RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 HOXB7P09629 217 aa15.71■□□□□ 0.11
CHKA-203ENST00000525155 VEGFBP49765 207 aa15.71■□□□□ 0.11
CHKA-203ENST00000525155 EIF6P56537 245 aaKnown RBP15.71■□□□□ 0.11
CHKA-203ENST00000525155 GRIPAP1Q4V328 841 aa15.71■□□□□ 0.11
CHKA-203ENST00000525155 C8orf58Q8NAV2 365 aa15.71■□□□□ 0.11
CHKA-203ENST00000525155 CNTNAP1P78357 1384 aa15.71■□□□□ 0.11
CHKA-203ENST00000525155 LTBP1Q14766 1721 aa15.71■□□□□ 0.1
CHKA-203ENST00000525155 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
CHKA-203ENST00000525155 ZNF521Q96K83 1311 aa15.7■□□□□ 0.1
CHKA-203ENST00000525155 TMEM88BA6NKF7 163 aa15.7■□□□□ 0.1
CHKA-203ENST00000525155 ELL2O00472 640 aaPredicted RBP15.7■□□□□ 0.1
CHKA-203ENST00000525155 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
CHKA-203ENST00000525155 GOLGA2Q08379 1002 aa15.7■□□□□ 0.1
CHKA-203ENST00000525155 TRIM28Q13263 835 aaKnown RBP15.7■□□□□ 0.1
CHKA-203ENST00000525155 PNMA8AQ86V59 439 aaPredicted RBP15.7■□□□□ 0.1
CHKA-203ENST00000525155 CELF1Q92879 486 aaKnown RBP15.7■□□□□ 0.1
CHKA-203ENST00000525155 PHAXQ9H814 394 aaKnown RBP15.7■□□□□ 0.1
CHKA-203ENST00000525155 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
CHKA-203ENST00000525155 ADAMTSL1Q8N6G6 1762 aa15.7■□□□□ 0.1
CHKA-203ENST00000525155 YDJCA8MPS7 323 aa15.69■□□□□ 0.1
CHKA-203ENST00000525155 E9PSI1 815 aa15.69■□□□□ 0.1
CHKA-203ENST00000525155 HNRNPUQ00839 825 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHKA-203ENST00000525155 GRAPQ13588 217 aa15.69■□□□□ 0.1
CHKA-203ENST00000525155 SF3B3Q15393 1217 aaKnown RBP15.69■□□□□ 0.1
CHKA-203ENST00000525155 GRAPLQ8TC17 118 aaPredicted RBP15.69■□□□□ 0.1
CHKA-203ENST00000525155 COL4A1P02462 1669 aa15.68■□□□□ 0.1
CHKA-203ENST00000525155 SHTN1A0MZ66 631 aa15.68■□□□□ 0.1
CHKA-203ENST00000525155 HIRAP54198 1017 aaPredicted RBP15.68■□□□□ 0.1
CHKA-203ENST00000525155 KIAA2012Q0VF49 1180 aa15.68■□□□□ 0.1
CHKA-203ENST00000525155 RTL5Q5HYW3 569 aaPredicted RBP15.68■□□□□ 0.1
CHKA-203ENST00000525155 CST9Q5W186 159 aa15.68■□□□□ 0.1
CHKA-203ENST00000525155 NIM1KQ8IY84 436 aa15.68■□□□□ 0.1
CHKA-203ENST00000525155 MPNDQ8N594 471 aa15.68■□□□□ 0.1
CHKA-203ENST00000525155 TSPYL6Q8N831 410 aa15.68■□□□□ 0.1
CHKA-203ENST00000525155 VPS33BQ9H267 617 aa15.68■□□□□ 0.1
CHKA-203ENST00000525155 ZNRF3Q9ULT6 936 aa15.68■□□□□ 0.1
CHKA-203ENST00000525155 SCN4AP35499 1836 aa15.67■□□□□ 0.1
CHKA-203ENST00000525155 TRAF5O00463 557 aa15.67■□□□□ 0.1
CHKA-203ENST00000525155 FOXN1O15353 648 aa15.67■□□□□ 0.1
CHKA-203ENST00000525155 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
CHKA-203ENST00000525155 DDX46Q7L014 1031 aaKnown RBP15.67■□□□□ 0.1
CHKA-203ENST00000525155 JARID2Q92833 1246 aaPredicted RBP15.67■□□□□ 0.1
CHKA-203ENST00000525155 HYPKQ9NX55 129 aa15.67■□□□□ 0.1
CHKA-203ENST00000525155 GPRC5DQ9NZD1 345 aa15.67■□□□□ 0.1
CHKA-203ENST00000525155 RASSF10A6NK89 507 aa15.66■□□□□ 0.1
CHKA-203ENST00000525155 RAD17O75943 681 aa15.66■□□□□ 0.1
CHKA-203ENST00000525155 GMPSP49915 693 aaPredicted RBP15.66■□□□□ 0.1
CHKA-203ENST00000525155 KCNQ5Q9NR82 932 aa15.66■□□□□ 0.1
CHKA-203ENST00000525155 POLLQ9UGP5 575 aa15.66■□□□□ 0.1
CHKA-203ENST00000525155 USP50Q70EL3 339 aaPredicted RBP15.65■□□□□ 0.1
CHKA-203ENST00000525155 PGAP2Q9UHJ9 254 aa15.65■□□□□ 0.1
CHKA-203ENST00000525155 FANCIQ9NVI1 1328 aa15.65■□□□□ 0.1
CHKA-203ENST00000525155 IRS4O14654 1257 aaPredicted RBP15.64■□□□□ 0.09
CHKA-203ENST00000525155 GPSM2P81274 684 aa15.64■□□□□ 0.09
CHKA-203ENST00000525155 DLK2Q6UY11 383 aa15.64■□□□□ 0.09
CHKA-203ENST00000525155 TNS4Q8IZW8 715 aa15.64■□□□□ 0.09
CHKA-203ENST00000525155 TSR2Q969E8 191 aaKnown RBP15.64■□□□□ 0.09
CHKA-203ENST00000525155 GPR101Q96P66 508 aaPredicted RBP15.64■□□□□ 0.09
CHKA-203ENST00000525155 SEC31BQ9NQW1 1179 aa15.64■□□□□ 0.09
CHKA-203ENST00000525155 WBP1LQ9NX94 342 aa15.64■□□□□ 0.09
CHKA-203ENST00000525155 ZBED9Q6R2W3 1325 aa15.64■□□□□ 0.09
CHKA-203ENST00000525155 LMOD1P29536 600 aaPredicted RBP15.63■□□□□ 0.09
CHKA-203ENST00000525155 SLFN5Q08AF3 891 aa15.63■□□□□ 0.09
CHKA-203ENST00000525155 DEFB115Q30KQ5 88 aa15.63■□□□□ 0.09
CHKA-203ENST00000525155 CIAPIN1Q6FI81 312 aa15.63■□□□□ 0.09
CHKA-203ENST00000525155 SUPT20HQ8NEM7 779 aa15.63■□□□□ 0.09
CHKA-203ENST00000525155 TRPM4Q8TD43 1214 aa15.63■□□□□ 0.09
CHKA-203ENST00000525155 ADARB2Q9NS39 739 aaKnown RBP15.63■□□□□ 0.09
CHKA-203ENST00000525155 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
CHKA-203ENST00000525155 DUOX1Q9NRD9 1551 aa15.62■□□□□ 0.09
CHKA-203ENST00000525155 WTIPA6NIX2 430 aaPredicted RBP15.62■□□□□ 0.09
CHKA-203ENST00000525155 RPS8P62241 208 aaKnown RBP15.62■□□□□ 0.09
CHKA-203ENST00000525155 CCDC30Q5VVM6 783 aa15.62■□□□□ 0.09
CHKA-203ENST00000525155 RIC3Q7Z5B4 369 aa15.62■□□□□ 0.09
CHKA-203ENST00000525155 ZBTB38Q8NAP3 1195 aaPredicted RBP15.62■□□□□ 0.09
CHKA-203ENST00000525155 MYD88Q99836 296 aa15.62■□□□□ 0.09
CHKA-203ENST00000525155 NSFL1CQ9UNZ2 370 aaKnown RBP15.62■□□□□ 0.09
CHKA-203ENST00000525155 TAF1P21675 1872 aa15.61■□□□□ 0.09
CHKA-203ENST00000525155 EGFRP00533 1210 aa15.61■□□□□ 0.09
CHKA-203ENST00000525155 TWISTNBQ3B726 338 aaPredicted RBP15.61■□□□□ 0.09
CHKA-203ENST00000525155 TMX4Q9H1E5 349 aaPredicted RBP15.61■□□□□ 0.09
CHKA-203ENST00000525155 WDR33Q9C0J8 1336 aaKnown RBP15.61■□□□□ 0.09
CHKA-203ENST00000525155 PSMD14O00487 310 aa15.6■□□□□ 0.09
CHKA-203ENST00000525155 RIMBP2O15034 1052 aa15.6■□□□□ 0.09
CHKA-203ENST00000525155 CAPN15O75808 1086 aa15.6■□□□□ 0.09
CHKA-203ENST00000525155 IGKV5-2P06315 115 aa15.6■□□□□ 0.09
CHKA-203ENST00000525155 DOK7Q18PE1 504 aa15.6■□□□□ 0.09
CHKA-203ENST00000525155 G2E3Q7L622 706 aa15.6■□□□□ 0.09
CHKA-203ENST00000525155 TMC4Q7Z404 712 aa15.6■□□□□ 0.09
CHKA-203ENST00000525155 TBC1D16Q8TBP0 767 aa15.6■□□□□ 0.09
CHKA-203ENST00000525155 METTL22Q9BUU2 404 aaPredicted RBP15.6■□□□□ 0.09
CHKA-203ENST00000525155 GLIS2Q9BZE0 524 aaPredicted RBP15.6■□□□□ 0.09
CHKA-203ENST00000525155 DBNDD1Q9H9R9 158 aa15.6■□□□□ 0.09
CHKA-203ENST00000525155 SPINK5Q9NQ38 1064 aaPredicted RBP15.6■□□□□ 0.09
CHKA-203ENST00000525155 CNOT7Q9UIV1 285 aaKnown RBP15.6■□□□□ 0.09
CHKA-203ENST00000525155 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
CHKA-203ENST00000525155 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
CHKA-203ENST00000525155 WASHC4Q2M389 1173 aa15.59■□□□□ 0.09
CHKA-203ENST00000525155 CYP4F22Q6NT55 531 aa15.59■□□□□ 0.09
CHKA-203ENST00000525155 TRMT2AQ8IZ69 625 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms