RNA–Protein interactions for RNA: ENST00000514951.5

SMN1-209, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2 BASIC

Gene SMN1, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-209ENST00000514951 HOXA10P31260 410 aaPredicted RBP24.16■■□□□ 1.46
SMN1-209ENST00000514951 SF3B3Q15393 1217 aaKnown RBP24.16■■□□□ 1.46
SMN1-209ENST00000514951 ZNF622Q969S3 477 aaKnown RBP eCLIP24.16■■□□□ 1.46
SMN1-209ENST00000514951 PLA2G12BQ9BX93 195 aa24.16■■□□□ 1.46
SMN1-209ENST00000514951 SLX4Q8IY92 1834 aa24.16■■□□□ 1.46
SMN1-209ENST00000514951 TAF1P21675 1872 aa24.16■■□□□ 1.46
SMN1-209ENST00000514951 ARFGEF1Q9Y6D6 1849 aa24.15■■□□□ 1.46
SMN1-209ENST00000514951 FTSJ3Q8IY81 847 aaKnown RBP24.15■■□□□ 1.46
SMN1-209ENST00000514951 PANK1Q8TE04 598 aa24.14■■□□□ 1.46
SMN1-209ENST00000514951 RPGRQ92834 1020 aaKnown RBP24.14■■□□□ 1.46
SMN1-209ENST00000514951 COL4A1P02462 1669 aa24.14■■□□□ 1.46
SMN1-209ENST00000514951 CTSWP56202 376 aa24.13■■□□□ 1.45
SMN1-209ENST00000514951 DALRD3Q5D0E6 543 aaKnown RBP24.13■■□□□ 1.45
SMN1-209ENST00000514951 TTLL6Q8N841 843 aa24.13■■□□□ 1.45
SMN1-209ENST00000514951 KAZALD1Q96I82 304 aa24.13■■□□□ 1.45
SMN1-209ENST00000514951 FOXO4P98177 505 aa24.12■■□□□ 1.45
SMN1-209ENST00000514951 EPHA10Q5JZY3 1008 aa24.12■■□□□ 1.45
SMN1-209ENST00000514951 TTLL11Q8NHH1 800 aa24.12■■□□□ 1.45
SMN1-209ENST00000514951 CNKSR1Q969H4 720 aa24.12■■□□□ 1.45
SMN1-209ENST00000514951 SUCLG2Q96I99 432 aa24.12■■□□□ 1.45
SMN1-209ENST00000514951 MEIS3Q99687 375 aa24.12■■□□□ 1.45
SMN1-209ENST00000514951 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.11■■□□□ 1.45
SMN1-209ENST00000514951 RBM17Q96I25 401 aaKnown RBP24.11■■□□□ 1.45
SMN1-209ENST00000514951 CRAMP1Q96RY5 1269 aa24.11■■□□□ 1.45
SMN1-209ENST00000514951 C20orf194Q5TEA3 1177 aa24.1■■□□□ 1.45
SMN1-209ENST00000514951 PRPF40BQ6NWY9 871 aaKnown RBP24.1■■□□□ 1.45
SMN1-209ENST00000514951 CCDC85AQ96PX6 553 aaPredicted RBP24.1■■□□□ 1.45
SMN1-209ENST00000514951 CSF1RP07333 972 aa24.1■■□□□ 1.45
SMN1-209ENST00000514951 MS4A1P11836 297 aa24.1■■□□□ 1.45
SMN1-209ENST00000514951 ALDH1B1P30837 517 aa24.1■■□□□ 1.45
SMN1-209ENST00000514951 RRP1P56182 461 aaKnown RBP24.1■■□□□ 1.45
SMN1-209ENST00000514951 CCDC152Q4G0S7 254 aa24.1■■□□□ 1.45
SMN1-209ENST00000514951 DDX46Q7L014 1031 aaKnown RBP24.09■■□□□ 1.45
SMN1-209ENST00000514951 ITPRIPQ8IWB1 547 aa24.09■■□□□ 1.45
SMN1-209ENST00000514951 SEC31BQ9NQW1 1179 aa24.09■■□□□ 1.45
SMN1-209ENST00000514951 RTL9Q8NET4 1388 aa24.08■■□□□ 1.45
SMN1-209ENST00000514951 UBTFL1P0CB47 393 aaPredicted RBP24.08■■□□□ 1.44
SMN1-209ENST00000514951 PDE3AQ14432 1141 aa24.08■■□□□ 1.44
SMN1-209ENST00000514951 BICC1Q9H694 974 aaKnown RBP24.08■■□□□ 1.44
SMN1-209ENST00000514951 GREM2Q9H772 168 aa24.08■■□□□ 1.44
SMN1-209ENST00000514951 GRAPQ13588 217 aa24.07■■□□□ 1.44
SMN1-209ENST00000514951 FAM161AQ3B820 660 aa24.07■■□□□ 1.44
SMN1-209ENST00000514951 ANKRD44Q8N8A2 993 aa24.07■■□□□ 1.44
SMN1-209ENST00000514951 GRAPLQ8TC17 118 aaPredicted RBP24.07■■□□□ 1.44
SMN1-209ENST00000514951 C7orf43Q8WVR3 580 aa24.07■■□□□ 1.44
SMN1-209ENST00000514951 CELF1Q92879 486 aaKnown RBP24.07■■□□□ 1.44
SMN1-209ENST00000514951 GNAI3P08754 354 aa24.06■■□□□ 1.44
SMN1-209ENST00000514951 RABL6Q3YEC7 729 aaPredicted RBP24.06■■□□□ 1.44
SMN1-209ENST00000514951 LMBR1LQ6UX01 489 aa24.06■■□□□ 1.44
SMN1-209ENST00000514951 SLC51AQ86UW1 340 aa24.06■■□□□ 1.44
SMN1-209ENST00000514951 ZBTB7BO15156 539 aaPredicted RBP24.05■■□□□ 1.44
SMN1-209ENST00000514951 MVPQ14764 893 aaKnown RBP24.05■■□□□ 1.44
SMN1-209ENST00000514951 SPEF2Q9C093 1822 aa24.05■■□□□ 1.44
SMN1-209ENST00000514951 COG6Q9Y2V7 657 aa24.05■■□□□ 1.44
SMN1-209ENST00000514951 LRRFIP2Q9Y608 721 aaKnown RBP24.05■■□□□ 1.44
SMN1-209ENST00000514951 C21orf2O43822 256 aa24.04■■□□□ 1.44
SMN1-209ENST00000514951 C9orf131Q5VYM1 1079 aa24.04■■□□□ 1.44
SMN1-209ENST00000514951 ZNF219Q9P2Y4 722 aaPredicted RBP24.04■■□□□ 1.44
SMN1-209ENST00000514951 LRRC37AA6NMS7 1700 aa24.03■■□□□ 1.44
SMN1-209ENST00000514951 PPEF1O14829 653 aaPredicted RBP24.03■■□□□ 1.44
SMN1-209ENST00000514951 BBOX1O75936 387 aa24.03■■□□□ 1.44
SMN1-209ENST00000514951 OLFM4Q6UX06 510 aa24.03■■□□□ 1.44
SMN1-209ENST00000514951 FER1L6Q2WGJ9 1857 aa24.02■■□□□ 1.44
SMN1-209ENST00000514951 ITGA6P23229 1130 aa24.02■■□□□ 1.44
SMN1-209ENST00000514951 SNED1Q8TER0 1413 aa24.01■■□□□ 1.43
SMN1-209ENST00000514951 RPS8P62241 208 aaKnown RBP24.01■■□□□ 1.43
SMN1-209ENST00000514951 RNF181Q9P0P0 153 aa24.01■■□□□ 1.43
SMN1-209ENST00000514951 CHMP3Q9Y3E7 222 aa24.01■■□□□ 1.43
SMN1-209ENST00000514951 CDC5LQ99459 802 aaKnown RBP24■■□□□ 1.43
SMN1-209ENST00000514951 DDX19BQ9UMR2 479 aa24■■□□□ 1.43
SMN1-209ENST00000514951 HDAC5Q9UQL6 1122 aa24■■□□□ 1.43
SMN1-209ENST00000514951 ATP6V0A2Q9Y487 856 aa24■■□□□ 1.43
SMN1-209ENST00000514951 SUPT16HQ9Y5B9 1047 aaKnown RBP24■■□□□ 1.43
SMN1-209ENST00000514951 GNAI2P04899 355 aa23.99■■□□□ 1.43
SMN1-209ENST00000514951 RASSF7Q02833 373 aa23.99■■□□□ 1.43
SMN1-209ENST00000514951 IFIT5Q13325 482 aaKnown RBP23.99■■□□□ 1.43
SMN1-209ENST00000514951 ANKRD18BA2A2Z9 1011 aa23.98■■□□□ 1.43
SMN1-209ENST00000514951 TMC4Q7Z404 712 aa23.98■■□□□ 1.43
SMN1-209ENST00000514951 ANKRD18AQ8IVF6 992 aa23.98■■□□□ 1.43
SMN1-209ENST00000514951 SP8Q8IXZ3 490 aa23.98■■□□□ 1.43
SMN1-209ENST00000514951 CCDC57Q2TAC2 916 aa23.97■■□□□ 1.43
SMN1-209ENST00000514951 SOGA3Q5TF21 947 aa23.97■■□□□ 1.43
SMN1-209ENST00000514951 C1orf115Q9H7X2 142 aa23.97■■□□□ 1.43
SMN1-209ENST00000514951 LTBP1Q14766 1721 aa23.96■■□□□ 1.43
SMN1-209ENST00000514951 KIF3CO14782 793 aa23.96■■□□□ 1.43
SMN1-209ENST00000514951 CCDC93Q567U6 631 aa23.96■■□□□ 1.43
SMN1-209ENST00000514951 ZNF594Q96JF6 807 aaPredicted RBP23.96■■□□□ 1.43
SMN1-209ENST00000514951 NFKBIEO00221 500 aa23.95■■□□□ 1.42
SMN1-209ENST00000514951 RFX5P48382 616 aaPredicted RBP23.95■■□□□ 1.42
SMN1-209ENST00000514951 MTX1Q13505 466 aa23.95■■□□□ 1.42
SMN1-209ENST00000514951 CC2D2BQ6DHV5 1058 aa23.95■■□□□ 1.42
SMN1-209ENST00000514951 ZBTB40Q9NUA8 1239 aa23.95■■□□□ 1.42
SMN1-209ENST00000514951 BSDC1Q9NW68 430 aaPredicted RBP23.95■■□□□ 1.42
SMN1-209ENST00000514951 SBF1O95248 1867 aa23.94■■□□□ 1.42
SMN1-209ENST00000514951 IGHMBP2P38935 993 aaKnown RBP23.94■■□□□ 1.42
SMN1-209ENST00000514951 NMRK2Q9NPI5 230 aa23.94■■□□□ 1.42
SMN1-209ENST00000514951 A0A1B0GUL6 1792 aa23.94■■□□□ 1.42
SMN1-209ENST00000514951 RTKN2Q8IZC4 609 aa23.93■■□□□ 1.42
SMN1-209ENST00000514951 DUOX1Q9NRD9 1551 aa23.93■■□□□ 1.42
SMN1-209ENST00000514951 CCDC88AQ3V6T2 1871 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms