RNA–Protein interactions for RNA: ENST00000523851.1

SREK1-214, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 3

Gene SREK1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-214ENST00000523851 TNS4Q8IZW8 715 aa21.16■□□□□ 0.98
SREK1-214ENST00000523851 TMX4Q9H1E5 349 aaPredicted RBP21.16■□□□□ 0.98
SREK1-214ENST00000523851 LMOD1P29536 600 aaPredicted RBP21.15■□□□□ 0.98
SREK1-214ENST00000523851 AOC3Q16853 763 aa21.15■□□□□ 0.98
SREK1-214ENST00000523851 ANKRD13DQ6ZTN6 518 aa21.15■□□□□ 0.98
SREK1-214ENST00000523851 C8orf58Q8NAV2 365 aa21.15■□□□□ 0.98
SREK1-214ENST00000523851 PLBD2Q8NHP8 589 aa21.15■□□□□ 0.98
SREK1-214ENST00000523851 TAF1P21675 1872 aa21.15■□□□□ 0.98
SREK1-214ENST00000523851 SH3TC1Q8TE82 1336 aa21.14■□□□□ 0.97
SREK1-214ENST00000523851 VEGFBP49765 207 aa21.14■□□□□ 0.97
SREK1-214ENST00000523851 SUPT20HQ8NEM7 779 aa21.14■□□□□ 0.97
SREK1-214ENST00000523851 DDX46Q7L014 1031 aaKnown RBP21.13■□□□□ 0.97
SREK1-214ENST00000523851 DDX60Q8IY21 1712 aaKnown RBP21.12■□□□□ 0.97
SREK1-214ENST00000523851 ELL2O00472 640 aaPredicted RBP21.12■□□□□ 0.97
SREK1-214ENST00000523851 GRAPQ13588 217 aa21.12■□□□□ 0.97
SREK1-214ENST00000523851 DPP8Q6V1X1 898 aaPredicted RBP21.12■□□□□ 0.97
SREK1-214ENST00000523851 WDR63Q8IWG1 891 aa21.12■□□□□ 0.97
SREK1-214ENST00000523851 MPNDQ8N594 471 aa21.12■□□□□ 0.97
SREK1-214ENST00000523851 GRAPLQ8TC17 118 aaPredicted RBP21.12■□□□□ 0.97
SREK1-214ENST00000523851 ZNF428Q96B54 188 aa21.12■□□□□ 0.97
SREK1-214ENST00000523851 ISCA1Q9BUE6 129 aa21.12■□□□□ 0.97
SREK1-214ENST00000523851 ZNRF3Q9ULT6 936 aa21.12■□□□□ 0.97
SREK1-214ENST00000523851 CXCL9Q07325 125 aa21.11■□□□□ 0.97
SREK1-214ENST00000523851 USP50Q70EL3 339 aaPredicted RBP21.11■□□□□ 0.97
SREK1-214ENST00000523851 RASSF10A6NK89 507 aa21.1■□□□□ 0.97
SREK1-214ENST00000523851 TRIM28Q13263 835 aaKnown RBP21.1■□□□□ 0.97
SREK1-214ENST00000523851 DEFB115Q30KQ5 88 aa21.1■□□□□ 0.97
SREK1-214ENST00000523851 CCDC30Q5VVM6 783 aa21.1■□□□□ 0.97
SREK1-214ENST00000523851 ATP5J2-PTCD1G3V325 749 aa21.09■□□□□ 0.97
SREK1-214ENST00000523851 FOXN1O15353 648 aa21.09■□□□□ 0.97
SREK1-214ENST00000523851 FMR1Q06787 632 aaKnown RBP eCLIP21.09■□□□□ 0.97
SREK1-214ENST00000523851 KIAA2012Q0VF49 1180 aa21.09■□□□□ 0.97
SREK1-214ENST00000523851 FAM89AQ96GI7 184 aa21.09■□□□□ 0.97
SREK1-214ENST00000523851 GPRC5DQ9NZD1 345 aa21.09■□□□□ 0.97
SREK1-214ENST00000523851 TSPYL6Q8N831 410 aa21.08■□□□□ 0.97
SREK1-214ENST00000523851 TSR2Q969E8 191 aaKnown RBP21.08■□□□□ 0.97
SREK1-214ENST00000523851 ADARB2Q9NS39 739 aaKnown RBP21.08■□□□□ 0.97
SREK1-214ENST00000523851 LRRC37AA6NMS7 1700 aa21.07■□□□□ 0.96
SREK1-214ENST00000523851 CAPN15O75808 1086 aa21.07■□□□□ 0.96
SREK1-214ENST00000523851 SF3B3Q15393 1217 aaKnown RBP21.07■□□□□ 0.96
SREK1-214ENST00000523851 TMC4Q7Z404 712 aa21.07■□□□□ 0.96
SREK1-214ENST00000523851 FAM9BQ8IZU0 186 aa21.07■□□□□ 0.96
SREK1-214ENST00000523851 DUOX1Q9NRD9 1551 aa21.06■□□□□ 0.96
SREK1-214ENST00000523851 PHAXQ9H814 394 aaKnown RBP21.06■□□□□ 0.96
SREK1-214ENST00000523851 WBP1LQ9NX94 342 aa21.06■□□□□ 0.96
SREK1-214ENST00000523851 ABT1Q9ULW3 272 aaKnown RBP21.06■□□□□ 0.96
SREK1-214ENST00000523851 TRPM7Q96QT4 1865 aa21.05■□□□□ 0.96
SREK1-214ENST00000523851 GMPSP49915 693 aaPredicted RBP21.05■□□□□ 0.96
SREK1-214ENST00000523851 CST9Q5W186 159 aa21.05■□□□□ 0.96
SREK1-214ENST00000523851 CIAPIN1Q6FI81 312 aa21.05■□□□□ 0.96
SREK1-214ENST00000523851 CELF1Q92879 486 aaKnown RBP21.05■□□□□ 0.96
SREK1-214ENST00000523851 COL4A1P02462 1669 aa21.05■□□□□ 0.96
SREK1-214ENST00000523851 YDJCA8MPS7 323 aa21.04■□□□□ 0.96
SREK1-214ENST00000523851 TRAF5O00463 557 aa21.04■□□□□ 0.96
SREK1-214ENST00000523851 RAD17O75943 681 aa21.04■□□□□ 0.96
SREK1-214ENST00000523851 GOLGA2Q08379 1002 aa21.04■□□□□ 0.96
SREK1-214ENST00000523851 TWISTNBQ3B726 338 aaPredicted RBP21.04■□□□□ 0.96
SREK1-214ENST00000523851 WDR33Q9C0J8 1336 aaKnown RBP21.04■□□□□ 0.96
SREK1-214ENST00000523851 TNIP1Q15025 636 aa21.03■□□□□ 0.96
SREK1-214ENST00000523851 RTL5Q5HYW3 569 aaPredicted RBP21.03■□□□□ 0.96
SREK1-214ENST00000523851 RIC3Q7Z5B4 369 aa21.03■□□□□ 0.96
SREK1-214ENST00000523851 PRDM10Q9NQV6 1147 aa21.03■□□□□ 0.96
SREK1-214ENST00000523851 PGAP2Q9UHJ9 254 aa21.03■□□□□ 0.96
SREK1-214ENST00000523851 AIDAQ96BJ3 306 aa21.02■□□□□ 0.96
SREK1-214ENST00000523851 NSFL1CQ9UNZ2 370 aaKnown RBP21.02■□□□□ 0.96
SREK1-214ENST00000523851 SALL2Q9Y467 1007 aaPredicted RBP21.02■□□□□ 0.96
SREK1-214ENST00000523851 CDHR2Q9BYE9 1310 aa21.02■□□□□ 0.95
SREK1-214ENST00000523851 IRS4O14654 1257 aaPredicted RBP21.01■□□□□ 0.95
SREK1-214ENST00000523851 DDX58O95786 925 aaKnown RBP21.01■□□□□ 0.95
SREK1-214ENST00000523851 CTCFP49711 727 aaPredicted RBP21.01■□□□□ 0.95
SREK1-214ENST00000523851 HIRAP54198 1017 aaPredicted RBP21.01■□□□□ 0.95
SREK1-214ENST00000523851 WASHC4Q2M389 1173 aa21.01■□□□□ 0.95
SREK1-214ENST00000523851 BCL2L13Q9BXK5 485 aa21.01■□□□□ 0.95
SREK1-214ENST00000523851 FANCIQ9NVI1 1328 aa21.01■□□□□ 0.95
SREK1-214ENST00000523851 GPSM2P81274 684 aa21■□□□□ 0.95
SREK1-214ENST00000523851 ZBTB38Q8NAP3 1195 aaPredicted RBP21■□□□□ 0.95
SREK1-214ENST00000523851 STK31Q9BXU1 1019 aa21■□□□□ 0.95
SREK1-214ENST00000523851 POLLQ9UGP5 575 aa21■□□□□ 0.95
SREK1-214ENST00000523851 CNOT7Q9UIV1 285 aaKnown RBP21■□□□□ 0.95
SREK1-214ENST00000523851 VAMP4O75379 141 aa20.99■□□□□ 0.95
SREK1-214ENST00000523851 CCDC191Q8NCU4 936 aa20.99■□□□□ 0.95
SREK1-214ENST00000523851 ZC3H15Q8WU90 426 aaKnown RBP20.99■□□□□ 0.95
SREK1-214ENST00000523851 METTL22Q9BUU2 404 aaPredicted RBP20.99■□□□□ 0.95
SREK1-214ENST00000523851 TLL2Q9Y6L7 1015 aa20.99■□□□□ 0.95
SREK1-214ENST00000523851 SHTN1A0MZ66 631 aa20.98■□□□□ 0.95
SREK1-214ENST00000523851 LBX1P52954 281 aa20.98■□□□□ 0.95
SREK1-214ENST00000523851 RPS8P62241 208 aaKnown RBP20.98■□□□□ 0.95
SREK1-214ENST00000523851 MAP2K1Q02750 393 aaPredicted RBP20.98■□□□□ 0.95
SREK1-214ENST00000523851 KSR2Q6VAB6 950 aa20.98■□□□□ 0.95
SREK1-214ENST00000523851 CAPNS2Q96L46 248 aa20.98■□□□□ 0.95
SREK1-214ENST00000523851 MYD88Q99836 296 aa20.98■□□□□ 0.95
SREK1-214ENST00000523851 DBNDD1Q9H9R9 158 aa20.98■□□□□ 0.95
SREK1-214ENST00000523851 SPINK5Q9NQ38 1064 aaPredicted RBP20.98■□□□□ 0.95
SREK1-214ENST00000523851 ZNF521Q96K83 1311 aa20.98■□□□□ 0.95
SREK1-214ENST00000523851 THSD7BQ9C0I4 1608 aa20.97■□□□□ 0.95
SREK1-214ENST00000523851 C6orf229H3BNL8 230 aa20.97■□□□□ 0.95
SREK1-214ENST00000523851 RIMBP2O15034 1052 aa20.97■□□□□ 0.95
SREK1-214ENST00000523851 SLC4A2P04920 1241 aa20.97■□□□□ 0.95
SREK1-214ENST00000523851 CYP4F22Q6NT55 531 aa20.97■□□□□ 0.95
SREK1-214ENST00000523851 TRPM4Q8TD43 1214 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms