDJCA8MPS7 323 aa29.61■■■□□ 2.33
PKP3-210ENST00000533249 GOLGA2Q08379 1002 aa29.61■■■□□ 2.33
PKP3-210ENST00000533249 GRM1Q13255 1194 aa29.61■■■□□ 2.33
PKP3-210ENST00000533249 CST9Q5W186 159 aa29.61■■■□□ 2.33
PKP3-210ENST00000533249 PHAXQ9H814 394 aaKnown RBP29.61■■■□□ 2.33
PKP3-210ENST00000533249 IFT57Q9NWB7 429 aa29.61■■■□□ 2.33
PKP3-210ENST00000533249 IRS4O14654 1257 aaPredicted RBP29.6■■■□□ 2.33
PKP3-210ENST00000533249 GNAI1P63096 354 aa29.6■■■□□ 2.33
PKP3-210ENST00000533249 TRIM28Q13263 835 aaKnown RBP29.6■■■□□ 2.33
PKP3-210ENST00000533249 CDHR2Q9BYE9 1310 aa29.6■■■□□ 2.33
PKP3-210ENST00000533249 COL4A1P02462 1669 aa29.6■■■□□ 2.33
PKP3-210ENST00000533249 LBX1P52954 281 aa29.59■■■□□ 2.33
PKP3-210ENST00000533249 CALD1Q05682 793 aaKnown RBP29.59■■■□□ 2.33
PKP3-210ENST00000533249 WASHC4Q2M389 1173 aa29.59■■■□□ 2.33
PKP3-210ENST00000533249 CAPNS2Q96L46 248 aa29.59■■■□□ 2.33
PKP3-210ENST00000533249 C6orf229H3BNL8 230 aa29.58■■■□□ 2.33
PKP3-210ENST00000533249 RIMBP2O15034 1052 aa29.58■■■□□ 2.33
PKP3-210ENST00000533249 MAP2K1Q02750 393 aaPredicted RBP29.58■■■□□ 2.33
PKP3-210ENST00000533249 GLIS2Q9BZE0 524 aaPredicted RBP29.58■■■□□ 2.33
PKP3-210ENST00000533249 SHTN1A0MZ66 631 aa29.57■■■□□ 2.32
PKP3-210ENST00000533249 GPSM2P81274 684 aa29.57■■■□□ 2.32
PKP3-210ENST00000533249 CYP4F22Q6NT55 531 aa29.57■■■□□ 2.32
PKP3-210ENST00000533249 TRPM4Q8TD43 1214 aa29.57■■■□□ 2.32
PKP3-210ENST00000533249 DBNDD1Q9H9R9 158 aa29.57■■■□□ 2.32
PKP3-210ENST00000533249 CNOT7Q9UIV1 285 aaKnown RBP29.57■■■□□ 2.32
PKP3-210ENST00000533249 ECE1P42892 770 aa29.56■■■□□ 2.32
PKP3-210ENST00000533249 HIRAP54198 1017 aaPredicted RBP29.56■■■□□ 2.32
PKP3-210ENST00000533249 MYD88Q99836 296 aa29.56■■■□□ 2.32
PKP3-210ENST00000533249 ZBTB12Q9Y330 459 aaPredicted RBP29.56■■■□□ 2.32
PKP3-210ENST00000533249 TLL2Q9Y6L7 1015 aa29.56■■■□□ 2.32
PKP3-210ENST00000533249 CELF2O95319 508 aaKnown RBP29.55■■■□□ 2.32
PKP3-210ENST00000533249 POLLQ9UGP5 575 aa29.55■■■□□ 2.32
PKP3-210ENST00000533249 H7C1D1 291 aa29.54■■■□□ 2.32
PKP3-210ENST00000533249 HSPA8P11142 646 aaKnown RBP29.54■■■□□ 2.32
PKP3-210ENST00000533249 RPS8P62241 208 aaKnown RBP29.54■■■□□ 2.32
PKP3-210ENST00000533249 MICALL2Q8IY33 904 aa29.54■■■□□ 2.32
PKP3-210ENST00000533249 ZBTB38Q8NAP3 1195 aaPredicted RBP29.54■■■□□ 2.32
PKP3-210ENST00000533249 C8orf58Q8NAV2 365 aa29.54■■■□□ 2.32
PKP3-210ENST00000533249 PGAP2Q9UHJ9 254 aa29.54■■■□□ 2.32
PKP3-210ENST00000533249 PSMD14O00487 310 aa29.53■■■□□ 2.32
PKP3-210ENST00000533249 ZC3H15Q8WU90 426 aaKnown RBP29.53■■■□□ 2.32
PKP3-210ENST00000533249 GPR101Q96P66 508 aaPredicted RBP29.53■■■□□ 2.32
PKP3-210ENST00000533249 ZNF408Q9H9D4 720 aa29.53■■■□□ 2.32
PKP3-210ENST00000533249 THSD7BQ9C0I4 1608 aa29.53■■■□□ 2.32
PKP3-210ENST00000533249 DOK7Q18PE1 504 aa29.52■■■□□ 2.32
PKP3-210ENST00000533249 EYA3Q99504 573 aa29.52■■■□□ 2.32
PKP3-210ENST00000533249 SEC31BQ9NQW1 1179 aa29.52■■■□□ 2.32
PKP3-210ENST00000533249 JARID2Q92833 1246 aaPredicted RBP29.51■■■□□ 2.31
PKP3-210ENST00000533249 ECE2O60344 883 aa29.5■■■□□ 2.31
PKP3-210ENST00000533249 TBC1D16Q8TBP0 767 aa29.5■■■□□ 2.31
PKP3-210ENST00000533249 HSP90B1P14625 803 aaKnown RBP29.49■■■□□ 2.31
PKP3-210ENST00000533249 CDC37L1Q7L3B6 337 aa29.49■■■□□ 2.31
PKP3-210ENST00000533249 SAMD7Q7Z3H4 446 aa29.49■■■□□ 2.31
PKP3-210ENST00000533249 SAPCD2Q86UD0 394 aa29.49■■■□□ 2.31
PKP3-210ENST00000533249 CCDC191Q8NCU4 936 aa29.49■■■□□ 2.31
PKP3-210ENST00000533249 DPF2Q92785 391 aa29.49■■■□□ 2.31
PKP3-210ENST00000533249 BEGAINQ9BUH8 593 aa29.49■■■□□ 2.31
PKP3-210ENST00000533249 KCNQ5Q9NR82 932 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms