RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 HSPA6P17066 643 aa23.65■■□□□ 1.38
TSPAN4-215ENST00000525334 IARSP41252 1262 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-215ENST00000525334 SLFN5Q08AF3 891 aa23.65■■□□□ 1.38
TSPAN4-215ENST00000525334 GRIPAP1Q4V328 841 aa23.65■■□□□ 1.38
TSPAN4-215ENST00000525334 RBM46Q8TBY0 533 aaKnown RBP23.65■■□□□ 1.38
TSPAN4-215ENST00000525334 COL4A1P02462 1669 aa23.64■■□□□ 1.38
TSPAN4-215ENST00000525334 HSP90B1P14625 803 aaKnown RBP23.64■■□□□ 1.37
TSPAN4-215ENST00000525334 VEGFAP15692 232 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-215ENST00000525334 C16orf71Q8IYS4 520 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-215ENST00000525334 DNAAF4Q8WXU2 420 aa23.64■■□□□ 1.37
TSPAN4-215ENST00000525334 TMX4Q9H1E5 349 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-215ENST00000525334 CDCA7LQ96GN5 454 aa23.63■■□□□ 1.37
TSPAN4-215ENST00000525334 CDHR2Q9BYE9 1310 aa23.62■■□□□ 1.37
TSPAN4-215ENST00000525334 POTECB2RU33 542 aa23.62■■□□□ 1.37
TSPAN4-215ENST00000525334 SP8Q8IXZ3 490 aa23.62■■□□□ 1.37
TSPAN4-215ENST00000525334 CELF1Q92879 486 aaKnown RBP23.62■■□□□ 1.37
TSPAN4-215ENST00000525334 LRRC37AA6NMS7 1700 aa23.62■■□□□ 1.37
TSPAN4-215ENST00000525334 PDE8AO60658 829 aa23.61■■□□□ 1.37
TSPAN4-215ENST00000525334 WDR90Q96KV7 1748 aa23.61■■□□□ 1.37
TSPAN4-215ENST00000525334 COL4A5P29400 1685 aa23.6■■□□□ 1.37
TSPAN4-215ENST00000525334 TMC4Q7Z404 712 aa23.6■■□□□ 1.37
TSPAN4-215ENST00000525334 F6X3S4 739 aa23.59■■□□□ 1.37
TSPAN4-215ENST00000525334 GCKRQ14397 625 aa23.59■■□□□ 1.37
TSPAN4-215ENST00000525334 LINS1Q8NG48 757 aa23.59■■□□□ 1.37
TSPAN4-215ENST00000525334 ZNF541Q9H0D2 1346 aa23.59■■□□□ 1.37
TSPAN4-215ENST00000525334 DDNO94850 711 aaPredicted RBP23.58■■□□□ 1.37
TSPAN4-215ENST00000525334 FSTL1Q12841 308 aa23.58■■□□□ 1.37
TSPAN4-215ENST00000525334 CCDC152Q4G0S7 254 aa23.58■■□□□ 1.37
TSPAN4-215ENST00000525334 DPP8Q6V1X1 898 aaPredicted RBP23.58■■□□□ 1.37
TSPAN4-215ENST00000525334 UBE3BQ7Z3V4 1068 aa23.58■■□□□ 1.37
TSPAN4-215ENST00000525334 MPNDQ8N594 471 aa23.58■■□□□ 1.37
TSPAN4-215ENST00000525334 CCDC85AQ96PX6 553 aaPredicted RBP23.58■■□□□ 1.37
TSPAN4-215ENST00000525334 RTFDC1Q9BY42 306 aaPredicted RBP23.58■■□□□ 1.37
TSPAN4-215ENST00000525334 SEC31BQ9NQW1 1179 aa23.58■■□□□ 1.37
TSPAN4-215ENST00000525334 CEP350Q5VT06 3117 aa23.57■■□□□ 1.36
TSPAN4-215ENST00000525334 H7C1W4 665 aa23.57■■□□□ 1.36
TSPAN4-215ENST00000525334 CTSWP56202 376 aa23.57■■□□□ 1.36
TSPAN4-215ENST00000525334 TRMT2AQ8IZ69 625 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-215ENST00000525334 LARGE2Q8N3Y3 721 aa23.57■■□□□ 1.36
TSPAN4-215ENST00000525334 JDP2Q8WYK2 163 aa23.57■■□□□ 1.36
TSPAN4-215ENST00000525334 DUOX1Q9NRD9 1551 aa23.57■■□□□ 1.36
TSPAN4-215ENST00000525334 FZD9O00144 591 aa23.56■■□□□ 1.36
TSPAN4-215ENST00000525334 BEND3Q5T5X7 828 aa23.56■■□□□ 1.36
TSPAN4-215ENST00000525334 SUPT20HQ8NEM7 779 aa23.56■■□□□ 1.36
TSPAN4-215ENST00000525334 MYH3P11055 1940 aa23.56■■□□□ 1.36
TSPAN4-215ENST00000525334 PPIP5K2O43314 1243 aa23.55■■□□□ 1.36
TSPAN4-215ENST00000525334 RPS8P62241 208 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-215ENST00000525334 AOC3Q16853 763 aa23.55■■□□□ 1.36
TSPAN4-215ENST00000525334 MRPL50Q8N5N7 158 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-215ENST00000525334 CASP7P55210 303 aa23.54■■□□□ 1.36
TSPAN4-215ENST00000525334 SMC1BQ8NDV3 1235 aa23.54■■□□□ 1.36
TSPAN4-215ENST00000525334 APLP1P51693 650 aa23.53■■□□□ 1.36
TSPAN4-215ENST00000525334 TTLL11Q8NHH1 800 aa23.53■■□□□ 1.36
TSPAN4-215ENST00000525334 SSH1Q8WYL5 1049 aa23.53■■□□□ 1.36
TSPAN4-215ENST00000525334 VPS33BQ9H267 617 aa23.53■■□□□ 1.36
TSPAN4-215ENST00000525334 NIM1KQ8IY84 436 aa23.52■■□□□ 1.36
TSPAN4-215ENST00000525334 L3MBTL3Q96JM7 780 aaPredicted RBP23.52■■□□□ 1.36
TSPAN4-215ENST00000525334 NSFL1CQ9UNZ2 370 aaKnown RBP23.52■■□□□ 1.36
TSPAN4-215ENST00000525334 LTBP1Q14766 1721 aa23.52■■□□□ 1.36
TSPAN4-215ENST00000525334 EIF6P56537 245 aaKnown RBP23.51■■□□□ 1.35
TSPAN4-215ENST00000525334 GPSM2P81274 684 aa23.51■■□□□ 1.35
TSPAN4-215ENST00000525334 PLA2G12BQ9BX93 195 aa23.51■■□□□ 1.35
TSPAN4-215ENST00000525334 BCL2L13Q9BXK5 485 aa23.51■■□□□ 1.35
TSPAN4-215ENST00000525334 GREM2Q9H772 168 aa23.51■■□□□ 1.35
TSPAN4-215ENST00000525334 RTL9Q8NET4 1388 aa23.51■■□□□ 1.35
TSPAN4-215ENST00000525334 KIAA2012Q0VF49 1180 aa23.5■■□□□ 1.35
TSPAN4-215ENST00000525334 SLC4A10Q6U841 1118 aa23.5■■□□□ 1.35
TSPAN4-215ENST00000525334 ANKRD18AQ8IVF6 992 aa23.5■■□□□ 1.35
TSPAN4-215ENST00000525334 GPC2Q8N158 579 aa23.49■■□□□ 1.35
TSPAN4-215ENST00000525334 SCN4AP35499 1836 aa23.49■■□□□ 1.35
TSPAN4-215ENST00000525334 IQCA1LA6NCM1 817 aa23.48■■□□□ 1.35
TSPAN4-215ENST00000525334 ALDH1L2Q3SY69 923 aa23.48■■□□□ 1.35
TSPAN4-215ENST00000525334 CDC5LQ99459 802 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-215ENST00000525334 PTPRCP08575 1304 aa23.48■■□□□ 1.35
TSPAN4-215ENST00000525334 SPEF2Q9C093 1822 aa23.47■■□□□ 1.35
TSPAN4-215ENST00000525334 ALDH1L1O75891 902 aa23.47■■□□□ 1.35
TSPAN4-215ENST00000525334 CT47B1P0C2W7 299 aaPredicted RBP23.47■■□□□ 1.35
TSPAN4-215ENST00000525334 SRCIN1Q9C0H9 1055 aa23.47■■□□□ 1.35
TSPAN4-215ENST00000525334 SMC4Q9NTJ3 1288 aa23.47■■□□□ 1.35
TSPAN4-215ENST00000525334 POLLQ9UGP5 575 aa23.47■■□□□ 1.35
TSPAN4-215ENST00000525334 ZNRF3Q9ULT6 936 aa23.47■■□□□ 1.35
TSPAN4-215ENST00000525334 GJA3Q9Y6H8 435 aa23.47■■□□□ 1.35
TSPAN4-215ENST00000525334 C6orf229H3BNL8 230 aa23.46■■□□□ 1.35
TSPAN4-215ENST00000525334 GRM8O00222 908 aa23.46■■□□□ 1.35
TSPAN4-215ENST00000525334 HNRNPUQ00839 825 aaKnown RBP eCLIP23.46■■□□□ 1.35
TSPAN4-215ENST00000525334 FAM161AQ3B820 660 aa23.46■■□□□ 1.35
TSPAN4-215ENST00000525334 TBC1D16Q8TBP0 767 aa23.46■■□□□ 1.35
TSPAN4-215ENST00000525334 PODXL2Q9NZ53 605 aa23.46■■□□□ 1.35
TSPAN4-215ENST00000525334 CSF1RP07333 972 aa23.45■■□□□ 1.34
TSPAN4-215ENST00000525334 WASHC4Q2M389 1173 aa23.45■■□□□ 1.34
TSPAN4-215ENST00000525334 DNAJC5GQ8N7S2 189 aa23.45■■□□□ 1.34
TSPAN4-215ENST00000525334 TAF1DQ9H5J8 278 aaPredicted RBP23.45■■□□□ 1.34
TSPAN4-215ENST00000525334 ANKIB1Q9P2G1 1089 aa23.45■■□□□ 1.34
TSPAN4-215ENST00000525334 ITGA6P23229 1130 aa23.44■■□□□ 1.34
TSPAN4-215ENST00000525334 GPR101Q96P66 508 aaPredicted RBP23.44■■□□□ 1.34
TSPAN4-215ENST00000525334 C9orf78Q9NZ63 289 aaPredicted RBP23.44■■□□□ 1.34
TSPAN4-215ENST00000525334 HACL1Q9UJ83 578 aa23.44■■□□□ 1.34
TSPAN4-215ENST00000525334 RIMBP2O15034 1052 aa23.43■■□□□ 1.34
TSPAN4-215ENST00000525334 POTEIP0CG38 1075 aa23.43■■□□□ 1.34
TSPAN4-215ENST00000525334 POTEJP0CG39 1038 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms