RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 MAP3K15Q6ZN16 1313 aa14.13□□□□□ -0.15
PTPRK-216ENST00000524481 NLRP10Q86W26 655 aa14.13□□□□□ -0.15
PTPRK-216ENST00000524481 CCDC83Q8IWF9 413 aa14.13□□□□□ -0.15
PTPRK-216ENST00000524481 SEC31BQ9NQW1 1179 aa14.13□□□□□ -0.15
PTPRK-216ENST00000524481 TAF6LQ9Y6J9 622 aa14.13□□□□□ -0.15
PTPRK-216ENST00000524481 PRPF40AO75400 957 aaKnown RBP14.13□□□□□ -0.15
PTPRK-216ENST00000524481 IDH1O75874 414 aaKnown RBP14.13□□□□□ -0.15
PTPRK-216ENST00000524481 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
PTPRK-216ENST00000524481 HAND2P61296 217 aa14.13□□□□□ -0.15
PTPRK-216ENST00000524481 ITPK1Q13572 414 aa14.13□□□□□ -0.15
PTPRK-216ENST00000524481 CCDC158Q5M9N0 1113 aa14.13□□□□□ -0.15
PTPRK-216ENST00000524481 FAM208AQ9UK61 1670 aaKnown RBP14.13□□□□□ -0.15
PTPRK-216ENST00000524481 IL15P40933 162 aaPredicted RBP14.12□□□□□ -0.15
PTPRK-216ENST00000524481 AK2P54819 239 aa14.12□□□□□ -0.15
PTPRK-216ENST00000524481 LSG1Q9H089 658 aaKnown RBP14.12□□□□□ -0.15
PTPRK-216ENST00000524481 ANKRD18BA2A2Z9 1011 aa14.12□□□□□ -0.15
PTPRK-216ENST00000524481 ATG9AQ7Z3C6 839 aa14.12□□□□□ -0.15
PTPRK-216ENST00000524481 CCDC87Q9NVE4 849 aa14.12□□□□□ -0.15
PTPRK-216ENST00000524481 LRRC37A3O60309 1634 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 PHRF1Q9P1Y6 1649 aaKnown RBP14.11□□□□□ -0.15
PTPRK-216ENST00000524481 ZBTB38Q8NAP3 1195 aaPredicted RBP14.11□□□□□ -0.15
PTPRK-216ENST00000524481 PDRG1Q9NUG6 133 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 BRPF3Q9ULD4 1205 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 UTYO14607 1347 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 HSPA4P34932 840 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 CASP7P55210 303 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 SUSD4Q5VX71 490 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 XAGE2Q96GT9 111 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 PAG1Q9NWQ8 432 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 CYP46A1Q9Y6A2 500 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 LMO7Q8WWI1 1683 aa14.11□□□□□ -0.15
PTPRK-216ENST00000524481 PXDNLA1KZ92 1463 aa14.1□□□□□ -0.15
PTPRK-216ENST00000524481 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
PTPRK-216ENST00000524481 VPS53Q5VIR6 699 aa14.1□□□□□ -0.15
PTPRK-216ENST00000524481 RAB11FIP4Q86YS3 637 aa14.1□□□□□ -0.15
PTPRK-216ENST00000524481 XIRP1Q702N8 1843 aaKnown RBP14.1□□□□□ -0.15
PTPRK-216ENST00000524481 CREB3L3Q68CJ9 461 aa14.1□□□□□ -0.15
PTPRK-216ENST00000524481 ISCA1Q9BUE6 129 aa14.1□□□□□ -0.15
PTPRK-216ENST00000524481 RAD50Q92878 1312 aa14.09□□□□□ -0.15
PTPRK-216ENST00000524481 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-216ENST00000524481 SCARF1Q14162 830 aa14.09□□□□□ -0.15
PTPRK-216ENST00000524481 ATP2B3Q16720 1220 aa14.09□□□□□ -0.15
PTPRK-216ENST00000524481 RABL6Q3YEC7 729 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-216ENST00000524481 TTLL11Q8NHH1 800 aa14.09□□□□□ -0.15
PTPRK-216ENST00000524481 CCDC171Q6TFL3 1326 aa14.09□□□□□ -0.15
PTPRK-216ENST00000524481 ZAP70P43403 619 aa14.09□□□□□ -0.15
PTPRK-216ENST00000524481 FERMT3Q86UX7 667 aa14.09□□□□□ -0.15
PTPRK-216ENST00000524481 SRP68Q9UHB9 627 aaKnown RBP14.09□□□□□ -0.15
PTPRK-216ENST00000524481 JAG2Q9Y219 1238 aa14.09□□□□□ -0.15
PTPRK-216ENST00000524481 AK9Q5TCS8 1911 aa14.08□□□□□ -0.15
PTPRK-216ENST00000524481 SMC3Q9UQE7 1217 aa14.08□□□□□ -0.15
PTPRK-216ENST00000524481 ERBB4Q15303 1308 aa14.08□□□□□ -0.16
PTPRK-216ENST00000524481 COL18A1P39060 1754 aa14.08□□□□□ -0.16
PTPRK-216ENST00000524481 GNPATO15228 680 aa14.08□□□□□ -0.16
PTPRK-216ENST00000524481 ATP5JP18859 108 aa14.08□□□□□ -0.16
PTPRK-216ENST00000524481 BLOC1S2Q6QNY1 142 aa14.08□□□□□ -0.16
PTPRK-216ENST00000524481 A0A0G2JLW4 131 aa14.08□□□□□ -0.16
PTPRK-216ENST00000524481 BAG4O95429 457 aaKnown RBP14.08□□□□□ -0.16
PTPRK-216ENST00000524481 PCCAP05165 728 aaPredicted RBP14.08□□□□□ -0.16
PTPRK-216ENST00000524481 TTLL5Q6EMB2 1281 aa14.08□□□□□ -0.16
PTPRK-216ENST00000524481 TOMM22Q9NS69 142 aa14.08□□□□□ -0.16
PTPRK-216ENST00000524481 KDM3BQ7LBC6 1761 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 AOX1Q06278 1338 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-216ENST00000524481 WTIPA6NIX2 430 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-216ENST00000524481 RAB3GAP1Q15042 981 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 RNF20Q5VTR2 975 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 DDX11Q96FC9 970 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 CACNA1FO60840 1977 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 LARGE1O95461 756 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 CTSWP56202 376 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 NUCB2P80303 420 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 VSIG10Q8N0Z9 540 aa14.07□□□□□ -0.16
PTPRK-216ENST00000524481 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
PTPRK-216ENST00000524481 HIP1O00291 1037 aa14.06□□□□□ -0.16
PTPRK-216ENST00000524481 CAVIN1Q6NZI2 390 aaKnown RBP14.06□□□□□ -0.16
PTPRK-216ENST00000524481 UTP14AQ9BVJ6 771 aaKnown RBP14.06□□□□□ -0.16
PTPRK-216ENST00000524481 SPATA31A5Q5VU36 1347 aa14.06□□□□□ -0.16
PTPRK-216ENST00000524481 UBN2Q6ZU65 1347 aa14.06□□□□□ -0.16
PTPRK-216ENST00000524481 SPATA31A7Q8IWB4 1347 aa14.06□□□□□ -0.16
PTPRK-216ENST00000524481 SLC27A2O14975 620 aa14.06□□□□□ -0.16
PTPRK-216ENST00000524481 HSPA1LP34931 641 aa14.06□□□□□ -0.16
PTPRK-216ENST00000524481 IL6STP40189 918 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-216ENST00000524481 INTS5Q6P9B9 1019 aaKnown RBP14.06□□□□□ -0.16
PTPRK-216ENST00000524481 CHMP4CQ96CF2 233 aa14.06□□□□□ -0.16
PTPRK-216ENST00000524481 DDX11L8A8MPP1 907 aa14.06□□□□□ -0.16
PTPRK-216ENST00000524481 SH3TC1Q8TE82 1336 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 MCMDC2Q4G0Z9 681 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 RUFY3Q7L099 469 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 VPS37DQ86XT2 251 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 LIMCH1Q9UPQ0 1083 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 USPL1Q5W0Q7 1092 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 IL27Q8NEV9 243 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 CCNL1Q9UK58 526 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-216ENST00000524481 AKAP2Q9Y2D5 859 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 USP54Q70EL1 1684 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 BCL9O00512 1426 aa14.05□□□□□ -0.16
PTPRK-216ENST00000524481 PDE8AO60658 829 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 ZPR1O75312 459 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms