RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 APAF1O14727 1248 aa31.29■■■□□ 2.6
CCND3-221ENST00000514588 ATP5J2-PTCD1G3V325 749 aa31.28■■■□□ 2.6
CCND3-221ENST00000514588 ZNRF3Q9ULT6 936 aa31.28■■■□□ 2.6
CCND3-221ENST00000514588 TNS4Q8IZW8 715 aa31.27■■■□□ 2.6
CCND3-221ENST00000514588 FAM89AQ96GI7 184 aa31.27■■■□□ 2.6
CCND3-221ENST00000514588 VEGFBP49765 207 aa31.26■■■□□ 2.59
CCND3-221ENST00000514588 CXCL9Q07325 125 aa31.26■■■□□ 2.59
CCND3-221ENST00000514588 DDX60Q8IY21 1712 aaKnown RBP31.25■■■□□ 2.59
CCND3-221ENST00000514588 KIAA2012Q0VF49 1180 aa31.25■■■□□ 2.59
CCND3-221ENST00000514588 USP50Q70EL3 339 aaPredicted RBP31.25■■■□□ 2.59
CCND3-221ENST00000514588 IFT57Q9NWB7 429 aa31.25■■■□□ 2.59
CCND3-221ENST00000514588 TMC4Q7Z404 712 aa31.24■■■□□ 2.59
CCND3-221ENST00000514588 GPRC5DQ9NZD1 345 aa31.24■■■□□ 2.59
CCND3-221ENST00000514588 TAF1P21675 1872 aa31.24■■■□□ 2.59
CCND3-221ENST00000514588 TRIM28Q13263 835 aaKnown RBP31.23■■■□□ 2.59
CCND3-221ENST00000514588 SF3B3Q15393 1217 aaKnown RBP31.23■■■□□ 2.59
CCND3-221ENST00000514588 GNAI1P63096 354 aa31.22■■■□□ 2.59
CCND3-221ENST00000514588 DUOX1Q9NRD9 1551 aa31.22■■■□□ 2.59
CCND3-221ENST00000514588 RASSF10A6NK89 507 aa31.21■■■□□ 2.59
CCND3-221ENST00000514588 CALD1Q05682 793 aaKnown RBP31.21■■■□□ 2.59
CCND3-221ENST00000514588 ELL2O00472 640 aaPredicted RBP31.2■■■□□ 2.59
CCND3-221ENST00000514588 GMPSP49915 693 aaPredicted RBP31.2■■■□□ 2.59
CCND3-221ENST00000514588 FMR1Q06787 632 aaKnown RBP eCLIP31.2■■■□□ 2.592e-6■□□□□ 11
CCND3-221ENST00000514588 RTL5Q5HYW3 569 aaPredicted RBP31.2■■■□□ 2.59
CCND3-221ENST00000514588 CELF1Q92879 486 aaKnown RBP31.2■■■□□ 2.59
CCND3-221ENST00000514588 ADARB2Q9NS39 739 aaKnown RBP31.2■■■□□ 2.59
CCND3-221ENST00000514588 LRRC37AA6NMS7 1700 aa31.2■■■□□ 2.58
CCND3-221ENST00000514588 DEFB115Q30KQ5 88 aa31.19■■■□□ 2.58
CCND3-221ENST00000514588 CIAPIN1Q6FI81 312 aa31.19■■■□□ 2.58
CCND3-221ENST00000514588 PHAXQ9H814 394 aaKnown RBP31.19■■■□□ 2.58
CCND3-221ENST00000514588 FOXN1O15353 648 aa31.18■■■□□ 2.58
CCND3-221ENST00000514588 GOLGA2Q08379 1002 aa31.18■■■□□ 2.58
CCND3-221ENST00000514588 RIC3Q7Z5B4 369 aa31.18■■■□□ 2.58
CCND3-221ENST00000514588 ABT1Q9ULW3 272 aaKnown RBP31.18■■■□□ 2.58
CCND3-221ENST00000514588 IRS4O14654 1257 aaPredicted RBP31.17■■■□□ 2.58
CCND3-221ENST00000514588 RAD17O75943 681 aa31.17■■■□□ 2.58
CCND3-221ENST00000514588 COL4A1P02462 1669 aa31.16■■■□□ 2.58
CCND3-221ENST00000514588 TNIP1Q15025 636 aa31.16■■■□□ 2.58
CCND3-221ENST00000514588 C8orf58Q8NAV2 365 aa31.16■■■□□ 2.58
CCND3-221ENST00000514588 YDJCA8MPS7 323 aa31.15■■■□□ 2.58
CCND3-221ENST00000514588 TRAF5O00463 557 aa31.15■■■□□ 2.58
CCND3-221ENST00000514588 CDHR2Q9BYE9 1310 aa31.15■■■□□ 2.58
CCND3-221ENST00000514588 CAPN15O75808 1086 aa31.14■■■□□ 2.58
CCND3-221ENST00000514588 ZBTB38Q8NAP3 1195 aaPredicted RBP31.14■■■□□ 2.58
CCND3-221ENST00000514588 NSFL1CQ9UNZ2 370 aaKnown RBP31.14■■■□□ 2.58
CCND3-221ENST00000514588 BCL2L13Q9BXK5 485 aa31.13■■■□□ 2.57
CCND3-221ENST00000514588 WBP1LQ9NX94 342 aa31.13■■■□□ 2.57
CCND3-221ENST00000514588 GPSM2P81274 684 aa31.12■■■□□ 2.57
CCND3-221ENST00000514588 WASHC4Q2M389 1173 aa31.12■■■□□ 2.57
CCND3-221ENST00000514588 CST9Q5W186 159 aa31.12■■■□□ 2.57
CCND3-221ENST00000514588 AIDAQ96BJ3 306 aa31.12■■■□□ 2.57
CCND3-221ENST00000514588 MYD88Q99836 296 aa31.12■■■□□ 2.57
CCND3-221ENST00000514588 WDR33Q9C0J8 1336 aaKnown RBP31.12■■■□□ 2.57
CCND3-221ENST00000514588 POLLQ9UGP5 575 aa31.11■■■□□ 2.57
CCND3-221ENST00000514588 RPS8P62241 208 aaKnown RBP31.1■■■□□ 2.57
CCND3-221ENST00000514588 CCDC184Q52MB2 194 aa31.1■■■□□ 2.57
CCND3-221ENST00000514588 PGAP2Q9UHJ9 254 aa31.1■■■□□ 2.57
CCND3-221ENST00000514588 C6orf229H3BNL8 230 aa31.09■■■□□ 2.57
CCND3-221ENST00000514588 CTCFP49711 727 aaPredicted RBP31.09■■■□□ 2.57
CCND3-221ENST00000514588 HIRAP54198 1017 aaPredicted RBP31.09■■■□□ 2.57
CCND3-221ENST00000514588 CCDC191Q8NCU4 936 aa31.09■■■□□ 2.57
CCND3-221ENST00000514588 CNOT7Q9UIV1 285 aaKnown RBP31.09■■■□□ 2.57
CCND3-221ENST00000514588 SHTN1A0MZ66 631 aa31.08■■■□□ 2.57
CCND3-221ENST00000514588 RIMBP2O15034 1052 aa31.08■■■□□ 2.57
CCND3-221ENST00000514588 CCDC30Q5VVM6 783 aa31.08■■■□□ 2.57
CCND3-221ENST00000514588 TRPM4Q8TD43 1214 aa31.08■■■□□ 2.57
CCND3-221ENST00000514588 DBNDD1Q9H9R9 158 aa31.08■■■□□ 2.57
CCND3-221ENST00000514588 PRDM10Q9NQV6 1147 aa31.08■■■□□ 2.57
CCND3-221ENST00000514588 TSPYL6Q8N831 410 aa31.07■■■□□ 2.56
CCND3-221ENST00000514588 GLIS2Q9BZE0 524 aaPredicted RBP31.07■■■□□ 2.56
CCND3-221ENST00000514588 SEC31BQ9NQW1 1179 aa31.07■■■□□ 2.56
CCND3-221ENST00000514588 TRPM7Q96QT4 1865 aa31.07■■■□□ 2.56
CCND3-221ENST00000514588 PCCAP05165 728 aaPredicted RBP31.06■■■□□ 2.56
CCND3-221ENST00000514588 HSP90B1P14625 803 aaKnown RBP31.06■■■□□ 2.56
CCND3-221ENST00000514588 ZC3H15Q8WU90 426 aaKnown RBP31.06■■■□□ 2.56
CCND3-221ENST00000514588 METTL22Q9BUU2 404 aaPredicted RBP31.06■■■□□ 2.56
CCND3-221ENST00000514588 CHMP4AQ9BY43 222 aa31.06■■■□□ 2.56
CCND3-221ENST00000514588 ZBTB12Q9Y330 459 aaPredicted RBP31.06■■■□□ 2.56
CCND3-221ENST00000514588 PSMD14O00487 310 aa31.05■■■□□ 2.56
CCND3-221ENST00000514588 DDX58O95786 925 aaKnown RBP31.05■■■□□ 2.56
CCND3-221ENST00000514588 TBC1D16Q8TBP0 767 aa31.05■■■□□ 2.56
CCND3-221ENST00000514588 JARID2Q92833 1246 aaPredicted RBP31.05■■■□□ 2.56
CCND3-221ENST00000514588 CAPNS2Q96L46 248 aa31.05■■■□□ 2.56
CCND3-221ENST00000514588 CWC25Q9NXE8 425 aaPredicted RBP31.05■■■□□ 2.56
CCND3-221ENST00000514588 TLL2Q9Y6L7 1015 aa31.05■■■□□ 2.56
CCND3-221ENST00000514588 H7C1D1 291 aa31.04■■■□□ 2.56
CCND3-221ENST00000514588 MICALL2Q8IY33 904 aa31.04■■■□□ 2.56
CCND3-221ENST00000514588 DPF2Q92785 391 aa31.04■■■□□ 2.56
CCND3-221ENST00000514588 GPR101Q96P66 508 aaPredicted RBP31.04■■■□□ 2.56
CCND3-221ENST00000514588 EYA3Q99504 573 aa31.04■■■□□ 2.56
CCND3-221ENST00000514588 MAP2K1Q02750 393 aaPredicted RBP31.03■■■□□ 2.56
CCND3-221ENST00000514588 DOK7Q18PE1 504 aa31.03■■■□□ 2.56
CCND3-221ENST00000514588 PAXIP1Q6ZW49 1069 aaPredicted RBP31.03■■■□□ 2.56
CCND3-221ENST00000514588 TSR2Q969E8 191 aaKnown RBP31.03■■■□□ 2.56
CCND3-221ENST00000514588 ECE2O60344 883 aa31.02■■■□□ 2.56
CCND3-221ENST00000514588 PDE8AO60658 829 aa31.02■■■□□ 2.56
CCND3-221ENST00000514588 CELF2O95319 508 aaKnown RBP31.02■■■□□ 2.56
CCND3-221ENST00000514588 ECE1P42892 770 aa31.02■■■□□ 2.56
CCND3-221ENST00000514588 CCDC152Q4G0S7 254 aa31.02■■■□□ 2.56
CCND3-221ENST00000514588 CYP4F22Q6NT55 531 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms