RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
HMGXB3-205ENST00000514469 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-205ENST00000514469 SUPT20HQ8NEM7 779 aa13.48□□□□□ -0.25
HMGXB3-205ENST00000514469 MYD88Q99836 296 aa13.48□□□□□ -0.25
HMGXB3-205ENST00000514469 TMX4Q9H1E5 349 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-205ENST00000514469 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 PPIP5K2O43314 1243 aa13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 EIF6P56537 245 aaKnown RBP13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 AOC3Q16853 763 aa13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 DPP8Q6V1X1 898 aaPredicted RBP13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 LDHDQ86WU2 507 aa13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 WDR63Q8IWG1 891 aa13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 CCDC191Q8NCU4 936 aa13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 KLRG1Q96E93 195 aa13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 HACL1Q9UJ83 578 aa13.47□□□□□ -0.25
HMGXB3-205ENST00000514469 PCCAP05165 728 aaPredicted RBP13.46□□□□□ -0.25
HMGXB3-205ENST00000514469 RTL5Q5HYW3 569 aaPredicted RBP13.46□□□□□ -0.25
HMGXB3-205ENST00000514469 NIM1KQ8IY84 436 aa13.46□□□□□ -0.25
HMGXB3-205ENST00000514469 MPNDQ8N594 471 aa13.46□□□□□ -0.25
HMGXB3-205ENST00000514469 CELF1Q92879 486 aaKnown RBP13.46□□□□□ -0.25
HMGXB3-205ENST00000514469 STK31Q9BXU1 1019 aa13.46□□□□□ -0.25
HMGXB3-205ENST00000514469 CWC25Q9NXE8 425 aaPredicted RBP13.46□□□□□ -0.25
HMGXB3-205ENST00000514469 MAP3K2Q9Y2U5 619 aa13.46□□□□□ -0.25
HMGXB3-205ENST00000514469 TAF1P21675 1872 aa13.46□□□□□ -0.26
HMGXB3-205ENST00000514469 EPHX2P34913 555 aa13.45□□□□□ -0.26
HMGXB3-205ENST00000514469 KIAA2012Q0VF49 1180 aa13.45□□□□□ -0.26
HMGXB3-205ENST00000514469 KSR2Q6VAB6 950 aa13.45□□□□□ -0.26
HMGXB3-205ENST00000514469 PASKQ96RG2 1323 aa13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 CDHR2Q9BYE9 1310 aa13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 PI4KAP2A4QPH2 592 aa13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 SCNN1DP51172 638 aa13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 PNMA8AQ86V59 439 aaPredicted RBP13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 PI4KAP1Q8N8J0 262 aa13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 GJA3Q9Y6H8 435 aa13.44□□□□□ -0.26
HMGXB3-205ENST00000514469 EAPPQ56P03 285 aaPredicted RBP13.43□□□□□ -0.26
HMGXB3-205ENST00000514469 G2E3Q7L622 706 aa13.43□□□□□ -0.26
HMGXB3-205ENST00000514469 ZNRF3Q9ULT6 936 aa13.43□□□□□ -0.26
HMGXB3-205ENST00000514469 SALL2Q9Y467 1007 aaPredicted RBP13.43□□□□□ -0.26
HMGXB3-205ENST00000514469 PDE8AO60658 829 aa13.42□□□□□ -0.26
HMGXB3-205ENST00000514469 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
HMGXB3-205ENST00000514469 LMOD1P29536 600 aaPredicted RBP13.42□□□□□ -0.26
HMGXB3-205ENST00000514469 FAM9BQ8IZU0 186 aa13.42□□□□□ -0.26
HMGXB3-205ENST00000514469 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
HMGXB3-205ENST00000514469 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
HMGXB3-205ENST00000514469 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 VAMP4O75379 141 aa13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 GPSM2P81274 684 aa13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 EXOSC9Q06265 439 aaKnown RBP13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 CXCL9Q07325 125 aa13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 NEXNQ0ZGT2 675 aa13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 FLIIQ13045 1269 aa13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 CCDC152Q4G0S7 254 aa13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
HMGXB3-205ENST00000514469 ZNF521Q96K83 1311 aa13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 YDJCA8MPS7 323 aa13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 ITGBL1O95965 494 aaPredicted RBP13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 EPS15P42566 896 aa13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 CWF19L2Q2TBE0 894 aaKnown RBP13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 JARID2Q92833 1246 aaPredicted RBP13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 GPRC5DQ9NZD1 345 aa13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 POLLQ9UGP5 575 aa13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 RTL9Q8NET4 1388 aa13.4□□□□□ -0.26
HMGXB3-205ENST00000514469 CTSWP56202 376 aa13.39□□□□□ -0.27
HMGXB3-205ENST00000514469 WASHC4Q2M389 1173 aa13.39□□□□□ -0.27
HMGXB3-205ENST00000514469 CIAPIN1Q6FI81 312 aa13.39□□□□□ -0.27
HMGXB3-205ENST00000514469 USP50Q70EL3 339 aaPredicted RBP13.39□□□□□ -0.27
HMGXB3-205ENST00000514469 MYH16Q9H6N6 1097 aa13.39□□□□□ -0.27
HMGXB3-205ENST00000514469 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
HMGXB3-205ENST00000514469 PCNTO95613 3336 aa13.39□□□□□ -0.27
HMGXB3-205ENST00000514469 RAD17O75943 681 aa13.38□□□□□ -0.27
HMGXB3-205ENST00000514469 GMPSP49915 693 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-205ENST00000514469 FKBP5Q13451 457 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-205ENST00000514469 MAP1SQ66K74 1059 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-205ENST00000514469 TBC1D16Q8TBP0 767 aa13.38□□□□□ -0.27
HMGXB3-205ENST00000514469 DNAAF4Q8WXU2 420 aa13.38□□□□□ -0.27
HMGXB3-205ENST00000514469 EYA3Q99504 573 aa13.38□□□□□ -0.27
HMGXB3-205ENST00000514469 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
HMGXB3-205ENST00000514469 MYH3P11055 1940 aa13.37□□□□□ -0.27
HMGXB3-205ENST00000514469 CNTNAP1P78357 1384 aa13.37□□□□□ -0.27
HMGXB3-205ENST00000514469 C6orf229H3BNL8 230 aa13.37□□□□□ -0.27
HMGXB3-205ENST00000514469 H7C1W4 665 aa13.37□□□□□ -0.27
HMGXB3-205ENST00000514469 GCKRQ14397 625 aa13.37□□□□□ -0.27
HMGXB3-205ENST00000514469 TNIP1Q15025 636 aa13.37□□□□□ -0.27
HMGXB3-205ENST00000514469 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
HMGXB3-205ENST00000514469 TTLL11Q8NHH1 800 aa13.37□□□□□ -0.27
HMGXB3-205ENST00000514469 CCDC85AQ96PX6 553 aaPredicted RBP13.37□□□□□ -0.27
HMGXB3-205ENST00000514469 TMEM88BA6NKF7 163 aa13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 CASP7P55210 303 aa13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 UBE3BQ7Z3V4 1068 aa13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 LINS1Q8NG48 757 aa13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 CDC5LQ99459 802 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms