RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
RACK1-234ENST00000515417 BEND3Q5T5X7 828 aa12.36□□□□□ -0.43
RACK1-234ENST00000515417 DDX46Q7L014 1031 aaKnown RBP12.36□□□□□ -0.43
RACK1-234ENST00000515417 LINS1Q8NG48 757 aa12.36□□□□□ -0.43
RACK1-234ENST00000515417 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
RACK1-234ENST00000515417 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
RACK1-234ENST00000515417 POTECB2RU33 542 aa12.35□□□□□ -0.43
RACK1-234ENST00000515417 RARSP54136 660 aaKnown RBP12.35□□□□□ -0.43
RACK1-234ENST00000515417 TNS4Q8IZW8 715 aa12.35□□□□□ -0.43
RACK1-234ENST00000515417 CELF1Q92879 486 aaKnown RBP12.35□□□□□ -0.43
RACK1-234ENST00000515417 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
RACK1-234ENST00000515417 SEC31BQ9NQW1 1179 aa12.35□□□□□ -0.43
RACK1-234ENST00000515417 ZNF277Q9NRM2 450 aaPredicted RBP12.35□□□□□ -0.43
RACK1-234ENST00000515417 LAMB2P55268 1798 aa12.35□□□□□ -0.43
RACK1-234ENST00000515417 H7C1W4 665 aa12.34□□□□□ -0.43
RACK1-234ENST00000515417 LMNB1P20700 586 aa12.34□□□□□ -0.43
RACK1-234ENST00000515417 CASP7P55210 303 aa12.34□□□□□ -0.43
RACK1-234ENST00000515417 FSTL1Q12841 308 aa12.34□□□□□ -0.43
RACK1-234ENST00000515417 GRAPQ13588 217 aa12.34□□□□□ -0.43
RACK1-234ENST00000515417 SF3B3Q15393 1217 aaKnown RBP12.34□□□□□ -0.43
RACK1-234ENST00000515417 ALDH1L2Q3SY69 923 aa12.34□□□□□ -0.43
RACK1-234ENST00000515417 GRAPLQ8TC17 118 aaPredicted RBP12.34□□□□□ -0.43
RACK1-234ENST00000515417 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
RACK1-234ENST00000515417 CDHR2Q9BYE9 1310 aa12.34□□□□□ -0.43
RACK1-234ENST00000515417 PDE8AO60658 829 aa12.33□□□□□ -0.44
RACK1-234ENST00000515417 CT47B1P0C2W7 299 aaPredicted RBP12.33□□□□□ -0.44
RACK1-234ENST00000515417 CTSWP56202 376 aa12.33□□□□□ -0.44
RACK1-234ENST00000515417 SOGA3Q5TF21 947 aa12.33□□□□□ -0.44
RACK1-234ENST00000515417 NOB1Q9ULX3 412 aaKnown RBP12.33□□□□□ -0.44
RACK1-234ENST00000515417 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 BCAR3O75815 825 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 HSPA1AP0DMV8 641 aaKnown RBP12.32□□□□□ -0.44
RACK1-234ENST00000515417 HSPA1BP0DMV9 641 aaKnown RBP12.32□□□□□ -0.44
RACK1-234ENST00000515417 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
RACK1-234ENST00000515417 CCDC152Q4G0S7 254 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 SRCIN1Q9C0H9 1055 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 GREM2Q9H772 168 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 TNNQ9UQP3 1299 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 ATP6V0A2Q9Y487 856 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 PTPRCP08575 1304 aa12.32□□□□□ -0.44
RACK1-234ENST00000515417 TAF1P21675 1872 aa12.31□□□□□ -0.44
RACK1-234ENST00000515417 CCDC88AQ3V6T2 1871 aa12.31□□□□□ -0.44
RACK1-234ENST00000515417 ALDH1L1O75891 902 aa12.31□□□□□ -0.44
RACK1-234ENST00000515417 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
RACK1-234ENST00000515417 EPHA10Q5JZY3 1008 aa12.31□□□□□ -0.44
RACK1-234ENST00000515417 RTKN2Q8IZC4 609 aa12.31□□□□□ -0.44
RACK1-234ENST00000515417 SMC1BQ8NDV3 1235 aa12.31□□□□□ -0.44
RACK1-234ENST00000515417 TTLL11Q8NHH1 800 aa12.31□□□□□ -0.44
RACK1-234ENST00000515417 YTHDC1Q96MU7 727 aaKnown RBP12.31□□□□□ -0.44
RACK1-234ENST00000515417 LTBP3Q9NS15 1303 aa12.31□□□□□ -0.44
RACK1-234ENST00000515417 CACNA1FO60840 1977 aa12.3□□□□□ -0.44
RACK1-234ENST00000515417 FER1L6Q2WGJ9 1857 aa12.3□□□□□ -0.44
RACK1-234ENST00000515417 GLTPD2A6NH11 291 aa12.3□□□□□ -0.44
RACK1-234ENST00000515417 GRM8O00222 908 aa12.3□□□□□ -0.44
RACK1-234ENST00000515417 BBOX1O75936 387 aa12.3□□□□□ -0.44
RACK1-234ENST00000515417 HSP90B1P14625 803 aaKnown RBP12.3□□□□□ -0.44
RACK1-234ENST00000515417 FRAT1Q92837 279 aaPredicted RBP12.3□□□□□ -0.44
RACK1-234ENST00000515417 C9orf78Q9NZ63 289 aaPredicted RBP12.3□□□□□ -0.44
RACK1-234ENST00000515417 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
RACK1-234ENST00000515417 SP8Q8IXZ3 490 aa12.29□□□□□ -0.44
RACK1-234ENST00000515417 SUCLG2Q96I99 432 aa12.29□□□□□ -0.44
RACK1-234ENST00000515417 GPR101Q96P66 508 aaPredicted RBP12.29□□□□□ -0.44
RACK1-234ENST00000515417 PLA2G12BQ9BX93 195 aa12.29□□□□□ -0.44
RACK1-234ENST00000515417 CHMP3Q9Y3E7 222 aa12.29□□□□□ -0.44
RACK1-234ENST00000515417 COL4A5P29400 1685 aa12.29□□□□□ -0.44
RACK1-234ENST00000515417 NBPF7P0C2Y1 421 aaPredicted RBP12.28□□□□□ -0.44
RACK1-234ENST00000515417 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
RACK1-234ENST00000515417 IARSP41252 1262 aaKnown RBP12.28□□□□□ -0.44
RACK1-234ENST00000515417 GPSM2P81274 684 aa12.28□□□□□ -0.44
RACK1-234ENST00000515417 FOXO4P98177 505 aa12.28□□□□□ -0.44
RACK1-234ENST00000515417 CC2D2BQ6DHV5 1058 aa12.28□□□□□ -0.44
RACK1-234ENST00000515417 DPP8Q6V1X1 898 aaPredicted RBP12.28□□□□□ -0.44
RACK1-234ENST00000515417 PSMD1Q99460 953 aa12.28□□□□□ -0.44
RACK1-234ENST00000515417 MKRN1Q9UHC7 482 aaKnown RBP12.28□□□□□ -0.44
RACK1-234ENST00000515417 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
RACK1-234ENST00000515417 PPIP5K2O43314 1243 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 ITGA6P23229 1130 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 BRPF1P55201 1214 aaPredicted RBP12.27□□□□□ -0.45
RACK1-234ENST00000515417 AOC3Q16853 763 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 LMBR1LQ6UX01 489 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 ANKRD18AQ8IVF6 992 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 LARGE2Q8N3Y3 721 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 MPNDQ8N594 471 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.45
RACK1-234ENST00000515417 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
RACK1-234ENST00000515417 TIAM2Q8IVF5 1701 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 KIF16BQ96L93 1317 aa12.27□□□□□ -0.45
RACK1-234ENST00000515417 WTIPA6NIX2 430 aaPredicted RBP12.26□□□□□ -0.45
RACK1-234ENST00000515417 CSF1RP07333 972 aa12.26□□□□□ -0.45
RACK1-234ENST00000515417 TRIM27P14373 513 aa12.26□□□□□ -0.45
RACK1-234ENST00000515417 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
RACK1-234ENST00000515417 CDC5LQ99459 802 aaKnown RBP12.26□□□□□ -0.45
RACK1-234ENST00000515417 USP44Q9H0E7 712 aa12.26□□□□□ -0.45
RACK1-234ENST00000515417 NSFL1CQ9UNZ2 370 aaKnown RBP12.26□□□□□ -0.45
RACK1-234ENST00000515417 RTL9Q8NET4 1388 aa12.26□□□□□ -0.45
RACK1-234ENST00000515417 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
RACK1-234ENST00000515417 C6orf229H3BNL8 230 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms