RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PTF1AQ7RTS3 328 aa10.77□□□□□ -0.69
NEDD8-203ENST00000524927 ZSCAN1Q8NBB4 408 aa10.77□□□□□ -0.69
NEDD8-203ENST00000524927 FOXJ1Q92949 421 aa10.77□□□□□ -0.69
NEDD8-203ENST00000524927 IRF7Q92985 503 aa10.77□□□□□ -0.69
NEDD8-203ENST00000524927 PURBQ96QR8 312 aaKnown RBP10.77□□□□□ -0.69
NEDD8-203ENST00000524927 ALG2Q9H553 416 aa10.77□□□□□ -0.69
NEDD8-203ENST00000524927 STRN4Q9NRL3 753 aa10.77□□□□□ -0.69
NEDD8-203ENST00000524927 THRAP3Q9Y2W1 955 aaKnown RBP10.77□□□□□ -0.69
NEDD8-203ENST00000524927 PARP4Q9UKK3 1724 aaKnown RBP10.76□□□□□ -0.69
NEDD8-203ENST00000524927 ZBBXA8MT70 800 aa10.76□□□□□ -0.69
NEDD8-203ENST00000524927 MRPL14Q6P1L8 145 aaKnown RBP10.76□□□□□ -0.69
NEDD8-203ENST00000524927 ARMC2Q8NEN0 867 aa10.76□□□□□ -0.69
NEDD8-203ENST00000524927 PMFBP1Q8TBY8 1022 aa10.76□□□□□ -0.69
NEDD8-203ENST00000524927 ABHD8Q96I13 439 aa10.76□□□□□ -0.69
NEDD8-203ENST00000524927 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
NEDD8-203ENST00000524927 ATP7BP35670 1465 aa10.75□□□□□ -0.69
NEDD8-203ENST00000524927 NRXN1Q9ULB1 1477 aa10.75□□□□□ -0.69
NEDD8-203ENST00000524927 WDR4P57081 412 aaKnown RBP10.75□□□□□ -0.69
NEDD8-203ENST00000524927 ZNF326Q5BKZ1 582 aaKnown RBP10.75□□□□□ -0.69
NEDD8-203ENST00000524927 NPAS3Q8IXF0 933 aa10.75□□□□□ -0.69
NEDD8-203ENST00000524927 MPNDQ8N594 471 aa10.75□□□□□ -0.69
NEDD8-203ENST00000524927 ZC3H4Q9UPT8 1303 aaKnown RBP10.75□□□□□ -0.69
NEDD8-203ENST00000524927 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
NEDD8-203ENST00000524927 TOPAZ1Q8N9V7 1692 aa10.75□□□□□ -0.69
NEDD8-203ENST00000524927 BCL9O00512 1426 aa10.75□□□□□ -0.69
NEDD8-203ENST00000524927 FBXO45P0C2W1 286 aa10.74□□□□□ -0.69
NEDD8-203ENST00000524927 RFX1P22670 979 aa10.74□□□□□ -0.69
NEDD8-203ENST00000524927 C4orf48Q5BLP8 95 aa10.74□□□□□ -0.69
NEDD8-203ENST00000524927 C16orf71Q8IYS4 520 aaPredicted RBP10.74□□□□□ -0.69
NEDD8-203ENST00000524927 ZFAND3Q9H8U3 227 aa10.74□□□□□ -0.69
NEDD8-203ENST00000524927 FMN2Q9NZ56 1722 aa10.74□□□□□ -0.69
NEDD8-203ENST00000524927 SSH2Q76I76 1423 aa10.74□□□□□ -0.69
NEDD8-203ENST00000524927 PDIA4P13667 645 aaKnown RBP10.73□□□□□ -0.69
NEDD8-203ENST00000524927 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
NEDD8-203ENST00000524927 LOC100996750A0A140TA64 210 aa10.72□□□□□ -0.69
NEDD8-203ENST00000524927 EVA1CP58658 441 aa10.72□□□□□ -0.69
NEDD8-203ENST00000524927 KRTAP4-6Q9BYQ5 205 aa10.72□□□□□ -0.69
NEDD8-203ENST00000524927 PPP1R12CQ9BZL4 782 aa10.72□□□□□ -0.69
NEDD8-203ENST00000524927 NMRK2Q9NPI5 230 aa10.72□□□□□ -0.69
NEDD8-203ENST00000524927 PAPPAQ13219 1627 aa10.72□□□□□ -0.69
NEDD8-203ENST00000524927 E9PCH4 1651 aa10.72□□□□□ -0.69
NEDD8-203ENST00000524927 NR3C2P08235 984 aa10.71□□□□□ -0.69
NEDD8-203ENST00000524927 PTK2Q05397 1052 aa10.71□□□□□ -0.69
NEDD8-203ENST00000524927 KIAA0232Q92628 1395 aa10.71□□□□□ -0.69
NEDD8-203ENST00000524927 PDXDC2PQ6P474 469 aa10.7□□□□□ -0.7
NEDD8-203ENST00000524927 GPKOWQ92917 476 aaPredicted RBP eCLIP10.7□□□□□ -0.7
NEDD8-203ENST00000524927 CDK15Q96Q40 435 aa10.7□□□□□ -0.7
NEDD8-203ENST00000524927 CD2APQ9Y5K6 639 aa10.7□□□□□ -0.7
NEDD8-203ENST00000524927 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-203ENST00000524927 FOXN1O15353 648 aa10.69□□□□□ -0.7
NEDD8-203ENST00000524927 ADH1CP00326 375 aa10.69□□□□□ -0.7
NEDD8-203ENST00000524927 GRM5P41594 1212 aa10.69□□□□□ -0.7
NEDD8-203ENST00000524927 ZNF827Q17R98 1081 aa10.69□□□□□ -0.7
NEDD8-203ENST00000524927 LARP1Q6PKG0 1096 aaKnown RBP10.69□□□□□ -0.7
NEDD8-203ENST00000524927 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
NEDD8-203ENST00000524927 TFIP11Q9UBB9 837 aaKnown RBP10.69□□□□□ -0.7
NEDD8-203ENST00000524927 ALS2Q96Q42 1657 aa10.69□□□□□ -0.7
NEDD8-203ENST00000524927 DAPK1P53355 1430 aa10.68□□□□□ -0.7
NEDD8-203ENST00000524927 CRYBG1Q9Y4K1 1723 aa10.68□□□□□ -0.7
NEDD8-203ENST00000524927 LMOD1P29536 600 aaPredicted RBP10.68□□□□□ -0.7
NEDD8-203ENST00000524927 CTCFP49711 727 aaPredicted RBP10.68□□□□□ -0.7
NEDD8-203ENST00000524927 ARID5BQ14865 1188 aa10.68□□□□□ -0.7
NEDD8-203ENST00000524927 CHRNA2Q15822 529 aa10.68□□□□□ -0.7
NEDD8-203ENST00000524927 DDB1Q16531 1140 aa10.68□□□□□ -0.7
NEDD8-203ENST00000524927 GPSM3Q9Y4H4 160 aa10.68□□□□□ -0.7
NEDD8-203ENST00000524927 QSER1Q2KHR3 1735 aa10.67□□□□□ -0.7
NEDD8-203ENST00000524927 TRPM3Q9HCF6 1732 aaPredicted RBP10.67□□□□□ -0.7
NEDD8-203ENST00000524927 BRD4O60885 1362 aaPredicted RBP10.67□□□□□ -0.7
NEDD8-203ENST00000524927 CFAP70Q5T0N1 1121 aa10.67□□□□□ -0.7
NEDD8-203ENST00000524927 SMC1BQ8NDV3 1235 aa10.67□□□□□ -0.7
NEDD8-203ENST00000524927 UCN2Q96RP3 112 aa10.67□□□□□ -0.7
NEDD8-203ENST00000524927 C10orf71Q711Q0 1435 aa10.67□□□□□ -0.7
NEDD8-203ENST00000524927 PHRF1Q9P1Y6 1649 aaKnown RBP10.66□□□□□ -0.7
NEDD8-203ENST00000524927 CCDC85CA6NKD9 419 aa10.66□□□□□ -0.7
NEDD8-203ENST00000524927 ZIC2O95409 532 aaPredicted RBP10.66□□□□□ -0.7
NEDD8-203ENST00000524927 SCARF1Q14162 830 aa10.66□□□□□ -0.7
NEDD8-203ENST00000524927 C6orf118Q5T5N4 469 aa10.66□□□□□ -0.7
NEDD8-203ENST00000524927 WAPLQ7Z5K2 1190 aa10.66□□□□□ -0.7
NEDD8-203ENST00000524927 FAM174AQ8TBP5 190 aa10.66□□□□□ -0.7
NEDD8-203ENST00000524927 PBXIP1Q96AQ6 731 aa10.66□□□□□ -0.7
NEDD8-203ENST00000524927 ARHGAP9Q9BRR9 750 aa10.66□□□□□ -0.7
NEDD8-203ENST00000524927 PNPLA7Q6ZV29 1317 aa10.65□□□□□ -0.7
NEDD8-203ENST00000524927 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-203ENST00000524927 TNRC18O15417 2968 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-203ENST00000524927 ZBTB33Q86T24 672 aa10.65□□□□□ -0.7
NEDD8-203ENST00000524927 ZNF592Q92610 1267 aa10.65□□□□□ -0.7
NEDD8-203ENST00000524927 PCDHB9Q9Y5E1 797 aa10.65□□□□□ -0.7
NEDD8-203ENST00000524927 ANKRD50Q9ULJ7 1429 aa10.65□□□□□ -0.7
NEDD8-203ENST00000524927 LRRC37A3O60309 1634 aa10.65□□□□□ -0.7
NEDD8-203ENST00000524927 CLTCL1P53675 1640 aa10.65□□□□□ -0.7
NEDD8-203ENST00000524927 CICQ96RK0 1608 aaPredicted RBP10.65□□□□□ -0.7
NEDD8-203ENST00000524927 TBC1D9Q6ZT07 1266 aa10.64□□□□□ -0.71
NEDD8-203ENST00000524927 MARCH10Q8NA82 808 aaPredicted RBP10.64□□□□□ -0.71
NEDD8-203ENST00000524927 RGPD8O14715 1765 aaPredicted RBP10.64□□□□□ -0.71
NEDD8-203ENST00000524927 GPRASP1Q5JY77 1395 aa10.64□□□□□ -0.71
NEDD8-203ENST00000524927 VSIG8P0DPA2 414 aa10.63□□□□□ -0.71
NEDD8-203ENST00000524927 AGERQ15109 404 aa10.63□□□□□ -0.71
NEDD8-203ENST00000524927 RETREG2Q8NC44 543 aa10.63□□□□□ -0.71
NEDD8-203ENST00000524927 AIDAQ96BJ3 306 aa10.63□□□□□ -0.71
NEDD8-203ENST00000524927 CHIC2Q9UKJ5 165 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms