RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TMC4Q7Z404 712 aa29.34■■■□□ 2.29
CAPN1-222ENST00000532285 SP8Q8IXZ3 490 aa29.34■■■□□ 2.29
CAPN1-222ENST00000532285 DNAAF4Q8WXU2 420 aa29.34■■■□□ 2.29
CAPN1-222ENST00000532285 RRAGCQ9HB90 399 aa29.34■■■□□ 2.29
CAPN1-222ENST00000532285 NEURL1BA8MQ27 555 aa29.33■■■□□ 2.29
CAPN1-222ENST00000532285 CWF19L2Q2TBE0 894 aaKnown RBP29.33■■■□□ 2.29
CAPN1-222ENST00000532285 CDHR2Q9BYE9 1310 aa29.32■■■□□ 2.28
CAPN1-222ENST00000532285 PDE8AO60658 829 aa29.32■■■□□ 2.28
CAPN1-222ENST00000532285 JARID2Q92833 1246 aaPredicted RBP29.32■■■□□ 2.28
CAPN1-222ENST00000532285 WDR90Q96KV7 1748 aa29.31■■■□□ 2.28
CAPN1-222ENST00000532285 TOMM70O94826 608 aa29.3■■■□□ 2.28
CAPN1-222ENST00000532285 SLC51AQ86UW1 340 aa29.3■■■□□ 2.28
CAPN1-222ENST00000532285 C16orf71Q8IYS4 520 aaPredicted RBP29.3■■■□□ 2.28
CAPN1-222ENST00000532285 LRRC37AA6NMS7 1700 aa29.3■■■□□ 2.28
CAPN1-222ENST00000532285 CCDC152Q4G0S7 254 aa29.29■■■□□ 2.28
CAPN1-222ENST00000532285 LINS1Q8NG48 757 aa29.29■■■□□ 2.28
CAPN1-222ENST00000532285 VEGFAP15692 232 aaPredicted RBP29.28■■■□□ 2.28
CAPN1-222ENST00000532285 JDP2Q8WYK2 163 aa29.28■■■□□ 2.28
CAPN1-222ENST00000532285 CDCA7LQ96GN5 454 aa29.28■■■□□ 2.28
CAPN1-222ENST00000532285 GCKRQ14397 625 aa29.27■■■□□ 2.28
CAPN1-222ENST00000532285 MPNDQ8N594 471 aa29.27■■■□□ 2.28
CAPN1-222ENST00000532285 SUPT20HQ8NEM7 779 aa29.27■■■□□ 2.28
CAPN1-222ENST00000532285 CELF1Q92879 486 aaKnown RBP29.27■■■□□ 2.28
CAPN1-222ENST00000532285 VPS33BQ9H267 617 aa29.27■■■□□ 2.28
CAPN1-222ENST00000532285 H7C1W4 665 aa29.26■■■□□ 2.27
CAPN1-222ENST00000532285 DPP8Q6V1X1 898 aaPredicted RBP29.26■■■□□ 2.27
CAPN1-222ENST00000532285 TRMT2AQ8IZ69 625 aaKnown RBP29.26■■■□□ 2.27
CAPN1-222ENST00000532285 RTFDC1Q9BY42 306 aaPredicted RBP29.26■■■□□ 2.27
CAPN1-222ENST00000532285 FZD9O00144 591 aa29.25■■■□□ 2.27
CAPN1-222ENST00000532285 RPS8P62241 208 aaKnown RBP29.25■■■□□ 2.27
CAPN1-222ENST00000532285 F6X3S4 739 aa29.24■■■□□ 2.27
CAPN1-222ENST00000532285 DDNO94850 711 aaPredicted RBP29.24■■■□□ 2.27
CAPN1-222ENST00000532285 UBE3BQ7Z3V4 1068 aa29.24■■■□□ 2.27
CAPN1-222ENST00000532285 LARGE2Q8N3Y3 721 aa29.24■■■□□ 2.27
CAPN1-222ENST00000532285 RBM46Q8TBY0 533 aaKnown RBP29.24■■■□□ 2.27
CAPN1-222ENST00000532285 COL4A1P02462 1669 aa29.24■■■□□ 2.27
CAPN1-222ENST00000532285 CTSWP56202 376 aa29.23■■■□□ 2.27
CAPN1-222ENST00000532285 SEC31BQ9NQW1 1179 aa29.23■■■□□ 2.27
CAPN1-222ENST00000532285 SCN4AP35499 1836 aa29.22■■■□□ 2.27
CAPN1-222ENST00000532285 COL4A5P29400 1685 aa29.21■■■□□ 2.27
CAPN1-222ENST00000532285 POTECB2RU33 542 aa29.21■■■□□ 2.27
CAPN1-222ENST00000532285 PPIP5K2O43314 1243 aa29.21■■■□□ 2.27
CAPN1-222ENST00000532285 BEND3Q5T5X7 828 aa29.21■■■□□ 2.27
CAPN1-222ENST00000532285 MRPL50Q8N5N7 158 aaKnown RBP29.21■■■□□ 2.27
CAPN1-222ENST00000532285 ZNF541Q9H0D2 1346 aa29.2■■■□□ 2.27
CAPN1-222ENST00000532285 AOC3Q16853 763 aa29.2■■■□□ 2.26
CAPN1-222ENST00000532285 TTLL11Q8NHH1 800 aa29.2■■■□□ 2.26
CAPN1-222ENST00000532285 CCDC85AQ96PX6 553 aaPredicted RBP29.2■■■□□ 2.26
CAPN1-222ENST00000532285 CASP7P55210 303 aa29.19■■■□□ 2.26
CAPN1-222ENST00000532285 EIF6P56537 245 aaKnown RBP29.19■■■□□ 2.26
CAPN1-222ENST00000532285 NIM1KQ8IY84 436 aa29.19■■■□□ 2.26
CAPN1-222ENST00000532285 L3MBTL3Q96JM7 780 aaPredicted RBP29.19■■■□□ 2.26
CAPN1-222ENST00000532285 PLA2G12BQ9BX93 195 aa29.19■■■□□ 2.26
CAPN1-222ENST00000532285 SSH1Q8WYL5 1049 aa29.18■■■□□ 2.26
CAPN1-222ENST00000532285 NSFL1CQ9UNZ2 370 aaKnown RBP29.18■■■□□ 2.26
CAPN1-222ENST00000532285 DUOX1Q9NRD9 1551 aa29.18■■■□□ 2.26
CAPN1-222ENST00000532285 RTL9Q8NET4 1388 aa29.17■■■□□ 2.26
CAPN1-222ENST00000532285 CT47B1P0C2W7 299 aaPredicted RBP29.17■■■□□ 2.26
CAPN1-222ENST00000532285 FSTL1Q12841 308 aa29.17■■■□□ 2.26
CAPN1-222ENST00000532285 ALDH1L2Q3SY69 923 aa29.17■■■□□ 2.26
CAPN1-222ENST00000532285 ANKRD18AQ8IVF6 992 aa29.17■■■□□ 2.26
CAPN1-222ENST00000532285 GPC2Q8N158 579 aa29.17■■■□□ 2.26
CAPN1-222ENST00000532285 CDC5LQ99459 802 aaKnown RBP29.17■■■□□ 2.26
CAPN1-222ENST00000532285 SPEF2Q9C093 1822 aa29.17■■■□□ 2.26
CAPN1-222ENST00000532285 LTBP1Q14766 1721 aa29.17■■■□□ 2.26
CAPN1-222ENST00000532285 IQCA1LA6NCM1 817 aa29.16■■■□□ 2.26
CAPN1-222ENST00000532285 KIAA2012Q0VF49 1180 aa29.16■■■□□ 2.26
CAPN1-222ENST00000532285 SLC4A10Q6U841 1118 aa29.16■■■□□ 2.26
CAPN1-222ENST00000532285 PTPRCP08575 1304 aa29.16■■■□□ 2.26
CAPN1-222ENST00000532285 ALDH1L1O75891 902 aa29.15■■■□□ 2.26
CAPN1-222ENST00000532285 HSPA6P17066 643 aa29.15■■■□□ 2.26
CAPN1-222ENST00000532285 GPSM2P81274 684 aa29.15■■■□□ 2.26
CAPN1-222ENST00000532285 GREM2Q9H772 168 aa29.15■■■□□ 2.26
CAPN1-222ENST00000532285 SRCIN1Q9C0H9 1055 aa29.14■■■□□ 2.26
CAPN1-222ENST00000532285 SMC1BQ8NDV3 1235 aa29.13■■■□□ 2.25
CAPN1-222ENST00000532285 PODXL2Q9NZ53 605 aa29.13■■■□□ 2.25
CAPN1-222ENST00000532285 ZNRF3Q9ULT6 936 aa29.13■■■□□ 2.25
CAPN1-222ENST00000532285 C6orf229H3BNL8 230 aa29.12■■■□□ 2.25
CAPN1-222ENST00000532285 CSF1RP07333 972 aa29.12■■■□□ 2.25
CAPN1-222ENST00000532285 WASHC4Q2M389 1173 aa29.12■■■□□ 2.25
CAPN1-222ENST00000532285 POLLQ9UGP5 575 aa29.12■■■□□ 2.25
CAPN1-222ENST00000532285 GRM8O00222 908 aa29.11■■■□□ 2.25
CAPN1-222ENST00000532285 BCL2L13Q9BXK5 485 aa29.11■■■□□ 2.25
CAPN1-222ENST00000532285 SMC4Q9NTJ3 1288 aa29.11■■■□□ 2.25
CAPN1-222ENST00000532285 C9orf78Q9NZ63 289 aaPredicted RBP29.11■■■□□ 2.25
CAPN1-222ENST00000532285 ANKIB1Q9P2G1 1089 aa29.11■■■□□ 2.25
CAPN1-222ENST00000532285 GJA3Q9Y6H8 435 aa29.11■■■□□ 2.25
CAPN1-222ENST00000532285 EYA3Q99504 573 aa29.1■■■□□ 2.25
CAPN1-222ENST00000532285 BSDC1Q9NW68 430 aaPredicted RBP29.1■■■□□ 2.25
CAPN1-222ENST00000532285 HACL1Q9UJ83 578 aa29.1■■■□□ 2.25
CAPN1-222ENST00000532285 HNRNPUQ00839 825 aaKnown RBP eCLIP29.09■■■□□ 2.25
CAPN1-222ENST00000532285 TBC1D16Q8TBP0 767 aa29.09■■■□□ 2.25
CAPN1-222ENST00000532285 TAF1DQ9H5J8 278 aaPredicted RBP29.09■■■□□ 2.25
CAPN1-222ENST00000532285 ITGA6P23229 1130 aa29.08■■■□□ 2.25
CAPN1-222ENST00000532285 GGA1Q9UJY5 639 aa29.08■■■□□ 2.25
CAPN1-222ENST00000532285 XDHP47989 1333 aa29.07■■■□□ 2.24
CAPN1-222ENST00000532285 FOXO4P98177 505 aa29.07■■■□□ 2.24
CAPN1-222ENST00000532285 CXCL9Q07325 125 aa29.07■■■□□ 2.24
CAPN1-222ENST00000532285 RIMBP2O15034 1052 aa29.06■■■□□ 2.24
CAPN1-222ENST00000532285 UFL1O94874 794 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 333.5 ms