RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 TTLL6Q8N841 843 aa20.55■□□□□ 0.88
LRFN4-203ENST00000531590 TTLL11Q8NHH1 800 aa20.55■□□□□ 0.88
LRFN4-203ENST00000531590 BCS1LQ9Y276 419 aa20.55■□□□□ 0.88
LRFN4-203ENST00000531590 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
LRFN4-203ENST00000531590 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.54■□□□□ 0.88
LRFN4-203ENST00000531590 CNKSR1Q969H4 720 aa20.54■□□□□ 0.88
LRFN4-203ENST00000531590 RBM17Q96I25 401 aaKnown RBP20.54■□□□□ 0.88
LRFN4-203ENST00000531590 PRPF40BQ6NWY9 871 aaKnown RBP20.53■□□□□ 0.88
LRFN4-203ENST00000531590 SLC51AQ86UW1 340 aa20.53■□□□□ 0.88
LRFN4-203ENST00000531590 ITPRIPQ8IWB1 547 aa20.53■□□□□ 0.88
LRFN4-203ENST00000531590 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
LRFN4-203ENST00000531590 GREM2Q9H772 168 aa20.53■□□□□ 0.88
LRFN4-203ENST00000531590 SEC31BQ9NQW1 1179 aa20.53■□□□□ 0.88
LRFN4-203ENST00000531590 CSF1RP07333 972 aa20.52■□□□□ 0.88
LRFN4-203ENST00000531590 CCDC152Q4G0S7 254 aa20.52■□□□□ 0.88
LRFN4-203ENST00000531590 DDX46Q7L014 1031 aaKnown RBP20.52■□□□□ 0.88
LRFN4-203ENST00000531590 CELF1Q92879 486 aaKnown RBP20.52■□□□□ 0.88
LRFN4-203ENST00000531590 LAMB2P55268 1798 aa20.51■□□□□ 0.87
LRFN4-203ENST00000531590 COL4A1P02462 1669 aa20.51■□□□□ 0.87
LRFN4-203ENST00000531590 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
LRFN4-203ENST00000531590 MS4A1P11836 297 aa20.51■□□□□ 0.87
LRFN4-203ENST00000531590 ALDH1B1P30837 517 aa20.51■□□□□ 0.87
LRFN4-203ENST00000531590 GPR162Q16538 588 aa20.51■□□□□ 0.87
LRFN4-203ENST00000531590 FAM161AQ3B820 660 aa20.51■□□□□ 0.87
LRFN4-203ENST00000531590 ANKRD44Q8N8A2 993 aa20.51■□□□□ 0.87
LRFN4-203ENST00000531590 BICC1Q9H694 974 aaKnown RBP20.51■□□□□ 0.87
LRFN4-203ENST00000531590 GRAPQ13588 217 aa20.5■□□□□ 0.87
LRFN4-203ENST00000531590 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
LRFN4-203ENST00000531590 RABL6Q3YEC7 729 aaPredicted RBP20.5■□□□□ 0.87
LRFN4-203ENST00000531590 LMBR1LQ6UX01 489 aa20.5■□□□□ 0.87
LRFN4-203ENST00000531590 GRAPLQ8TC17 118 aaPredicted RBP20.5■□□□□ 0.87
LRFN4-203ENST00000531590 COG6Q9Y2V7 657 aa20.5■□□□□ 0.87
LRFN4-203ENST00000531590 LRRFIP2Q9Y608 721 aaKnown RBP20.5■□□□□ 0.87
LRFN4-203ENST00000531590 DLEC1Q9Y238 1755 aa20.49■□□□□ 0.87
LRFN4-203ENST00000531590 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
LRFN4-203ENST00000531590 ZBTB7BO15156 539 aaPredicted RBP20.49■□□□□ 0.87
LRFN4-203ENST00000531590 MVPQ14764 893 aaKnown RBP20.49■□□□□ 0.87
LRFN4-203ENST00000531590 OLFM4Q6UX06 510 aa20.49■□□□□ 0.87
LRFN4-203ENST00000531590 C7orf43Q8WVR3 580 aa20.49■□□□□ 0.87
LRFN4-203ENST00000531590 ZNF219Q9P2Y4 722 aaPredicted RBP20.49■□□□□ 0.87
LRFN4-203ENST00000531590 PPEF1O14829 653 aaPredicted RBP20.48■□□□□ 0.87
LRFN4-203ENST00000531590 C21orf2O43822 256 aa20.48■□□□□ 0.87
LRFN4-203ENST00000531590 GNAI3P08754 354 aa20.48■□□□□ 0.87
LRFN4-203ENST00000531590 ITGA6P23229 1130 aa20.47■□□□□ 0.87
LRFN4-203ENST00000531590 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
LRFN4-203ENST00000531590 BRCA1P38398 1863 aaKnown RBP20.46■□□□□ 0.87
LRFN4-203ENST00000531590 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
LRFN4-203ENST00000531590 BBOX1O75936 387 aa20.45■□□□□ 0.86
LRFN4-203ENST00000531590 RPS8P62241 208 aaKnown RBP20.45■□□□□ 0.86
LRFN4-203ENST00000531590 C1orf115Q9H7X2 142 aa20.45■□□□□ 0.86
LRFN4-203ENST00000531590 GNAI2P04899 355 aa20.44■□□□□ 0.86
LRFN4-203ENST00000531590 CDC5LQ99459 802 aaKnown RBP20.44■□□□□ 0.86
LRFN4-203ENST00000531590 DDX19BQ9UMR2 479 aa20.44■□□□□ 0.86
LRFN4-203ENST00000531590 ATP6V0A2Q9Y487 856 aa20.44■□□□□ 0.86
LRFN4-203ENST00000531590 SNED1Q8TER0 1413 aa20.44■□□□□ 0.86
LRFN4-203ENST00000531590 ANKRD18BA2A2Z9 1011 aa20.43■□□□□ 0.86
LRFN4-203ENST00000531590 IFIT5Q13325 482 aaKnown RBP20.43■□□□□ 0.86
LRFN4-203ENST00000531590 ANKRD18AQ8IVF6 992 aa20.43■□□□□ 0.86
LRFN4-203ENST00000531590 ZNF594Q96JF6 807 aaPredicted RBP20.43■□□□□ 0.86
LRFN4-203ENST00000531590 SLX4Q8IY92 1834 aa20.42■□□□□ 0.86
LRFN4-203ENST00000531590 GRIN3BO60391 1043 aa20.42■□□□□ 0.86
LRFN4-203ENST00000531590 HDAC5Q9UQL6 1122 aa20.42■□□□□ 0.86
LRFN4-203ENST00000531590 NFKBIEO00221 500 aa20.41■□□□□ 0.86
LRFN4-203ENST00000531590 RFX5P48382 616 aaPredicted RBP20.41■□□□□ 0.86
LRFN4-203ENST00000531590 CCDC57Q2TAC2 916 aa20.41■□□□□ 0.86
LRFN4-203ENST00000531590 CCDC93Q567U6 631 aa20.41■□□□□ 0.86
LRFN4-203ENST00000531590 ARHGAP27Q6ZUM4 889 aa20.41■□□□□ 0.86
LRFN4-203ENST00000531590 SP8Q8IXZ3 490 aa20.41■□□□□ 0.86
LRFN4-203ENST00000531590 ZBTB40Q9NUA8 1239 aa20.41■□□□□ 0.86
LRFN4-203ENST00000531590 IGHMBP2P38935 993 aaKnown RBP20.4■□□□□ 0.86
LRFN4-203ENST00000531590 RASSF7Q02833 373 aa20.4■□□□□ 0.86
LRFN4-203ENST00000531590 SOGA3Q5TF21 947 aa20.4■□□□□ 0.86
LRFN4-203ENST00000531590 TMC4Q7Z404 712 aa20.4■□□□□ 0.86
LRFN4-203ENST00000531590 KLHDC4Q8TBB5 520 aa20.4■□□□□ 0.86
LRFN4-203ENST00000531590 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
LRFN4-203ENST00000531590 MTX1Q13505 466 aa20.39■□□□□ 0.85
LRFN4-203ENST00000531590 CC2D2BQ6DHV5 1058 aa20.39■□□□□ 0.85
LRFN4-203ENST00000531590 CRBNQ96SW2 442 aa20.39■□□□□ 0.85
LRFN4-203ENST00000531590 BSDC1Q9NW68 430 aaPredicted RBP20.39■□□□□ 0.85
LRFN4-203ENST00000531590 PRELPP51888 382 aa20.38■□□□□ 0.85
LRFN4-203ENST00000531590 TAF7LQ5H9L4 462 aa20.38■□□□□ 0.85
LRFN4-203ENST00000531590 PNMA6EA0A0J9YXQ4 647 aa20.37■□□□□ 0.85
LRFN4-203ENST00000531590 GPSM2P81274 684 aa20.37■□□□□ 0.85
LRFN4-203ENST00000531590 PTPN12Q05209 780 aaKnown RBP20.37■□□□□ 0.85
LRFN4-203ENST00000531590 RTKN2Q8IZC4 609 aa20.37■□□□□ 0.85
LRFN4-203ENST00000531590 MPHOSPH8Q99549 860 aa20.37■□□□□ 0.85
LRFN4-203ENST00000531590 PUS3Q9BZE2 481 aaKnown RBP20.37■□□□□ 0.85
LRFN4-203ENST00000531590 MINPP1Q9UNW1 487 aa20.37■□□□□ 0.85
LRFN4-203ENST00000531590 SRGAP3O43295 1099 aa20.36■□□□□ 0.85
LRFN4-203ENST00000531590 CEP85Q6P2H3 762 aa20.36■□□□□ 0.85
LRFN4-203ENST00000531590 LDHAL6AQ6ZMR3 332 aa20.36■□□□□ 0.85
LRFN4-203ENST00000531590 TAOK3Q9H2K8 898 aa20.36■□□□□ 0.85
LRFN4-203ENST00000531590 TAF1P21675 1872 aa20.35■□□□□ 0.85
LRFN4-203ENST00000531590 FKBP4Q02790 459 aaKnown RBP eCLIP20.35■□□□□ 0.85
LRFN4-203ENST00000531590 MPNDQ8N594 471 aa20.35■□□□□ 0.85
LRFN4-203ENST00000531590 TMX4Q9H1E5 349 aaPredicted RBP20.35■□□□□ 0.85
LRFN4-203ENST00000531590 NSFL1CQ9UNZ2 370 aaKnown RBP20.35■□□□□ 0.85
LRFN4-203ENST00000531590 PA2G4Q9UQ80 394 aaKnown RBP20.35■□□□□ 0.85
LRFN4-203ENST00000531590 ARFGEF1Q9Y6D6 1849 aa20.34■□□□□ 0.85
LRFN4-203ENST00000531590 ATP8B2P98198 1209 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms