RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 ZNF622Q969S3 477 aaKnown RBP eCLIP9.86□□□□□ -0.834e-6■□□□□ 8.1
CLK4-203ENST00000519583 SRCIN1Q9C0H9 1055 aa9.86□□□□□ -0.83
CLK4-203ENST00000519583 USP44Q9H0E7 712 aa9.86□□□□□ -0.83
CLK4-203ENST00000519583 TRIM28Q13263 835 aaKnown RBP9.86□□□□□ -0.83
CLK4-203ENST00000519583 SYNE4Q8N205 404 aa9.86□□□□□ -0.83
CLK4-203ENST00000519583 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
CLK4-203ENST00000519583 BCS1LQ9Y276 419 aa9.86□□□□□ -0.83
CLK4-203ENST00000519583 LRRFIP2Q9Y608 721 aaKnown RBP9.86□□□□□ -0.83
CLK4-203ENST00000519583 KCNA3P22001 575 aa9.86□□□□□ -0.83
CLK4-203ENST00000519583 CWF19L2Q2TBE0 894 aaKnown RBP9.86□□□□□ -0.83
CLK4-203ENST00000519583 FAM89AQ96GI7 184 aa9.86□□□□□ -0.83
CLK4-203ENST00000519583 CWC25Q9NXE8 425 aaPredicted RBP9.86□□□□□ -0.83
CLK4-203ENST00000519583 PIM2Q9P1W9 311 aa9.86□□□□□ -0.83
CLK4-203ENST00000519583 SH3TC1Q8TE82 1336 aa9.85□□□□□ -0.83
CLK4-203ENST00000519583 UBTFL1P0CB47 393 aaPredicted RBP9.85□□□□□ -0.83
CLK4-203ENST00000519583 HCLS1P14317 486 aaPredicted RBP9.85□□□□□ -0.83
CLK4-203ENST00000519583 BEND3Q5T5X7 828 aa9.85□□□□□ -0.83
CLK4-203ENST00000519583 CCDC191Q8NCU4 936 aa9.85□□□□□ -0.83
CLK4-203ENST00000519583 SMARCA5O60264 1052 aaPredicted RBP9.85□□□□□ -0.83
CLK4-203ENST00000519583 IGKV5-2P06315 115 aa9.85□□□□□ -0.83
CLK4-203ENST00000519583 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLK4-203ENST00000519583 JARID2Q92833 1246 aaPredicted RBP9.85□□□□□ -0.83
CLK4-203ENST00000519583 ANKRD31Q8N7Z5 1873 aa9.85□□□□□ -0.83
CLK4-203ENST00000519583 ANP32EQ9BTT0 268 aa9.84□□□□□ -0.83
CLK4-203ENST00000519583 KIAA1551Q9HCM1 1747 aa9.84□□□□□ -0.83
CLK4-203ENST00000519583 PNMA6EA0A0J9YXQ4 647 aa9.84□□□□□ -0.83
CLK4-203ENST00000519583 NEURL1BA8MQ27 555 aa9.84□□□□□ -0.83
CLK4-203ENST00000519583 DALRD3Q5D0E6 543 aaKnown RBP9.84□□□□□ -0.83
CLK4-203ENST00000519583 BMP2KLQ5H9B9 411 aa9.84□□□□□ -0.83
CLK4-203ENST00000519583 C16orf71Q8IYS4 520 aaPredicted RBP9.84□□□□□ -0.83
CLK4-203ENST00000519583 NLRP3Q96P20 1036 aa9.84□□□□□ -0.83
CLK4-203ENST00000519583 SRGNP10124 158 aa9.84□□□□□ -0.83
CLK4-203ENST00000519583 OTUD7AQ8TE49 926 aaPredicted RBP9.84□□□□□ -0.83
CLK4-203ENST00000519583 UPF2Q9HAU5 1272 aaKnown RBP9.84□□□□□ -0.83
CLK4-203ENST00000519583 ATP8B2P98198 1209 aa9.83□□□□□ -0.84
CLK4-203ENST00000519583 SLC10A5Q5PT55 438 aa9.83□□□□□ -0.84
CLK4-203ENST00000519583 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
CLK4-203ENST00000519583 TTLL6Q8N841 843 aa9.83□□□□□ -0.84
CLK4-203ENST00000519583 ZBTB38Q8NAP3 1195 aaPredicted RBP9.83□□□□□ -0.84
CLK4-203ENST00000519583 LINS1Q8NG48 757 aa9.83□□□□□ -0.84
CLK4-203ENST00000519583 MASTLQ96GX5 879 aa9.83□□□□□ -0.84
CLK4-203ENST00000519583 EXOC6BQ9Y2D4 811 aa9.83□□□□□ -0.84
CLK4-203ENST00000519583 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
CLK4-203ENST00000519583 IRS4O14654 1257 aaPredicted RBP9.83□□□□□ -0.84
CLK4-203ENST00000519583 PCCAP05165 728 aaPredicted RBP9.83□□□□□ -0.84
CLK4-203ENST00000519583 NBPF7P0C2Y1 421 aaPredicted RBP9.83□□□□□ -0.84
CLK4-203ENST00000519583 NPR1P16066 1061 aa9.83□□□□□ -0.84
CLK4-203ENST00000519583 MFAP1P55081 439 aaKnown RBP9.83□□□□□ -0.84
CLK4-203ENST00000519583 RPGRQ92834 1020 aaKnown RBP9.83□□□□□ -0.84
CLK4-203ENST00000519583 TNRC6CQ9HCJ0 1690 aaKnown RBP9.82□□□□□ -0.84
CLK4-203ENST00000519583 KLRG2A4D1S0 409 aaPredicted RBP9.82□□□□□ -0.84
CLK4-203ENST00000519583 STYK1Q6J9G0 422 aa9.82□□□□□ -0.84
CLK4-203ENST00000519583 CNKSR1Q969H4 720 aa9.82□□□□□ -0.84
CLK4-203ENST00000519583 ZNF219Q9P2Y4 722 aaPredicted RBP9.82□□□□□ -0.84
CLK4-203ENST00000519583 COL11A2P13942 1736 aaPredicted RBP9.82□□□□□ -0.84
CLK4-203ENST00000519583 GRIN3BO60391 1043 aa9.82□□□□□ -0.84
CLK4-203ENST00000519583 SLC4A3P48751 1232 aa9.82□□□□□ -0.84
CLK4-203ENST00000519583 GCKRQ14397 625 aa9.82□□□□□ -0.84
CLK4-203ENST00000519583 TBC1D32Q96NH3 1257 aa9.82□□□□□ -0.84
CLK4-203ENST00000519583 RIC1Q4ADV7 1423 aa9.82□□□□□ -0.84
CLK4-203ENST00000519583 GSPT1P15170 499 aaKnown RBP9.81□□□□□ -0.84
CLK4-203ENST00000519583 UBE3BQ7Z3V4 1068 aa9.81□□□□□ -0.84
CLK4-203ENST00000519583 CRY2Q49AN0 593 aa9.81□□□□□ -0.84
CLK4-203ENST00000519583 ALDH1L1O75891 902 aa9.81□□□□□ -0.84
CLK4-203ENST00000519583 HSP90B1P14625 803 aaKnown RBP9.81□□□□□ -0.84
CLK4-203ENST00000519583 PRPF40BQ6NWY9 871 aaKnown RBP9.81□□□□□ -0.84
CLK4-203ENST00000519583 RBM17Q96I25 401 aaKnown RBP9.81□□□□□ -0.84
CLK4-203ENST00000519583 TTC22Q5TAA0 569 aa9.8□□□□□ -0.84
CLK4-203ENST00000519583 GOLGB1Q14789 3259 aaKnown RBP9.8□□□□□ -0.84
CLK4-203ENST00000519583 BRCA1P38398 1863 aaKnown RBP9.8□□□□□ -0.84
CLK4-203ENST00000519583 H7C1W4 665 aa9.8□□□□□ -0.84
CLK4-203ENST00000519583 ALDH1B1P30837 517 aa9.8□□□□□ -0.84
CLK4-203ENST00000519583 ARHGAP27Q6ZUM4 889 aa9.8□□□□□ -0.84
CLK4-203ENST00000519583 C9orf78Q9NZ63 289 aaPredicted RBP9.8□□□□□ -0.84
CLK4-203ENST00000519583 DLEC1Q9Y238 1755 aa9.8□□□□□ -0.84
CLK4-203ENST00000519583 C21orf2O43822 256 aa9.8□□□□□ -0.84
CLK4-203ENST00000519583 SSH3Q8TE77 659 aa9.8□□□□□ -0.84
CLK4-203ENST00000519583 CCDC85AQ96PX6 553 aaPredicted RBP9.8□□□□□ -0.84
CLK4-203ENST00000519583 CDHR2Q9BYE9 1310 aa9.79□□□□□ -0.84
CLK4-203ENST00000519583 PDE8AO60658 829 aa9.79□□□□□ -0.84
CLK4-203ENST00000519583 HOXA10P31260 410 aaPredicted RBP9.79□□□□□ -0.84
CLK4-203ENST00000519583 DDX46Q7L014 1031 aaKnown RBP9.79□□□□□ -0.84
CLK4-203ENST00000519583 LRRCC1Q9C099 1032 aa9.79□□□□□ -0.84
CLK4-203ENST00000519583 DAXXQ9UER7 740 aaPredicted RBP9.79□□□□□ -0.84
CLK4-203ENST00000519583 SRGAP3O43295 1099 aa9.79□□□□□ -0.84
CLK4-203ENST00000519583 POLA2Q14181 598 aa9.79□□□□□ -0.84
CLK4-203ENST00000519583 TBC1D9Q6ZT07 1266 aa9.79□□□□□ -0.84
CLK4-203ENST00000519583 C22orf23Q9BZE7 217 aa9.79□□□□□ -0.84
CLK4-203ENST00000519583 GRM8O00222 908 aa9.79□□□□□ -0.84
CLK4-203ENST00000519583 CRAMP1Q96RY5 1269 aa9.79□□□□□ -0.84
CLK4-203ENST00000519583 DDX60Q8IY21 1712 aaKnown RBP9.78□□□□□ -0.84
CLK4-203ENST00000519583 SF3B3Q15393 1217 aaKnown RBP9.78□□□□□ -0.84
CLK4-203ENST00000519583 CACNA1SQ13698 1873 aa9.78□□□□□ -0.84
CLK4-203ENST00000519583 CDC45O75419 566 aa9.78□□□□□ -0.84
CLK4-203ENST00000519583 SURF6O75683 361 aaKnown RBP9.78□□□□□ -0.84
CLK4-203ENST00000519583 CASP7P55210 303 aa9.78□□□□□ -0.84
CLK4-203ENST00000519583 SLX4Q8IY92 1834 aa9.78□□□□□ -0.84
CLK4-203ENST00000519583 UTRNP46939 3433 aa9.78□□□□□ -0.84
CLK4-203ENST00000519583 CTSWP56202 376 aa9.77□□□□□ -0.84
CLK4-203ENST00000519583 CCDC152Q4G0S7 254 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms