RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 NAA16Q6N069 864 aaPredicted RBP12.05□□□□□ -0.48
CTSC-203ENST00000524463 EVI5LQ96CN4 794 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 SSX2IPQ9Y2D8 614 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 ADGRL1O94910 1474 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 CETN1Q12798 172 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 NAPAP54920 295 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 NCOA7Q8NI08 942 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 PRDM10Q9NQV6 1147 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 EHBP1L1Q8N3D4 1523 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 GNPATO15228 680 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 YEATS4O95619 227 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 CCDC12Q8WUD4 166 aaPredicted RBP12.05□□□□□ -0.48
CTSC-203ENST00000524463 UBXN4Q92575 508 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 PAIP2Q9BPZ3 127 aaKnown RBP12.05□□□□□ -0.48
CTSC-203ENST00000524463 TROQ12816 1431 aaPredicted RBP12.05□□□□□ -0.48
CTSC-203ENST00000524463 FGFR1OPO95684 399 aaKnown RBP12.05□□□□□ -0.48
CTSC-203ENST00000524463 RNF187Q5TA31 235 aaPredicted RBP12.05□□□□□ -0.48
CTSC-203ENST00000524463 NBPF14Q5TI25 921 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 ZNF804AQ7Z570 1209 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 TRIM47Q96LD4 638 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 ZKSCAN3Q9BRR0 538 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 GINS2Q9Y248 185 aa12.05□□□□□ -0.48
CTSC-203ENST00000524463 RRAGBQ5VZM2 374 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 HECW1Q76N89 1606 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 NOS1P29475 1434 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 EAPPQ56P03 285 aaPredicted RBP12.04□□□□□ -0.48
CTSC-203ENST00000524463 SPECC1Q5M775 1068 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 APBB1IPQ7Z5R6 666 aaPredicted RBP12.04□□□□□ -0.48
CTSC-203ENST00000524463 CEP63Q96MT8 703 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 RTCBQ9Y3I0 505 aaKnown RBP12.04□□□□□ -0.48
CTSC-203ENST00000524463 TICAM2Q86XR7 235 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 TRERF1Q96PN7 1200 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 ATP2C2O75185 946 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 MARCKSP29966 332 aaPredicted RBP12.04□□□□□ -0.48
CTSC-203ENST00000524463 RBM25P49756 843 aaKnown RBP12.04□□□□□ -0.48
CTSC-203ENST00000524463 STAMBPO95630 424 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 TEX13AQ9BXU3 409 aaPredicted RBP12.04□□□□□ -0.48
CTSC-203ENST00000524463 JADE2Q9NQC1 790 aa12.04□□□□□ -0.48
CTSC-203ENST00000524463 STX6O43752 255 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 CSPG5O95196 566 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 HMGB1P09429 215 aaKnown RBP12.03□□□□□ -0.48
CTSC-203ENST00000524463 PTGS1P23219 599 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 MAGEB6Q8N7X4 407 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 NFATC2IPQ8NCF5 419 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 FAM107BQ9H098 131 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 ECHDC1Q9NTX5 307 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 AMPD3Q01432 767 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 MAATS1Q7Z4T9 603 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 SORBS3O60504 671 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 USO1O60763 962 aaKnown RBP12.03□□□□□ -0.48
CTSC-203ENST00000524463 STAT6P42226 847 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 LRSAM1Q6UWE0 723 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 LMBR1LQ6UX01 489 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 ZC3H12CQ9C0D7 883 aaKnown RBP12.03□□□□□ -0.48
CTSC-203ENST00000524463 LIMCH1Q9UPQ0 1083 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 EEF2P13639 858 aaKnown RBP12.03□□□□□ -0.48
CTSC-203ENST00000524463 TRIM27P14373 513 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 TNNI2P48788 182 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 MCM9Q9NXL9 1143 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
CTSC-203ENST00000524463 MCM4P33991 863 aa12.02□□□□□ -0.48
CTSC-203ENST00000524463 MSL1Q68DK7 614 aa12.02□□□□□ -0.48
CTSC-203ENST00000524463 CADPS2Q86UW7 1296 aa12.02□□□□□ -0.48
CTSC-203ENST00000524463 BRF1Q92994 677 aa12.02□□□□□ -0.48
CTSC-203ENST00000524463 C16orf45Q96MC5 204 aaPredicted RBP12.02□□□□□ -0.48
CTSC-203ENST00000524463 CHMP2AO43633 222 aa12.02□□□□□ -0.49
CTSC-203ENST00000524463 HMGB2P26583 209 aaKnown RBP12.02□□□□□ -0.49
CTSC-203ENST00000524463 CCDC183Q5T5S1 534 aa12.02□□□□□ -0.49
CTSC-203ENST00000524463 FAM135AQ9P2D6 1515 aa12.02□□□□□ -0.49
CTSC-203ENST00000524463 PPP1R14CQ8TAE6 165 aa12.02□□□□□ -0.49
CTSC-203ENST00000524463 CCDC66A2RUB6 948 aa12.02□□□□□ -0.49
CTSC-203ENST00000524463 BACH1O14867 736 aa12.01□□□□□ -0.49
CTSC-203ENST00000524463 STXBP4Q6ZWJ1 553 aa12.01□□□□□ -0.49
CTSC-203ENST00000524463 DDX17Q92841 729 aaKnown RBP12.01□□□□□ -0.49
CTSC-203ENST00000524463 TSNARE1Q96NA8 513 aa12.01□□□□□ -0.49
CTSC-203ENST00000524463 LMTK3Q96Q04 1460 aa12.01□□□□□ -0.49
CTSC-203ENST00000524463 TTC21AQ8NDW8 1320 aa12.01□□□□□ -0.49
CTSC-203ENST00000524463 BTG4Q9NY30 223 aa12.01□□□□□ -0.49
CTSC-203ENST00000524463 ALG1Q9BT22 464 aa12.01□□□□□ -0.49
CTSC-203ENST00000524463 GPCPD1Q9NPB8 672 aa12.01□□□□□ -0.49
CTSC-203ENST00000524463 NOD1Q9Y239 953 aa12.01□□□□□ -0.49
CTSC-203ENST00000524463 CBX1P83916 185 aa12□□□□□ -0.49
CTSC-203ENST00000524463 MAEAQ7L5Y9 396 aa12□□□□□ -0.49
CTSC-203ENST00000524463 CCDC50Q8IVM0 306 aa12□□□□□ -0.49
CTSC-203ENST00000524463 MCM7P33993 719 aa12□□□□□ -0.49
CTSC-203ENST00000524463 PAFAH1B1P43034 410 aa12□□□□□ -0.49
CTSC-203ENST00000524463 ZSCAN12O43309 604 aa12□□□□□ -0.49
CTSC-203ENST00000524463 RFX1P22670 979 aa12□□□□□ -0.49
CTSC-203ENST00000524463 RTN1Q16799 776 aa12□□□□□ -0.49
CTSC-203ENST00000524463 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
CTSC-203ENST00000524463 GCOM1H8Y6P7 765 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms