RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 SLX4Q8IY92 1834 aa26.88■■□□□ 1.89
CAPN1-220ENST00000530567 FOXO4P98177 505 aa26.88■■□□□ 1.89
CAPN1-220ENST00000530567 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.88■■□□□ 1.89
CAPN1-220ENST00000530567 RPGRQ92834 1020 aaKnown RBP26.88■■□□□ 1.89
CAPN1-220ENST00000530567 TTLL11Q8NHH1 800 aa26.87■■□□□ 1.89
CAPN1-220ENST00000530567 TAF1P21675 1872 aa26.87■■□□□ 1.89
CAPN1-220ENST00000530567 ARFGEF1Q9Y6D6 1849 aa26.86■■□□□ 1.89
CAPN1-220ENST00000530567 MS4A1P11836 297 aa26.86■■□□□ 1.89
CAPN1-220ENST00000530567 CSF1RP07333 972 aa26.85■■□□□ 1.89
CAPN1-220ENST00000530567 YBX3P16989 372 aaKnown RBP eCLIP26.85■■□□□ 1.895e-9■■□□□ 13.8
CAPN1-220ENST00000530567 PDE3AQ14432 1141 aa26.85■■□□□ 1.89
CAPN1-220ENST00000530567 TTLL6Q8N841 843 aa26.85■■□□□ 1.89
CAPN1-220ENST00000530567 CNKSR1Q969H4 720 aa26.85■■□□□ 1.89
CAPN1-220ENST00000530567 CRAMP1Q96RY5 1269 aa26.85■■□□□ 1.89
CAPN1-220ENST00000530567 DALRD3Q5D0E6 543 aaKnown RBP26.84■■□□□ 1.89
CAPN1-220ENST00000530567 PRPF40BQ6NWY9 871 aaKnown RBP26.84■■□□□ 1.89
CAPN1-220ENST00000530567 ITPRIPQ8IWB1 547 aa26.84■■□□□ 1.89
CAPN1-220ENST00000530567 RBM17Q96I25 401 aaKnown RBP26.84■■□□□ 1.89
CAPN1-220ENST00000530567 CCDC85AQ96PX6 553 aaPredicted RBP26.84■■□□□ 1.89
CAPN1-220ENST00000530567 RTL9Q8NET4 1388 aa26.84■■□□□ 1.89
CAPN1-220ENST00000530567 CCDC152Q4G0S7 254 aa26.83■■□□□ 1.89
CAPN1-220ENST00000530567 GREM2Q9H772 168 aa26.83■■□□□ 1.89
CAPN1-220ENST00000530567 BCS1LQ9Y276 419 aa26.83■■□□□ 1.89
CAPN1-220ENST00000530567 UBTFL1P0CB47 393 aaPredicted RBP26.82■■□□□ 1.88
CAPN1-220ENST00000530567 ANKRD44Q8N8A2 993 aa26.82■■□□□ 1.88
CAPN1-220ENST00000530567 BICC1Q9H694 974 aaKnown RBP26.82■■□□□ 1.88
CAPN1-220ENST00000530567 ALDH1B1P30837 517 aa26.82■■□□□ 1.88
CAPN1-220ENST00000530567 MVPQ14764 893 aaKnown RBP26.82■■□□□ 1.88
CAPN1-220ENST00000530567 FAM161AQ3B820 660 aa26.82■■□□□ 1.88
CAPN1-220ENST00000530567 RABL6Q3YEC7 729 aaPredicted RBP26.82■■□□□ 1.88
CAPN1-220ENST00000530567 DDX46Q7L014 1031 aaKnown RBP26.82■■□□□ 1.88
CAPN1-220ENST00000530567 SEC31BQ9NQW1 1179 aa26.82■■□□□ 1.88
CAPN1-220ENST00000530567 COG6Q9Y2V7 657 aa26.82■■□□□ 1.88
CAPN1-220ENST00000530567 GNAI3P08754 354 aa26.81■■□□□ 1.88
CAPN1-220ENST00000530567 GRAPQ13588 217 aa26.81■■□□□ 1.88
CAPN1-220ENST00000530567 LMBR1LQ6UX01 489 aa26.81■■□□□ 1.88
CAPN1-220ENST00000530567 SLC51AQ86UW1 340 aa26.81■■□□□ 1.88
CAPN1-220ENST00000530567 GRAPLQ8TC17 118 aaPredicted RBP26.81■■□□□ 1.88
CAPN1-220ENST00000530567 C7orf43Q8WVR3 580 aa26.81■■□□□ 1.88
CAPN1-220ENST00000530567 ZBTB7BO15156 539 aaPredicted RBP26.8■■□□□ 1.88
CAPN1-220ENST00000530567 CELF1Q92879 486 aaKnown RBP26.8■■□□□ 1.88
CAPN1-220ENST00000530567 LRRFIP2Q9Y608 721 aaKnown RBP26.8■■□□□ 1.88
CAPN1-220ENST00000530567 PELP1Q8IZL8 1130 aaKnown RBP26.79■■□□□ 1.88
CAPN1-220ENST00000530567 LRRC37AA6NMS7 1700 aa26.76■■□□□ 1.88
CAPN1-220ENST00000530567 SNED1Q8TER0 1413 aa26.76■■□□□ 1.87
CAPN1-220ENST00000530567 ITGA6P23229 1130 aa26.76■■□□□ 1.87
CAPN1-220ENST00000530567 GPR162Q16538 588 aa26.76■■□□□ 1.87
CAPN1-220ENST00000530567 SUPT16HQ9Y5B9 1047 aaKnown RBP26.76■■□□□ 1.87
CAPN1-220ENST00000530567 PPEF1O14829 653 aaPredicted RBP26.75■■□□□ 1.87
CAPN1-220ENST00000530567 C21orf2O43822 256 aa26.75■■□□□ 1.87
CAPN1-220ENST00000530567 OLFM4Q6UX06 510 aa26.75■■□□□ 1.87
CAPN1-220ENST00000530567 SPEF2Q9C093 1822 aa26.75■■□□□ 1.87
CAPN1-220ENST00000530567 BBOX1O75936 387 aa26.74■■□□□ 1.87
CAPN1-220ENST00000530567 ZNF219Q9P2Y4 722 aaPredicted RBP26.74■■□□□ 1.87
CAPN1-220ENST00000530567 DDX19BQ9UMR2 479 aa26.74■■□□□ 1.87
CAPN1-220ENST00000530567 CHMP3Q9Y3E7 222 aa26.74■■□□□ 1.87
CAPN1-220ENST00000530567 GNAI2P04899 355 aa26.73■■□□□ 1.87
CAPN1-220ENST00000530567 RPS8P62241 208 aaKnown RBP26.73■■□□□ 1.87
CAPN1-220ENST00000530567 HDAC5Q9UQL6 1122 aa26.73■■□□□ 1.87
CAPN1-220ENST00000530567 UTRNP46939 3433 aa26.73■■□□□ 1.87
CAPN1-220ENST00000530567 CDC5LQ99459 802 aaKnown RBP26.73■■□□□ 1.87
CAPN1-220ENST00000530567 ATP6V0A2Q9Y487 856 aa26.73■■□□□ 1.87
CAPN1-220ENST00000530567 IFIT5Q13325 482 aaKnown RBP26.72■■□□□ 1.87
CAPN1-220ENST00000530567 C1orf115Q9H7X2 142 aa26.72■■□□□ 1.87
CAPN1-220ENST00000530567 FER1L6Q2WGJ9 1857 aa26.72■■□□□ 1.87
CAPN1-220ENST00000530567 ANKRD18BA2A2Z9 1011 aa26.71■■□□□ 1.87
CAPN1-220ENST00000530567 ANKRD18AQ8IVF6 992 aa26.71■■□□□ 1.87
CAPN1-220ENST00000530567 ZBTB40Q9NUA8 1239 aa26.71■■□□□ 1.87
CAPN1-220ENST00000530567 MTX1Q13505 466 aa26.7■■□□□ 1.86
CAPN1-220ENST00000530567 TMC4Q7Z404 712 aa26.7■■□□□ 1.86
CAPN1-220ENST00000530567 LTBP1Q14766 1721 aa26.69■■□□□ 1.86
CAPN1-220ENST00000530567 RFX5P48382 616 aaPredicted RBP26.69■■□□□ 1.86
CAPN1-220ENST00000530567 CCDC57Q2TAC2 916 aa26.69■■□□□ 1.86
CAPN1-220ENST00000530567 SP8Q8IXZ3 490 aa26.69■■□□□ 1.86
CAPN1-220ENST00000530567 GRIN3BO60391 1043 aa26.68■■□□□ 1.86
CAPN1-220ENST00000530567 CCDC93Q567U6 631 aa26.68■■□□□ 1.86
CAPN1-220ENST00000530567 SOGA3Q5TF21 947 aa26.68■■□□□ 1.86
CAPN1-220ENST00000530567 ZNF594Q96JF6 807 aaPredicted RBP26.68■■□□□ 1.86
CAPN1-220ENST00000530567 NFKBIEO00221 500 aa26.67■■□□□ 1.86
CAPN1-220ENST00000530567 CC2D2BQ6DHV5 1058 aa26.67■■□□□ 1.86
CAPN1-220ENST00000530567 CRBNQ96SW2 442 aa26.67■■□□□ 1.86
CAPN1-220ENST00000530567 BSDC1Q9NW68 430 aaPredicted RBP26.67■■□□□ 1.86
CAPN1-220ENST00000530567 DUOX1Q9NRD9 1551 aa26.66■■□□□ 1.86
CAPN1-220ENST00000530567 IGHMBP2P38935 993 aaKnown RBP26.65■■□□□ 1.86
CAPN1-220ENST00000530567 PNMA6EA0A0J9YXQ4 647 aa26.65■■□□□ 1.86
CAPN1-220ENST00000530567 ARHGAP27Q6ZUM4 889 aa26.65■■□□□ 1.86
CAPN1-220ENST00000530567 KLHDC4Q8TBB5 520 aa26.65■■□□□ 1.86
CAPN1-220ENST00000530567 A0A1B0GUL6 1792 aa26.64■■□□□ 1.86
CAPN1-220ENST00000530567 RASSF7Q02833 373 aa26.64■■□□□ 1.85
CAPN1-220ENST00000530567 CHMP4BQ9H444 224 aaKnown RBP26.64■■□□□ 1.85
CAPN1-220ENST00000530567 LTBP3Q9NS15 1303 aa26.63■■□□□ 1.85
CAPN1-220ENST00000530567 DCAF8L1A6NGE4 600 aa26.63■■□□□ 1.85
CAPN1-220ENST00000530567 SRGAP3O43295 1099 aa26.63■■□□□ 1.85
CAPN1-220ENST00000530567 PRELPP51888 382 aa26.63■■□□□ 1.85
CAPN1-220ENST00000530567 PTPN12Q05209 780 aaKnown RBP26.63■■□□□ 1.85
CAPN1-220ENST00000530567 TAF7LQ5H9L4 462 aa26.63■■□□□ 1.85
CAPN1-220ENST00000530567 CEP85Q6P2H3 762 aa26.63■■□□□ 1.85
CAPN1-220ENST00000530567 RTKN2Q8IZC4 609 aa26.63■■□□□ 1.85
CAPN1-220ENST00000530567 MPHOSPH8Q99549 860 aa26.63■■□□□ 1.85
CAPN1-220ENST00000530567 MINPP1Q9UNW1 487 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms