RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
LRRK1-207ENST00000531270 NSD3Q9BZ95 1437 aa16.7■□□□□ 0.26
LRRK1-207ENST00000531270 MNAT1P51948 309 aa16.7■□□□□ 0.26
LRRK1-207ENST00000531270 CRNKL1Q9BZJ0 848 aaKnown RBP16.7■□□□□ 0.26
LRRK1-207ENST00000531270 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
LRRK1-207ENST00000531270 ERBINQ96RT1 1412 aa16.7■□□□□ 0.26
LRRK1-207ENST00000531270 SLU7O95391 586 aaKnown RBP16.7■□□□□ 0.26
LRRK1-207ENST00000531270 RBM26Q5T8P6 1007 aaKnown RBP16.7■□□□□ 0.26
LRRK1-207ENST00000531270 NCOA7Q8NI08 942 aa16.7■□□□□ 0.26
LRRK1-207ENST00000531270 EVI5LQ96CN4 794 aa16.7■□□□□ 0.26
LRRK1-207ENST00000531270 RASAL2Q9UJF2 1139 aa16.7■□□□□ 0.26
LRRK1-207ENST00000531270 PROCA1Q8NCQ7 364 aaPredicted RBP16.69■□□□□ 0.26
LRRK1-207ENST00000531270 SMC6Q96SB8 1091 aa16.69■□□□□ 0.26
LRRK1-207ENST00000531270 NSRP1Q9H0G5 558 aaKnown RBP16.69■□□□□ 0.26
LRRK1-207ENST00000531270 SMC1BQ8NDV3 1235 aa16.69■□□□□ 0.26
LRRK1-207ENST00000531270 KANK3Q6NY19 840 aa16.69■□□□□ 0.26
LRRK1-207ENST00000531270 DDX12PQ92771 950 aa16.69■□□□□ 0.26
LRRK1-207ENST00000531270 ATRIPQ8WXE1 791 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 NEK1Q96PY6 1258 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 IMPG2Q9BZV3 1241 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 NEMFO60524 1076 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 SMARCC2Q8TAQ2 1214 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 SELENOOQ9BVL4 669 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 LRRC2Q9BYS8 371 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 FAM13AO94988 1023 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 SNX16P57768 344 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 SP4Q02446 784 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 AMOTQ4VCS5 1084 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 ZNF165P49910 485 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 WTAPQ15007 396 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 NBPF6Q5VWK0 638 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 MSL1Q68DK7 614 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 USP37Q86T82 979 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
LRRK1-207ENST00000531270 NBPF4Q96M43 638 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
LRRK1-207ENST00000531270 IFIT1BQ5T764 474 aaKnown RBP16.68■□□□□ 0.26
LRRK1-207ENST00000531270 TTC12Q9H892 705 aaPredicted RBP16.68■□□□□ 0.26
LRRK1-207ENST00000531270 RMND1Q9NWS8 449 aa16.68■□□□□ 0.26
LRRK1-207ENST00000531270 CUX1P39880 1505 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 TNPO1Q92973 898 aaKnown RBP16.67■□□□□ 0.26
LRRK1-207ENST00000531270 PYM1Q9BRP8 204 aaKnown RBP16.67■□□□□ 0.26
LRRK1-207ENST00000531270 VEZTQ9HBM0 779 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 UBASH3AP57075 661 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 PPP1R42Q7Z4L9 355 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 NME9Q86XW9 330 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 EHBP1Q8NDI1 1231 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 ATAD2Q6PL18 1390 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 FOXO3O43524 673 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 GSTO1P78417 241 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 ZHX1Q9UKY1 873 aaPredicted RBP16.67■□□□□ 0.26
LRRK1-207ENST00000531270 PLEKHH1Q9ULM0 1364 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 SYKP43405 635 aa16.67■□□□□ 0.26
LRRK1-207ENST00000531270 KLF18A0A0U1RQI7 1052 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 GOLGA6L9A6NEM1 432 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 UBE3BQ7Z3V4 1068 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 SIRT1Q96EB6 747 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 RSPH14Q9UHP6 348 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 CYP7A1P22680 504 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 ASIC1P78348 528 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 SLFN5Q08AF3 891 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 NCBP1Q09161 790 aaKnown RBP16.66■□□□□ 0.26
LRRK1-207ENST00000531270 CCDC77Q9BR77 488 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 TXNDC16Q9P2K2 825 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 BIN2Q9UBW5 565 aaPredicted RBP16.66■□□□□ 0.26
LRRK1-207ENST00000531270 SLC4A4Q9Y6R1 1079 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 FAM169AQ9Y6X4 670 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 RASA3Q14644 834 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 NECAB1Q8N987 351 aa16.66■□□□□ 0.26
LRRK1-207ENST00000531270 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.66■□□□□ 0.26
LRRK1-207ENST00000531270 NBPF7P0C2Y1 421 aaPredicted RBP16.65■□□□□ 0.26
LRRK1-207ENST00000531270 GIMAP6Q6P9H5 292 aa16.65■□□□□ 0.26
LRRK1-207ENST00000531270 CAPZA3Q96KX2 299 aa16.65■□□□□ 0.26
LRRK1-207ENST00000531270 PFDN4Q9NQP4 134 aa16.65■□□□□ 0.26
LRRK1-207ENST00000531270 HDAC9Q9UKV0 1011 aa16.65■□□□□ 0.26
LRRK1-207ENST00000531270 GAPVD1Q14C86 1478 aa16.65■□□□□ 0.26
LRRK1-207ENST00000531270 CYLC1P35663 651 aaPredicted RBP16.65■□□□□ 0.26
LRRK1-207ENST00000531270 C16orf71Q8IYS4 520 aaPredicted RBP16.65■□□□□ 0.26
LRRK1-207ENST00000531270 RPUSD2Q8IZ73 545 aaKnown RBP16.65■□□□□ 0.26
LRRK1-207ENST00000531270 ZNF830Q96NB3 372 aaPredicted RBP16.65■□□□□ 0.26
LRRK1-207ENST00000531270 DBF4Q9UBU7 674 aaPredicted RBP16.65■□□□□ 0.26
LRRK1-207ENST00000531270 NAPAP54920 295 aa16.65■□□□□ 0.26
LRRK1-207ENST00000531270 CCDC25Q86WR0 208 aa16.65■□□□□ 0.26
LRRK1-207ENST00000531270 ECHDC1Q9NTX5 307 aa16.65■□□□□ 0.26
LRRK1-207ENST00000531270 CCDC61Q9Y6R9 512 aa16.65■□□□□ 0.26
LRRK1-207ENST00000531270 ATP2A1O14983 1001 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 MCM6Q14566 821 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 ACSBG1Q96GR2 724 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 SLC52A1Q9NWF4 448 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 NOL3O60936 208 aaKnown RBP16.64■□□□□ 0.25
LRRK1-207ENST00000531270 CTAGE15A4D2H0 777 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 CTAGE8P0CG41 777 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 CFAP157Q5JU67 520 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 CTAGE6Q86UF2 777 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 CTAGE4Q8IX94 777 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.64■□□□□ 0.25
LRRK1-207ENST00000531270 EMILIN1Q9Y6C2 1016 aa16.64■□□□□ 0.25
LRRK1-207ENST00000531270 HAUS7Q99871 368 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms