RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 CCDC50Q8IVM0 306 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 HECW2Q9P2P5 1572 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 RFC1P35251 1148 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 ARHGAP29Q52LW3 1261 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 NPATQ14207 1427 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 ZPR1O75312 459 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 WDHD1O75717 1129 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 MXRA7P84157 204 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 MFSD4BQ5TF39 518 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 PPFIBP1Q86W92 1011 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 NOB1Q9ULX3 412 aaKnown RBP7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 ADAMTS8Q9UP79 889 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 RRP15Q9Y3B9 282 aaKnown RBP7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 PZPP20742 1482 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 RALGAPBQ86X10 1494 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 RIMBP3CA6NJZ7 1639 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 RIMBP3BA6NNM3 1639 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 RIMBP3Q9UFD9 1639 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 ATXN8OSP0DMR3 200 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 TSR2Q969E8 191 aaKnown RBP7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 NUP62CLQ9H1M0 184 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 CEP120Q8N960 986 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 NCAPGQ9BPX3 1015 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 KDM6BO15054 1643 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 PREX2Q70Z35 1606 aa7.99□□□□□ -1.13
TGFBR3-210ENST00000533089 SMIM24O75264 130 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 ZBTB17Q13105 803 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 SLMAPQ14BN4 828 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 MCTP2Q6DN12 878 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 UBAC1Q9BSL1 405 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 ANKRD18BA2A2Z9 1011 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 STIM1Q13586 685 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 CAMK4Q16566 473 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 SH2D4BQ5SQS7 431 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 DDX12PQ92771 950 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 SRCIN1Q9C0H9 1055 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 CASTP20810 708 aaKnown RBP7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 CCDC183Q5T5S1 534 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 AACSQ86V21 672 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 NLRP1Q9C000 1473 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 ACEP12821 1306 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 CBFA2T2O43439 604 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 NME9Q86XW9 330 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 RGS22Q8NE09 1264 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 FBF1Q8TES7 1133 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 ABCF2Q9UG63 623 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 LUC7L2Q9Y383 392 aaKnown RBP7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 CEP104O60308 925 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 PSMC4P43686 418 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 PIP4K2AP48426 406 aaPredicted RBP7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 CRACR2BQ8N4Y2 399 aaPredicted RBP7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 PDZRN3Q9UPQ7 1066 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 TRPM2O94759 1503 aa7.98□□□□□ -1.13
TGFBR3-210ENST00000533089 TMEM87AQ8NBN3 555 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 CFAP57Q96MR6 1250 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 ATG3Q9NT62 314 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 YTHDC2Q9H6S0 1430 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 EIF2AK4Q9P2K8 1649 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 KIF5CO60282 957 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 NEMFO60524 1076 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 IDH1O75874 414 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 LRSAM1Q6UWE0 723 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 SH3GL3Q99963 347 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 CYP46A1Q9Y6A2 500 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 TPD52L2O43399 206 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 STARD3NLO95772 234 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 KLHL40Q2TBA0 621 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 JPH2Q9BR39 696 aaPredicted RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 GEMIN8Q9NWZ8 242 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 ANKIB1Q9P2G1 1089 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 FCHSD2O94868 740 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 OAS2P29728 719 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 NEDD9Q14511 834 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 MAP3K11Q16584 847 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 ISM2Q6H9L7 571 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 JMYQ8N9B5 988 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 ABTB1Q969K4 478 aaPredicted RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 PDCP20941 246 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 LIG3P49916 1009 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 CCT4P50991 539 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 UVSSAQ2YD98 709 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 ACRBPQ8NEB7 543 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 CAPN7Q9Y6W3 813 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 WDR33Q9C0J8 1336 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 ZEB2O60315 1214 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 PTCD1O75127 700 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 RPSAP08865 295 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 DESP17661 470 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 EIF5P55010 431 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 NUTM1Q86Y26 1132 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 LRRC59Q96AG4 307 aaKnown RBP7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 SIRT1Q96EB6 747 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 CXorf56Q9H5V9 222 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 PDRG1Q9NUG6 133 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 CEP126Q9P2H0 1117 aa7.97□□□□□ -1.13
TGFBR3-210ENST00000533089 SHROOM2Q13796 1616 aa7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 ME1P48163 572 aa7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 USH1CQ9Y6N9 552 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms