RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 GSE1Q14687 1217 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 EYA3Q99504 573 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 CNNM1Q9NRU3 951 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 CCDC88CQ9P219 2028 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 PES1O00541 588 aaKnown RBP5.72□□□□□ -1.49
PTPN13-209ENST00000511467 ESCO1Q5FWF5 840 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 TBC1D22AQ8WUA7 517 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 SRRTQ9BXP5 876 aaKnown RBP5.72□□□□□ -1.49
PTPN13-209ENST00000511467 RBM28Q9NW13 759 aaKnown RBP5.72□□□□□ -1.49
PTPN13-209ENST00000511467 THRAP3Q9Y2W1 955 aaKnown RBP5.72□□□□□ -1.49
PTPN13-209ENST00000511467 SLC26A4O43511 780 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 PDE4AP27815 886 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 PODNQ7Z5L7 613 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 CPS1P31327 1500 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 TOM1L2Q6ZVM7 507 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 MYO18AQ92614 2054 aaKnown RBP5.72□□□□□ -1.49
PTPN13-209ENST00000511467 SDF4Q9BRK5 362 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 VWDEQ8N2E2 1590 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 GOLGA6CA6NDK9 693 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 GOLGA6BA6NDN3 693 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 GOLGA6DP0CG33 693 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 RILPL2Q969X0 211 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 DDX19AQ9NUU7 478 aaKnown RBP5.72□□□□□ -1.49
PTPN13-209ENST00000511467 GOLGA6AQ9NYA3 693 aa5.72□□□□□ -1.49
PTPN13-209ENST00000511467 RRP12Q5JTH9 1297 aaKnown RBP5.71□□□□□ -1.49
PTPN13-209ENST00000511467 USH1CQ9Y6N9 552 aa5.71□□□□□ -1.49
PTPN13-209ENST00000511467 BRPF1P55201 1214 aaPredicted RBP5.71□□□□□ -1.49
PTPN13-209ENST00000511467 APOBRQ0VD83 1088 aa5.71□□□□□ -1.49
PTPN13-209ENST00000511467 CATIPQ7Z7H3 387 aa5.71□□□□□ -1.49
PTPN13-209ENST00000511467 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.71□□□□□ -1.49
PTPN13-209ENST00000511467 V9GYY5 206 aaPredicted RBP5.71□□□□□ -1.49
PTPN13-209ENST00000511467 ANKRD62A6NC57 917 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 TNNI2P48788 182 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 GALNT17Q6IS24 598 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 CCDC91Q7Z6B0 441 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 MAGEF1Q9HAY2 307 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 CWC25Q9NXE8 425 aaPredicted RBP5.71□□□□□ -1.5
PTPN13-209ENST00000511467 RTEL1Q9NZ71 1219 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 TULP4Q9NRJ4 1543 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 RFX7Q2KHR2 1363 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 IBTKQ9P2D0 1353 aaPredicted RBP5.71□□□□□ -1.5
PTPN13-209ENST00000511467 RIMBP3CA6NJZ7 1639 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 RIMBP3BA6NNM3 1639 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 RIMBP3Q9UFD9 1639 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 CTCFLQ8NI51 663 aaPredicted RBP5.71□□□□□ -1.5
PTPN13-209ENST00000511467 NAP1L5Q96NT1 182 aaPredicted RBP5.71□□□□□ -1.5
PTPN13-209ENST00000511467 FAM114A2Q9NRY5 505 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 PHF8Q9UPP1 1060 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 H0YCG3 227 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 APAF1O14727 1248 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 NCBP1Q09161 790 aaKnown RBP5.71□□□□□ -1.5
PTPN13-209ENST00000511467 AKAP4Q5JQC9 854 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 CFAP70Q5T0N1 1121 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 CLSTN1O94985 981 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 SH3BGRP55822 239 aaPredicted RBP5.71□□□□□ -1.5
PTPN13-209ENST00000511467 PPFIBP1Q86W92 1011 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 FSD1Q9BTV5 496 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 NUCKS1Q9H1E3 243 aaKnown RBP5.71□□□□□ -1.5
PTPN13-209ENST00000511467 N4BP2Q86UW6 1770 aaPredicted RBP5.71□□□□□ -1.5
PTPN13-209ENST00000511467 DIP2BQ9P265 1576 aa5.71□□□□□ -1.5
PTPN13-209ENST00000511467 CARNS1A5YM72 827 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 KCNG4Q8TDN1 519 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 IWS1Q96ST2 819 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 PXDNLA1KZ92 1463 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 CHD1LQ86WJ1 897 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 DCAF5Q96JK2 942 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 MIS12Q9H081 205 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 ARHGEF37A1IGU5 675 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 USO1O60763 962 aaKnown RBP5.7□□□□□ -1.5
PTPN13-209ENST00000511467 K7ELQ4 463 aaPredicted RBP5.7□□□□□ -1.5
PTPN13-209ENST00000511467 PRKAR2BP31323 418 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 SLFN5Q08AF3 891 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 MAP3K11Q16584 847 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 ANO10Q9NW15 660 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 DUOX1Q9NRD9 1551 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 ANKRD18BA2A2Z9 1011 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 EXOC5O00471 708 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 CC2D2BQ6DHV5 1058 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 DIP2CQ9Y2E4 1556 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 FAM193AP78312 1265 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 ORC2Q13416 577 aaPredicted RBP5.7□□□□□ -1.5
PTPN13-209ENST00000511467 CDC37L1Q7L3B6 337 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 KCTD17Q8N5Z5 321 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 CFAP157Q5JU67 520 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 FKBP15Q5T1M5 1219 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 NAP1L3Q99457 506 aaPredicted RBP5.7□□□□□ -1.5
PTPN13-209ENST00000511467 EDEM3Q9BZQ6 932 aa5.7□□□□□ -1.5
PTPN13-209ENST00000511467 ZNF142P52746 1687 aaPredicted RBP5.69□□□□□ -1.5
PTPN13-209ENST00000511467 GNA11P29992 359 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 GBP1P32455 592 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 IL15P40933 162 aaPredicted RBP5.69□□□□□ -1.5
PTPN13-209ENST00000511467 TRIM14Q14142 442 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 BRAPQ7Z569 592 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 SLC26A8Q96RN1 970 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 TSGA10Q9BZW7 698 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 RPGRQ92834 1020 aaKnown RBP5.69□□□□□ -1.5
PTPN13-209ENST00000511467 ERVV-2B6SEH9 535 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 UBR1Q8IWV7 1749 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 CDAN1Q8IWY9 1227 aa5.69□□□□□ -1.5
PTPN13-209ENST00000511467 KIAA1524Q8TCG1 905 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms