RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 RTL5Q5HYW3 569 aaPredicted RBP21.91■■□□□ 1.1
SQLE-205ENST00000521232 TMC4Q7Z404 712 aa21.91■■□□□ 1.1
SQLE-205ENST00000521232 PI4KAP1Q8N8J0 262 aa21.91■■□□□ 1.1
SQLE-205ENST00000521232 RTFDC1Q9BY42 306 aaPredicted RBP21.91■■□□□ 1.1
SQLE-205ENST00000521232 PCCAP05165 728 aaPredicted RBP21.9■■□□□ 1.1
SQLE-205ENST00000521232 HSP90B1P14625 803 aaKnown RBP21.9■■□□□ 1.1
SQLE-205ENST00000521232 G2E3Q7L622 706 aa21.9■■□□□ 1.1
SQLE-205ENST00000521232 SPINK5Q9NQ38 1064 aaPredicted RBP21.9■■□□□ 1.1
SQLE-205ENST00000521232 CWC25Q9NXE8 425 aaPredicted RBP21.9■■□□□ 1.1
SQLE-205ENST00000521232 IQCA1LA6NCM1 817 aa21.89■■□□□ 1.09
SQLE-205ENST00000521232 EXOSC9Q06265 439 aaKnown RBP21.89■■□□□ 1.09
SQLE-205ENST00000521232 LARGE2Q8N3Y3 721 aa21.89■■□□□ 1.09
SQLE-205ENST00000521232 SCN4AP35499 1836 aa21.89■■□□□ 1.09
SQLE-205ENST00000521232 MPNDQ8N594 471 aa21.88■■□□□ 1.09
SQLE-205ENST00000521232 SUPT20HQ8NEM7 779 aa21.88■■□□□ 1.09
SQLE-205ENST00000521232 COL4A5P29400 1685 aa21.88■■□□□ 1.09
SQLE-205ENST00000521232 IGKV5-2P06315 115 aa21.87■■□□□ 1.09
SQLE-205ENST00000521232 EIF6P56537 245 aaKnown RBP21.87■■□□□ 1.09
SQLE-205ENST00000521232 DPP8Q6V1X1 898 aaPredicted RBP21.87■■□□□ 1.09
SQLE-205ENST00000521232 GPC2Q8N158 579 aa21.87■■□□□ 1.09
SQLE-205ENST00000521232 CELF1Q92879 486 aaKnown RBP21.87■■□□□ 1.09
SQLE-205ENST00000521232 MYH16Q9H6N6 1097 aa21.87■■□□□ 1.09
SQLE-205ENST00000521232 PPIP5K2O43314 1243 aa21.86■■□□□ 1.09
SQLE-205ENST00000521232 TAF1DQ9H5J8 278 aaPredicted RBP21.86■■□□□ 1.09
SQLE-205ENST00000521232 ZNF521Q96K83 1311 aa21.85■■□□□ 1.09
SQLE-205ENST00000521232 PDE8AO60658 829 aa21.85■■□□□ 1.09
SQLE-205ENST00000521232 NEXNQ0ZGT2 675 aa21.85■■□□□ 1.09
SQLE-205ENST00000521232 FLIIQ13045 1269 aa21.85■■□□□ 1.09
SQLE-205ENST00000521232 AOC3Q16853 763 aa21.85■■□□□ 1.09
SQLE-205ENST00000521232 DNAJC5GQ8N7S2 189 aa21.85■■□□□ 1.09
SQLE-205ENST00000521232 RPS8P62241 208 aaKnown RBP21.84■■□□□ 1.09
SQLE-205ENST00000521232 NIM1KQ8IY84 436 aa21.84■■□□□ 1.09
SQLE-205ENST00000521232 JARID2Q92833 1246 aaPredicted RBP21.84■■□□□ 1.09
SQLE-205ENST00000521232 HACL1Q9UJ83 578 aa21.84■■□□□ 1.09
SQLE-205ENST00000521232 CDHR2Q9BYE9 1310 aa21.83■■□□□ 1.09
SQLE-205ENST00000521232 NEURL1BA8MQ27 555 aa21.83■■□□□ 1.09
SQLE-205ENST00000521232 CHADLQ6NUI6 762 aa21.83■■□□□ 1.09
SQLE-205ENST00000521232 LRRC37AA6NMS7 1700 aa21.83■■□□□ 1.08
SQLE-205ENST00000521232 POTEIP0CG38 1075 aa21.82■■□□□ 1.08
SQLE-205ENST00000521232 POTEJP0CG39 1038 aa21.82■■□□□ 1.08
SQLE-205ENST00000521232 KIAA2012Q0VF49 1180 aa21.82■■□□□ 1.08
SQLE-205ENST00000521232 CCDC152Q4G0S7 254 aa21.82■■□□□ 1.08
SQLE-205ENST00000521232 EPHX2P34913 555 aa21.81■■□□□ 1.08
SQLE-205ENST00000521232 FKBP5Q13451 457 aaPredicted RBP21.81■■□□□ 1.08
SQLE-205ENST00000521232 CWF19L2Q2TBE0 894 aaKnown RBP21.81■■□□□ 1.08
SQLE-205ENST00000521232 LDHDQ86WU2 507 aa21.81■■□□□ 1.08
SQLE-205ENST00000521232 SEC31BQ9NQW1 1179 aa21.81■■□□□ 1.08
SQLE-205ENST00000521232 ZNRF3Q9ULT6 936 aa21.81■■□□□ 1.08
SQLE-205ENST00000521232 NSFL1CQ9UNZ2 370 aaKnown RBP21.81■■□□□ 1.08
SQLE-205ENST00000521232 GJA3Q9Y6H8 435 aa21.81■■□□□ 1.08
SQLE-205ENST00000521232 COL4A1P02462 1669 aa21.81■■□□□ 1.08
SQLE-205ENST00000521232 H7C1W4 665 aa21.8■■□□□ 1.08
SQLE-205ENST00000521232 DNAAF4Q8WXU2 420 aa21.8■■□□□ 1.08
SQLE-205ENST00000521232 HTRA3P83110 453 aa21.79■■□□□ 1.08
SQLE-205ENST00000521232 PNMA8AQ86V59 439 aaPredicted RBP21.79■■□□□ 1.08
SQLE-205ENST00000521232 DUOX1Q9NRD9 1551 aa21.78■■□□□ 1.08
SQLE-205ENST00000521232 GPSM2P81274 684 aa21.78■■□□□ 1.08
SQLE-205ENST00000521232 CXCL9Q07325 125 aa21.78■■□□□ 1.08
SQLE-205ENST00000521232 GCKRQ14397 625 aa21.78■■□□□ 1.08
SQLE-205ENST00000521232 CCER2I3L3R5 266 aa21.77■■□□□ 1.08
SQLE-205ENST00000521232 SCNN1DP51172 638 aa21.77■■□□□ 1.08
SQLE-205ENST00000521232 CTSWP56202 376 aa21.77■■□□□ 1.08
SQLE-205ENST00000521232 WASHC4Q2M389 1173 aa21.77■■□□□ 1.08
SQLE-205ENST00000521232 EAPPQ56P03 285 aaPredicted RBP21.77■■□□□ 1.08
SQLE-205ENST00000521232 LINS1Q8NG48 757 aa21.77■■□□□ 1.08
SQLE-205ENST00000521232 TTLL11Q8NHH1 800 aa21.77■■□□□ 1.08
SQLE-205ENST00000521232 CCDC85AQ96PX6 553 aaPredicted RBP21.77■■□□□ 1.08
SQLE-205ENST00000521232 PODXL2Q9NZ53 605 aa21.77■■□□□ 1.08
SQLE-205ENST00000521232 POLLQ9UGP5 575 aa21.77■■□□□ 1.08
SQLE-205ENST00000521232 LMOD1P29536 600 aaPredicted RBP21.76■■□□□ 1.07
SQLE-205ENST00000521232 MYH3P11055 1940 aa21.76■■□□□ 1.07
SQLE-205ENST00000521232 PCNTO95613 3336 aa21.75■■□□□ 1.07
SQLE-205ENST00000521232 C6orf229H3BNL8 230 aa21.75■■□□□ 1.07
SQLE-205ENST00000521232 UBE3BQ7Z3V4 1068 aa21.75■■□□□ 1.07
SQLE-205ENST00000521232 TBC1D16Q8TBP0 767 aa21.75■■□□□ 1.07
SQLE-205ENST00000521232 PLA2G12BQ9BX93 195 aa21.75■■□□□ 1.07
SQLE-205ENST00000521232 LTBP1Q14766 1721 aa21.75■■□□□ 1.07
SQLE-205ENST00000521232 ADAMTSL1Q8N6G6 1762 aa21.74■■□□□ 1.07
SQLE-205ENST00000521232 EPS15P42566 896 aa21.74■■□□□ 1.07
SQLE-205ENST00000521232 CASP7P55210 303 aa21.74■■□□□ 1.07
SQLE-205ENST00000521232 CIAPIN1Q6FI81 312 aa21.74■■□□□ 1.07
SQLE-205ENST00000521232 ANKRD18AQ8IVF6 992 aa21.74■■□□□ 1.07
SQLE-205ENST00000521232 KLRG1Q96E93 195 aa21.74■■□□□ 1.07
SQLE-205ENST00000521232 EYA3Q99504 573 aa21.74■■□□□ 1.07
SQLE-205ENST00000521232 CLEC11AQ9Y240 323 aa21.74■■□□□ 1.07
SQLE-205ENST00000521232 YDJCA8MPS7 323 aa21.73■■□□□ 1.07
SQLE-205ENST00000521232 E9PSI1 815 aa21.73■■□□□ 1.07
SQLE-205ENST00000521232 ITGBL1O95965 494 aaPredicted RBP21.73■■□□□ 1.07
SQLE-205ENST00000521232 TNIP1Q15025 636 aa21.73■■□□□ 1.07
SQLE-205ENST00000521232 CDC5LQ99459 802 aaKnown RBP21.73■■□□□ 1.07
SQLE-205ENST00000521232 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
SQLE-205ENST00000521232 RTL9Q8NET4 1388 aa21.73■■□□□ 1.07
SQLE-205ENST00000521232 F6X3S4 739 aa21.72■■□□□ 1.07
SQLE-205ENST00000521232 RIMBP2O15034 1052 aa21.72■■□□□ 1.07
SQLE-205ENST00000521232 BEND3Q5T5X7 828 aa21.72■■□□□ 1.07
SQLE-205ENST00000521232 GREM2Q9H772 168 aa21.72■■□□□ 1.07
SQLE-205ENST00000521232 GPRC5DQ9NZD1 345 aa21.72■■□□□ 1.07
SQLE-205ENST00000521232 RAD17O75943 681 aa21.71■■□□□ 1.07
SQLE-205ENST00000521232 CSF1RP07333 972 aa21.71■■□□□ 1.07
SQLE-205ENST00000521232 SLFN5Q08AF3 891 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms