RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SLC4A2P04920 1241 aa23.82■■□□□ 1.4
CAPN1-203ENST00000525013 EIF6P56537 245 aaKnown RBP23.82■■□□□ 1.4
CAPN1-203ENST00000525013 SF3B3Q15393 1217 aaKnown RBP23.82■■□□□ 1.4
CAPN1-203ENST00000525013 DPP8Q6V1X1 898 aaPredicted RBP23.82■■□□□ 1.4
CAPN1-203ENST00000525013 KSR2Q6VAB6 950 aa23.82■■□□□ 1.4
CAPN1-203ENST00000525013 MPNDQ8N594 471 aa23.82■■□□□ 1.4
CAPN1-203ENST00000525013 PI4KAP1Q8N8J0 262 aa23.82■■□□□ 1.4
CAPN1-203ENST00000525013 CACNA1FO60840 1977 aa23.82■■□□□ 1.4
CAPN1-203ENST00000525013 HSP90B1P14625 803 aaKnown RBP23.81■■□□□ 1.4
CAPN1-203ENST00000525013 NIM1KQ8IY84 436 aa23.81■■□□□ 1.4
CAPN1-203ENST00000525013 SUPT20HQ8NEM7 779 aa23.81■■□□□ 1.4
CAPN1-203ENST00000525013 JARID2Q92833 1246 aaPredicted RBP23.81■■□□□ 1.4
CAPN1-203ENST00000525013 COL4A5P29400 1685 aa23.8■■□□□ 1.4
CAPN1-203ENST00000525013 EXOSC9Q06265 439 aaKnown RBP23.8■■□□□ 1.4
CAPN1-203ENST00000525013 AOC3Q16853 763 aa23.8■■□□□ 1.4
CAPN1-203ENST00000525013 G2E3Q7L622 706 aa23.8■■□□□ 1.4
CAPN1-203ENST00000525013 TMC4Q7Z404 712 aa23.8■■□□□ 1.4
CAPN1-203ENST00000525013 GJA3Q9Y6H8 435 aa23.8■■□□□ 1.4
CAPN1-203ENST00000525013 PCCAP05165 728 aaPredicted RBP23.79■■□□□ 1.4
CAPN1-203ENST00000525013 HTRA3P83110 453 aa23.79■■□□□ 1.4
CAPN1-203ENST00000525013 NEXNQ0ZGT2 675 aa23.79■■□□□ 1.4
CAPN1-203ENST00000525013 GPC2Q8N158 579 aa23.79■■□□□ 1.4
CAPN1-203ENST00000525013 CELF1Q92879 486 aaKnown RBP23.79■■□□□ 1.4
CAPN1-203ENST00000525013 TAF1DQ9H5J8 278 aaPredicted RBP23.79■■□□□ 1.4
CAPN1-203ENST00000525013 HACL1Q9UJ83 578 aa23.79■■□□□ 1.4
CAPN1-203ENST00000525013 POTEIP0CG38 1075 aa23.78■■□□□ 1.4
CAPN1-203ENST00000525013 POTEJP0CG39 1038 aa23.78■■□□□ 1.4
CAPN1-203ENST00000525013 RTFDC1Q9BY42 306 aaPredicted RBP23.78■■□□□ 1.4
CAPN1-203ENST00000525013 EAPPQ56P03 285 aaPredicted RBP23.77■■□□□ 1.4
CAPN1-203ENST00000525013 CHADLQ6NUI6 762 aa23.77■■□□□ 1.4
CAPN1-203ENST00000525013 VPS33BQ9H267 617 aa23.77■■□□□ 1.4
CAPN1-203ENST00000525013 MYH16Q9H6N6 1097 aa23.77■■□□□ 1.4
CAPN1-203ENST00000525013 SPINK5Q9NQ38 1064 aaPredicted RBP23.77■■□□□ 1.4
CAPN1-203ENST00000525013 VAMP4O75379 141 aa23.76■■□□□ 1.39
CAPN1-203ENST00000525013 PDE8AO60658 829 aa23.75■■□□□ 1.39
CAPN1-203ENST00000525013 IGKV5-2P06315 115 aa23.75■■□□□ 1.39
CAPN1-203ENST00000525013 EPHX2P34913 555 aa23.75■■□□□ 1.39
CAPN1-203ENST00000525013 RPS8P62241 208 aaKnown RBP23.75■■□□□ 1.39
CAPN1-203ENST00000525013 FLIIQ13045 1269 aa23.75■■□□□ 1.39
CAPN1-203ENST00000525013 DNAJC5GQ8N7S2 189 aa23.75■■□□□ 1.39
CAPN1-203ENST00000525013 CCDC85AQ96PX6 553 aaPredicted RBP23.75■■□□□ 1.39
CAPN1-203ENST00000525013 NSFL1CQ9UNZ2 370 aaKnown RBP23.75■■□□□ 1.39
CAPN1-203ENST00000525013 LRRC37AA6NMS7 1700 aa23.74■■□□□ 1.39
CAPN1-203ENST00000525013 FKBP5Q13451 457 aaPredicted RBP23.74■■□□□ 1.39
CAPN1-203ENST00000525013 CWF19L2Q2TBE0 894 aaKnown RBP23.74■■□□□ 1.39
CAPN1-203ENST00000525013 CCDC152Q4G0S7 254 aa23.74■■□□□ 1.39
CAPN1-203ENST00000525013 LDHDQ86WU2 507 aa23.74■■□□□ 1.39
CAPN1-203ENST00000525013 CLEC11AQ9Y240 323 aa23.74■■□□□ 1.39
CAPN1-203ENST00000525013 LMOD1P29536 600 aaPredicted RBP23.73■■□□□ 1.39
CAPN1-203ENST00000525013 SEC31BQ9NQW1 1179 aa23.73■■□□□ 1.39
CAPN1-203ENST00000525013 ZNRF3Q9ULT6 936 aa23.73■■□□□ 1.39
CAPN1-203ENST00000525013 NEURL1BA8MQ27 555 aa23.72■■□□□ 1.39
CAPN1-203ENST00000525013 KIAA2012Q0VF49 1180 aa23.72■■□□□ 1.39
CAPN1-203ENST00000525013 COL4A1P02462 1669 aa23.72■■□□□ 1.39
CAPN1-203ENST00000525013 MYH3P11055 1940 aa23.72■■□□□ 1.39
CAPN1-203ENST00000525013 CDHR2Q9BYE9 1310 aa23.71■■□□□ 1.39
CAPN1-203ENST00000525013 C6orf229H3BNL8 230 aa23.71■■□□□ 1.39
CAPN1-203ENST00000525013 PNMA8AQ86V59 439 aaPredicted RBP23.71■■□□□ 1.39
CAPN1-203ENST00000525013 GPSM2P81274 684 aa23.7■■□□□ 1.38
CAPN1-203ENST00000525013 CXCL9Q07325 125 aa23.7■■□□□ 1.38
CAPN1-203ENST00000525013 DNAAF4Q8WXU2 420 aa23.7■■□□□ 1.38
CAPN1-203ENST00000525013 WASHC4Q2M389 1173 aa23.69■■□□□ 1.38
CAPN1-203ENST00000525013 UBE3BQ7Z3V4 1068 aa23.69■■□□□ 1.38
CAPN1-203ENST00000525013 DUOX1Q9NRD9 1551 aa23.69■■□□□ 1.38
CAPN1-203ENST00000525013 RIMBP2O15034 1052 aa23.68■■□□□ 1.38
CAPN1-203ENST00000525013 RAD17O75943 681 aa23.68■■□□□ 1.38
CAPN1-203ENST00000525013 SCNN1DP51172 638 aa23.68■■□□□ 1.38
CAPN1-203ENST00000525013 CTSWP56202 376 aa23.68■■□□□ 1.38
CAPN1-203ENST00000525013 KLRG1Q96E93 195 aa23.68■■□□□ 1.38
CAPN1-203ENST00000525013 POLLQ9UGP5 575 aa23.68■■□□□ 1.38
CAPN1-203ENST00000525013 EPS15P42566 896 aa23.67■■□□□ 1.38
CAPN1-203ENST00000525013 GCKRQ14397 625 aa23.67■■□□□ 1.38
CAPN1-203ENST00000525013 CIAPIN1Q6FI81 312 aa23.67■■□□□ 1.38
CAPN1-203ENST00000525013 ANKRD18AQ8IVF6 992 aa23.67■■□□□ 1.38
CAPN1-203ENST00000525013 ANKIB1Q9P2G1 1089 aa23.67■■□□□ 1.38
CAPN1-203ENST00000525013 LTBP1Q14766 1721 aa23.67■■□□□ 1.38
CAPN1-203ENST00000525013 TNIP1Q15025 636 aa23.66■■□□□ 1.38
CAPN1-203ENST00000525013 EYA3Q99504 573 aa23.66■■□□□ 1.38
CAPN1-203ENST00000525013 ZNF521Q96K83 1311 aa23.65■■□□□ 1.38
CAPN1-203ENST00000525013 H7C1W4 665 aa23.65■■□□□ 1.38
CAPN1-203ENST00000525013 MAP1SQ66K74 1059 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-203ENST00000525013 LINS1Q8NG48 757 aa23.65■■□□□ 1.38
CAPN1-203ENST00000525013 TTLL11Q8NHH1 800 aa23.65■■□□□ 1.38
CAPN1-203ENST00000525013 TBC1D16Q8TBP0 767 aa23.65■■□□□ 1.38
CAPN1-203ENST00000525013 F6X3S4 739 aa23.64■■□□□ 1.37
CAPN1-203ENST00000525013 GMPSP49915 693 aaPredicted RBP23.64■■□□□ 1.37
CAPN1-203ENST00000525013 GPR101Q96P66 508 aaPredicted RBP23.64■■□□□ 1.37
CAPN1-203ENST00000525013 CDC5LQ99459 802 aaKnown RBP23.64■■□□□ 1.37
CAPN1-203ENST00000525013 BCL2L13Q9BXK5 485 aa23.64■■□□□ 1.37
CAPN1-203ENST00000525013 DBNDD1Q9H9R9 158 aa23.64■■□□□ 1.37
CAPN1-203ENST00000525013 ADAMTSL1Q8N6G6 1762 aa23.64■■□□□ 1.37
CAPN1-203ENST00000525013 SPEF2Q9C093 1822 aa23.63■■□□□ 1.37
CAPN1-203ENST00000525013 YDJCA8MPS7 323 aa23.63■■□□□ 1.37
CAPN1-203ENST00000525013 UFL1O94874 794 aa23.63■■□□□ 1.37
CAPN1-203ENST00000525013 GREM2Q9H772 168 aa23.63■■□□□ 1.37
CAPN1-203ENST00000525013 GPRC5DQ9NZD1 345 aa23.63■■□□□ 1.37
CAPN1-203ENST00000525013 GGA1Q9UJY5 639 aa23.63■■□□□ 1.37
CAPN1-203ENST00000525013 ITGBL1O95965 494 aaPredicted RBP23.62■■□□□ 1.37
CAPN1-203ENST00000525013 DOK7Q18PE1 504 aa23.62■■□□□ 1.37
CAPN1-203ENST00000525013 CNTROBQ8N137 903 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms