RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	TMEM87A	Q8NBN3	555 aa		12.81	□□□□□ -0.36
PUF60-213	ENST00000528999	SYAP1	Q96A49	352 aa	Predicted RBP	12.81	□□□□□ -0.36
PUF60-213	ENST00000528999	CHMP4C	Q96CF2	233 aa		12.81	□□□□□ -0.36
PUF60-213	ENST00000528999	TLR7	Q9NYK1	1049 aa	Known RBP	12.81	□□□□□ -0.36
PUF60-213	ENST00000528999	SMC3	Q9UQE7	1217 aa		12.81	□□□□□ -0.36
PUF60-213	ENST00000528999	CDHR2	Q9BYE9	1310 aa		12.81	□□□□□ -0.36
PUF60-213	ENST00000528999	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.81	□□□□□ -0.36
PUF60-213	ENST00000528999	LRP6	O75581	1613 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	DISP2	A7MBM2	1401 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	EXOC5	O00471	708 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	CSF1R	P07333	972 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	HMGB1	P09429	215 aa	Known RBP	12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	KLHDC4	Q8TBB5	520 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	PIGB	Q92521	554 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	FAM227B	Q96M60	508 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	BTG4	Q9NY30	223 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	THRAP3	Q9Y2W1	955 aa	Known RBP	12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	SH3TC1	Q8TE82	1336 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	PALLD	Q8WX93	1383 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	ABCC12	Q96J65	1359 aa		12.8	□□□□□ -0.36
PUF60-213	ENST00000528999	NUP188	Q5SRE5	1749 aa		12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	COL14A1	Q05707	1796 aa	Known RBP	12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	AFDN	P55196	1824 aa	Known RBP	12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	ERVV-1	B6SEH8	477 aa		12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	ZSCAN22	P10073	491 aa	Predicted RBP	12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	PDC	P20941	246 aa		12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	PIP4K2A	P48426	406 aa	Predicted RBP	12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	CCDC57	Q2TAC2	916 aa		12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	BLOC1S2	Q6QNY1	142 aa		12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	AK7	Q96M32	723 aa		12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	CEP126	Q9P2H0	1117 aa		12.79	□□□□□ -0.36
PUF60-213	ENST00000528999	SHANK3	Q9BYB0	1731 aa		12.79	□□□□□ -0.36
PUF60-213	ENST00000528999		A0A0D9SFI3	127 aa		12.78	□□□□□ -0.36
PUF60-213	ENST00000528999	STX6	O43752	255 aa		12.78	□□□□□ -0.36
PUF60-213	ENST00000528999	RPS6KB1	P23443	525 aa		12.78	□□□□□ -0.36
PUF60-213	ENST00000528999	ANP32B	Q92688	251 aa	Known RBP	12.78	□□□□□ -0.36
PUF60-213	ENST00000528999	DBNDD2	Q9BQY9	259 aa		12.78	□□□□□ -0.36
PUF60-213	ENST00000528999	MAP3K15	Q6ZN16	1313 aa		12.78	□□□□□ -0.36
PUF60-213	ENST00000528999	BCL9	O00512	1426 aa		12.78	□□□□□ -0.36
PUF60-213	ENST00000528999	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.77	□□□□□ -0.36
PUF60-213	ENST00000528999	PHF14	O94880	888 aa		12.77	□□□□□ -0.37
PUF60-213	ENST00000528999	LETM1	O95202	739 aa	Predicted RBP	12.77	□□□□□ -0.37
PUF60-213	ENST00000528999	ZFY	P08048	801 aa	Predicted RBP	12.77	□□□□□ -0.37
PUF60-213	ENST00000528999	ZSCAN23	Q3MJ62	389 aa		12.77	□□□□□ -0.37
PUF60-213	ENST00000528999	DSCC1	Q9BVC3	393 aa		12.77	□□□□□ -0.37
PUF60-213	ENST00000528999	ZBTB3	Q9H5J0	574 aa		12.77	□□□□□ -0.37
PUF60-213	ENST00000528999	PAG1	Q9NWQ8	432 aa		12.77	□□□□□ -0.37
PUF60-213	ENST00000528999	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.77	□□□□□ -0.37
PUF60-213	ENST00000528999	CYP19A1	P11511	503 aa	Predicted RBP	12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	HSP90B1	P14625	803 aa	Known RBP	12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	SYT1	P21579	422 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	IL6ST	P40189	918 aa	Predicted RBP	12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	ADCK5	Q3MIX3	580 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	CCDC158	Q5M9N0	1113 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	GAS2L3	Q86XJ1	694 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	DNAJC10	Q8IXB1	793 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	GPT2	Q8TD30	523 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	JARID2	Q92833	1246 aa	Predicted RBP	12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	PPP1R9B	Q96SB3	815 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	ASAP1	Q9ULH1	1129 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	CHMP3	Q9Y3E7	222 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	SPEF2	Q9C093	1822 aa		12.76	□□□□□ -0.37
PUF60-213	ENST00000528999	CCDC173	Q0VFZ6	552 aa		12.75	□□□□□ -0.37
PUF60-213	ENST00000528999	IFIT5	Q13325	482 aa	Known RBP	12.75	□□□□□ -0.37
PUF60-213	ENST00000528999	ZMYM1	Q5SVZ6	1142 aa		12.75	□□□□□ -0.37
PUF60-213	ENST00000528999	CAVIN1	Q6NZI2	390 aa	Known RBP	12.75	□□□□□ -0.37
PUF60-213	ENST00000528999	NEUROD6	Q96NK8	337 aa		12.75	□□□□□ -0.37
PUF60-213	ENST00000528999	NEK1	Q96PY6	1258 aa		12.75	□□□□□ -0.37
PUF60-213	ENST00000528999	ZNF609	O15014	1411 aa		12.74	□□□□□ -0.37
PUF60-213	ENST00000528999		A0A1B0GUL7	405 aa		12.74	□□□□□ -0.37
PUF60-213	ENST00000528999	RNF113A	O15541	343 aa	Known RBP	12.74	□□□□□ -0.37
PUF60-213	ENST00000528999	F13A1	P00488	732 aa		12.74	□□□□□ -0.37
PUF60-213	ENST00000528999	IFIT1	P09914	478 aa	Known RBP	12.74	□□□□□ -0.37
PUF60-213	ENST00000528999	LRSAM1	Q6UWE0	723 aa		12.74	□□□□□ -0.37
PUF60-213	ENST00000528999	NOL8	Q76FK4	1167 aa	Known RBP	12.74	□□□□□ -0.37
PUF60-213	ENST00000528999	FBXL16	Q8N461	479 aa		12.74	□□□□□ -0.37
PUF60-213	ENST00000528999	LLPH	Q9BRT6	129 aa	Known RBP	12.74	□□□□□ -0.37
PUF60-213	ENST00000528999	CTNNA3	Q9UI47	895 aa		12.74	□□□□□ -0.37
PUF60-213	ENST00000528999	GJB2	P29033	226 aa		12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	NASP	P49321	788 aa	Predicted RBP	12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	TIMM10	P62072	90 aa		12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	UBE2H	P62256	183 aa		12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	ME3	Q16798	604 aa		12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	HS1BP3	Q53T59	392 aa		12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	NLRP10	Q86W26	655 aa		12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	DNAJC2	Q99543	621 aa	Known RBP	12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	TPCN1	Q9ULQ1	816 aa		12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	TJP1	Q07157	1748 aa		12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	PLCH1	Q4KWH8	1693 aa		12.73	□□□□□ -0.37
PUF60-213	ENST00000528999	TOGARAM1	Q9Y4F4	1720 aa		12.72	□□□□□ -0.37
PUF60-213	ENST00000528999	RGL2	O15211	777 aa		12.72	□□□□□ -0.37
PUF60-213	ENST00000528999	LRRC24	Q50LG9	513 aa		12.72	□□□□□ -0.37
PUF60-213	ENST00000528999	TAF7L	Q5H9L4	462 aa		12.72	□□□□□ -0.37
PUF60-213	ENST00000528999	ZSCAN25	Q6NSZ9	544 aa		12.72	□□□□□ -0.37
PUF60-213	ENST00000528999	USP48	Q86UV5	1035 aa		12.72	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms