RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 GCKRQ14397 625 aa23.86■■□□□ 1.41
GMDS-208ENST00000530927 BEND3Q5T5X7 828 aa23.86■■□□□ 1.41
GMDS-208ENST00000530927 COL4A5P29400 1685 aa23.86■■□□□ 1.41
GMDS-208ENST00000530927 RTKN2Q8IZC4 609 aa23.85■■□□□ 1.41
GMDS-208ENST00000530927 LINS1Q8NG48 757 aa23.85■■□□□ 1.41
GMDS-208ENST00000530927 NMRK2Q9NPI5 230 aa23.85■■□□□ 1.41
GMDS-208ENST00000530927 ATP6V0A2Q9Y487 856 aa23.85■■□□□ 1.41
GMDS-208ENST00000530927 H7C1W4 665 aa23.84■■□□□ 1.41
GMDS-208ENST00000530927 PDE8AO60658 829 aa23.84■■□□□ 1.41
GMDS-208ENST00000530927 CASP7P55210 303 aa23.84■■□□□ 1.41
GMDS-208ENST00000530927 SLC4A10Q6U841 1118 aa23.84■■□□□ 1.41
GMDS-208ENST00000530927 CDHR2Q9BYE9 1310 aa23.84■■□□□ 1.41
GMDS-208ENST00000530927 SMC4Q9NTJ3 1288 aa23.83■■□□□ 1.4
GMDS-208ENST00000530927 BBOX1O75936 387 aa23.82■■□□□ 1.4
GMDS-208ENST00000530927 IARSP41252 1262 aaKnown RBP23.81■■□□□ 1.4
GMDS-208ENST00000530927 CTSWP56202 376 aa23.81■■□□□ 1.4
GMDS-208ENST00000530927 SP8Q8IXZ3 490 aa23.81■■□□□ 1.4
GMDS-208ENST00000530927 PSMD1Q99460 953 aa23.81■■□□□ 1.4
GMDS-208ENST00000530927 LRRC37AA6NMS7 1700 aa23.81■■□□□ 1.4
GMDS-208ENST00000530927 DUOX1Q9NRD9 1551 aa23.8■■□□□ 1.4
GMDS-208ENST00000530927 KIF3CO14782 793 aa23.8■■□□□ 1.4
GMDS-208ENST00000530927 CC2D2BQ6DHV5 1058 aa23.8■■□□□ 1.4
GMDS-208ENST00000530927 GREM2Q9H772 168 aa23.8■■□□□ 1.4
GMDS-208ENST00000530927 MYH3P11055 1940 aa23.8■■□□□ 1.4
GMDS-208ENST00000530927 ALDH1L2Q3SY69 923 aa23.79■■□□□ 1.4
GMDS-208ENST00000530927 CCDC152Q4G0S7 254 aa23.79■■□□□ 1.4
GMDS-208ENST00000530927 TTLL11Q8NHH1 800 aa23.79■■□□□ 1.4
GMDS-208ENST00000530927 SPEF2Q9C093 1822 aa23.78■■□□□ 1.4
GMDS-208ENST00000530927 GLTPD2A6NH11 291 aa23.77■■□□□ 1.4
GMDS-208ENST00000530927 RPS8P62241 208 aaKnown RBP23.77■■□□□ 1.4
GMDS-208ENST00000530927 RRAGCQ9HB90 399 aa23.77■■□□□ 1.4
GMDS-208ENST00000530927 ZNF541Q9H0D2 1346 aa23.77■■□□□ 1.4
GMDS-208ENST00000530927 ZC3H4Q9UPT8 1303 aaKnown RBP23.77■■□□□ 1.4
GMDS-208ENST00000530927 RARSP54136 660 aaKnown RBP23.76■■□□□ 1.39
GMDS-208ENST00000530927 DPP8Q6V1X1 898 aaPredicted RBP23.76■■□□□ 1.39
GMDS-208ENST00000530927 SRCIN1Q9C0H9 1055 aa23.76■■□□□ 1.39
GMDS-208ENST00000530927 PTPRCP08575 1304 aa23.76■■□□□ 1.39
GMDS-208ENST00000530927 DDNO94850 711 aaPredicted RBP23.76■■□□□ 1.39
GMDS-208ENST00000530927 HSP90B1P14625 803 aaKnown RBP23.76■■□□□ 1.39
GMDS-208ENST00000530927 GPSM2P81274 684 aa23.76■■□□□ 1.39
GMDS-208ENST00000530927 AOC3Q16853 763 aa23.76■■□□□ 1.39
GMDS-208ENST00000530927 EPHA10Q5JZY3 1008 aa23.76■■□□□ 1.39
GMDS-208ENST00000530927 MPNDQ8N594 471 aa23.76■■□□□ 1.39
GMDS-208ENST00000530927 NOB1Q9ULX3 412 aaKnown RBP23.76■■□□□ 1.39
GMDS-208ENST00000530927 KDM2BQ8NHM5 1336 aa23.75■■□□□ 1.39
GMDS-208ENST00000530927 LTBP1Q14766 1721 aa23.75■■□□□ 1.39
GMDS-208ENST00000530927 CT47B1P0C2W7 299 aaPredicted RBP23.75■■□□□ 1.39
GMDS-208ENST00000530927 FAM161AQ3B820 660 aa23.75■■□□□ 1.39
GMDS-208ENST00000530927 GPR101Q96P66 508 aaPredicted RBP23.75■■□□□ 1.39
GMDS-208ENST00000530927 PLA2G12BQ9BX93 195 aa23.75■■□□□ 1.39
GMDS-208ENST00000530927 TMX4Q9H1E5 349 aaPredicted RBP23.75■■□□□ 1.39
GMDS-208ENST00000530927 ZBED9Q6R2W3 1325 aa23.75■■□□□ 1.39
GMDS-208ENST00000530927 GRM8O00222 908 aa23.74■■□□□ 1.39
GMDS-208ENST00000530927 PPIP5K2O43314 1243 aa23.74■■□□□ 1.39
GMDS-208ENST00000530927 FOXO4P98177 505 aa23.74■■□□□ 1.39
GMDS-208ENST00000530927 RTFDC1Q9BY42 306 aaPredicted RBP23.74■■□□□ 1.39
GMDS-208ENST00000530927 NSFL1CQ9UNZ2 370 aaKnown RBP23.74■■□□□ 1.39
GMDS-208ENST00000530927 ALDH1L1O75891 902 aa23.73■■□□□ 1.39
GMDS-208ENST00000530927 LARGE2Q8N3Y3 721 aa23.73■■□□□ 1.39
GMDS-208ENST00000530927 C9orf78Q9NZ63 289 aaPredicted RBP23.73■■□□□ 1.39
GMDS-208ENST00000530927 POTECB2RU33 542 aa23.72■■□□□ 1.39
GMDS-208ENST00000530927 BCAR3O75815 825 aa23.72■■□□□ 1.39
GMDS-208ENST00000530927 NBPF7P0C2Y1 421 aaPredicted RBP23.72■■□□□ 1.39
GMDS-208ENST00000530927 C1QTNF8P60827 252 aa23.72■■□□□ 1.39
GMDS-208ENST00000530927 TMC4Q7Z404 712 aa23.72■■□□□ 1.39
GMDS-208ENST00000530927 FZD9O00144 591 aa23.71■■□□□ 1.39
GMDS-208ENST00000530927 CSF1RP07333 972 aa23.71■■□□□ 1.39
GMDS-208ENST00000530927 GRIPAP1Q4V328 841 aa23.71■■□□□ 1.39
GMDS-208ENST00000530927 ANKRD18AQ8IVF6 992 aa23.71■■□□□ 1.39
GMDS-208ENST00000530927 SUCLG2Q96I99 432 aa23.71■■□□□ 1.39
GMDS-208ENST00000530927 POLLQ9UGP5 575 aa23.71■■□□□ 1.39
GMDS-208ENST00000530927 TNNQ9UQP3 1299 aa23.71■■□□□ 1.39
GMDS-208ENST00000530927 RTL9Q8NET4 1388 aa23.7■■□□□ 1.39
GMDS-208ENST00000530927 WDR90Q96KV7 1748 aa23.7■■□□□ 1.38
GMDS-208ENST00000530927 WTIPA6NIX2 430 aaPredicted RBP23.7■■□□□ 1.38
GMDS-208ENST00000530927 ITGA6P23229 1130 aa23.7■■□□□ 1.38
GMDS-208ENST00000530927 KAZALD1Q96I82 304 aa23.7■■□□□ 1.38
GMDS-208ENST00000530927 DPY19L2Q6NUT2 758 aa23.69■■□□□ 1.38
GMDS-208ENST00000530927 JDP2Q8WYK2 163 aa23.69■■□□□ 1.38
GMDS-208ENST00000530927 CHMP3Q9Y3E7 222 aa23.69■■□□□ 1.38
GMDS-208ENST00000530927 RIMBP2O15034 1052 aa23.68■■□□□ 1.38
GMDS-208ENST00000530927 C6orf229H3BNL8 230 aa23.67■■□□□ 1.38
GMDS-208ENST00000530927 BRPF1P55201 1214 aaPredicted RBP23.67■■□□□ 1.38
GMDS-208ENST00000530927 LMBR1LQ6UX01 489 aa23.67■■□□□ 1.38
GMDS-208ENST00000530927 SUPT20HQ8NEM7 779 aa23.67■■□□□ 1.38
GMDS-208ENST00000530927 TBC1D16Q8TBP0 767 aa23.67■■□□□ 1.38
GMDS-208ENST00000530927 CDC5LQ99459 802 aaKnown RBP23.67■■□□□ 1.38
GMDS-208ENST00000530927 KIAA2012Q0VF49 1180 aa23.67■■□□□ 1.38
GMDS-208ENST00000530927 NIM1KQ8IY84 436 aa23.67■■□□□ 1.38
GMDS-208ENST00000530927 UTYO14607 1347 aa23.66■■□□□ 1.38
GMDS-208ENST00000530927 USP44Q9H0E7 712 aa23.66■■□□□ 1.38
GMDS-208ENST00000530927 ANKIB1Q9P2G1 1089 aa23.66■■□□□ 1.38
GMDS-208ENST00000530927 MINPP1Q9UNW1 487 aa23.66■■□□□ 1.38
GMDS-208ENST00000530927 GJA3Q9Y6H8 435 aa23.66■■□□□ 1.38
GMDS-208ENST00000530927 UFL1O94874 794 aa23.65■■□□□ 1.38
GMDS-208ENST00000530927 ZNF594Q96JF6 807 aaPredicted RBP23.65■■□□□ 1.38
GMDS-208ENST00000530927 BSDC1Q9NW68 430 aaPredicted RBP23.65■■□□□ 1.38
GMDS-208ENST00000530927 YDJCA8MPS7 323 aa23.64■■□□□ 1.37
GMDS-208ENST00000530927 VEGFAP15692 232 aaPredicted RBP23.64■■□□□ 1.37
GMDS-208ENST00000530927 WASHC4Q2M389 1173 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms