RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 HACL1Q9UJ83 578 aa20.99■□□□□ 0.95
LMNA-222ENST00000508500 CNTNAP1P78357 1384 aa20.98■□□□□ 0.95
LMNA-222ENST00000508500 SF3B3Q15393 1217 aaKnown RBP20.98■□□□□ 0.95
LMNA-222ENST00000508500 AOC3Q16853 763 aa20.98■□□□□ 0.95
LMNA-222ENST00000508500 DDX46Q7L014 1031 aaKnown RBP20.98■□□□□ 0.95
LMNA-222ENST00000508500 RIC3Q7Z5B4 369 aa20.98■□□□□ 0.95
LMNA-222ENST00000508500 MRS2Q9HD23 443 aa20.98■□□□□ 0.95
LMNA-222ENST00000508500 MYH3P11055 1940 aa20.98■□□□□ 0.95
LMNA-222ENST00000508500 EPHX2P34913 555 aa20.97■□□□□ 0.95
LMNA-222ENST00000508500 CELF1Q92879 486 aaKnown RBP20.97■□□□□ 0.95
LMNA-222ENST00000508500 PPIP5K2O43314 1243 aa20.96■□□□□ 0.95
LMNA-222ENST00000508500 EIF6P56537 245 aaKnown RBP20.96■□□□□ 0.95
LMNA-222ENST00000508500 GOLGA2Q08379 1002 aa20.96■□□□□ 0.95
LMNA-222ENST00000508500 TNS4Q8IZW8 715 aa20.96■□□□□ 0.95
LMNA-222ENST00000508500 MYD88Q99836 296 aa20.96■□□□□ 0.95
LMNA-222ENST00000508500 GJA3Q9Y6H8 435 aa20.96■□□□□ 0.95
LMNA-222ENST00000508500 IRS4O14654 1257 aaPredicted RBP20.95■□□□□ 0.94
LMNA-222ENST00000508500 ANP32CO43423 234 aa20.95■□□□□ 0.94
LMNA-222ENST00000508500 SCNN1DP51172 638 aa20.95■□□□□ 0.94
LMNA-222ENST00000508500 EAPPQ56P03 285 aaPredicted RBP20.95■□□□□ 0.94
LMNA-222ENST00000508500 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.94
LMNA-222ENST00000508500 MPNDQ8N594 471 aa20.95■□□□□ 0.94
LMNA-222ENST00000508500 MKRN1Q9UHC7 482 aaKnown RBP20.95■□□□□ 0.94
LMNA-222ENST00000508500 NCBP3Q53F19 620 aaKnown RBP20.94■□□□□ 0.94
LMNA-222ENST00000508500 DPP8Q6V1X1 898 aaPredicted RBP20.94■□□□□ 0.94
LMNA-222ENST00000508500 NIM1KQ8IY84 436 aa20.94■□□□□ 0.94
LMNA-222ENST00000508500 VPS33BQ9H267 617 aa20.94■□□□□ 0.94
LMNA-222ENST00000508500 THSD7BQ9C0I4 1608 aa20.93■□□□□ 0.94
LMNA-222ENST00000508500 SPEF2Q9C093 1822 aa20.93■□□□□ 0.94
LMNA-222ENST00000508500 EPS15P42566 896 aa20.93■□□□□ 0.94
LMNA-222ENST00000508500 ZBTB38Q8NAP3 1195 aaPredicted RBP20.93■□□□□ 0.94
LMNA-222ENST00000508500 JARID2Q92833 1246 aaPredicted RBP20.93■□□□□ 0.94
LMNA-222ENST00000508500 METTL22Q9BUU2 404 aaPredicted RBP20.93■□□□□ 0.94
LMNA-222ENST00000508500 TRPM7Q96QT4 1865 aa20.92■□□□□ 0.94
LMNA-222ENST00000508500 CXCL9Q07325 125 aa20.92■□□□□ 0.94
LMNA-222ENST00000508500 KIAA2012Q0VF49 1180 aa20.92■□□□□ 0.94
LMNA-222ENST00000508500 G2E3Q7L622 706 aa20.92■□□□□ 0.94
LMNA-222ENST00000508500 SUPT20HQ8NEM7 779 aa20.92■□□□□ 0.94
LMNA-222ENST00000508500 TMX4Q9H1E5 349 aaPredicted RBP20.92■□□□□ 0.94
LMNA-222ENST00000508500 IL16Q14005 1332 aa20.92■□□□□ 0.94
LMNA-222ENST00000508500 SCN9AQ15858 1988 aa20.92■□□□□ 0.94
LMNA-222ENST00000508500 TWISTNBQ3B726 338 aaPredicted RBP20.91■□□□□ 0.94
LMNA-222ENST00000508500 CCDC191Q8NCU4 936 aa20.91■□□□□ 0.94
LMNA-222ENST00000508500 ZNRF3Q9ULT6 936 aa20.91■□□□□ 0.94
LMNA-222ENST00000508500 MAP3K2Q9Y2U5 619 aa20.91■□□□□ 0.94
LMNA-222ENST00000508500 SALL2Q9Y467 1007 aaPredicted RBP20.91■□□□□ 0.94
LMNA-222ENST00000508500 POLR2AP24928 1970 aaKnown RBP20.9■□□□□ 0.94
LMNA-222ENST00000508500 PCCAP05165 728 aaPredicted RBP20.9■□□□□ 0.94
LMNA-222ENST00000508500 IGKV5-2P06315 115 aa20.9■□□□□ 0.94
LMNA-222ENST00000508500 MAP1SQ66K74 1059 aaPredicted RBP20.9■□□□□ 0.94
LMNA-222ENST00000508500 TMC4Q7Z404 712 aa20.9■□□□□ 0.94
LMNA-222ENST00000508500 PNMA8AQ86V59 439 aaPredicted RBP20.9■□□□□ 0.94
LMNA-222ENST00000508500 SEC31BQ9NQW1 1179 aa20.9■□□□□ 0.94
LMNA-222ENST00000508500 CLEC11AQ9Y240 323 aa20.9■□□□□ 0.94
LMNA-222ENST00000508500 PI4KAP2A4QPH2 592 aa20.89■□□□□ 0.93
LMNA-222ENST00000508500 TMEM88BA6NKF7 163 aa20.89■□□□□ 0.93
LMNA-222ENST00000508500 YDJCA8MPS7 323 aa20.89■□□□□ 0.93
LMNA-222ENST00000508500 KSR2Q6VAB6 950 aa20.89■□□□□ 0.93
LMNA-222ENST00000508500 PI4KAP1Q8N8J0 262 aa20.89■□□□□ 0.93
LMNA-222ENST00000508500 CWC25Q9NXE8 425 aaPredicted RBP20.89■□□□□ 0.93
LMNA-222ENST00000508500 FANCIQ9NVI1 1328 aa20.88■□□□□ 0.93
LMNA-222ENST00000508500 FOXN1O15353 648 aa20.88■□□□□ 0.93
LMNA-222ENST00000508500 DDX58O95786 925 aaKnown RBP20.88■□□□□ 0.93
LMNA-222ENST00000508500 VEGFBP49765 207 aa20.88■□□□□ 0.93
LMNA-222ENST00000508500 GPSM2P81274 684 aa20.88■□□□□ 0.93
LMNA-222ENST00000508500 CNTROBQ8N137 903 aa20.88■□□□□ 0.93
LMNA-222ENST00000508500 SPINK5Q9NQ38 1064 aaPredicted RBP20.88■□□□□ 0.93
LMNA-222ENST00000508500 POLLQ9UGP5 575 aa20.88■□□□□ 0.93
LMNA-222ENST00000508500 RASSF10A6NK89 507 aa20.87■□□□□ 0.93
LMNA-222ENST00000508500 RPS8P62241 208 aaKnown RBP20.87■□□□□ 0.93
LMNA-222ENST00000508500 GPRC5DQ9NZD1 345 aa20.87■□□□□ 0.93
LMNA-222ENST00000508500 NSFL1CQ9UNZ2 370 aaKnown RBP20.87■□□□□ 0.93
LMNA-222ENST00000508500 PSME4Q14997 1843 aa20.87■□□□□ 0.93
LMNA-222ENST00000508500 PDE8AO60658 829 aa20.86■□□□□ 0.93
LMNA-222ENST00000508500 SLC4A2P04920 1241 aa20.86■□□□□ 0.93
LMNA-222ENST00000508500 LMOD1P29536 600 aaPredicted RBP20.86■□□□□ 0.93
LMNA-222ENST00000508500 FMR1Q06787 632 aaKnown RBP eCLIP20.86■□□□□ 0.936e-10■■□□□ 11.5
LMNA-222ENST00000508500 WDR63Q8IWG1 891 aa20.86■□□□□ 0.93
LMNA-222ENST00000508500 CHMP4AQ9BY43 222 aa20.86■□□□□ 0.93
LMNA-222ENST00000508500 VAMP4O75379 141 aa20.85■□□□□ 0.93
LMNA-222ENST00000508500 RAD17O75943 681 aa20.85■□□□□ 0.93
LMNA-222ENST00000508500 GMPSP49915 693 aaPredicted RBP20.85■□□□□ 0.93
LMNA-222ENST00000508500 CWF19L2Q2TBE0 894 aaKnown RBP20.85■□□□□ 0.93
LMNA-222ENST00000508500 CIAPIN1Q6FI81 312 aa20.85■□□□□ 0.93
LMNA-222ENST00000508500 GPR101Q96P66 508 aaPredicted RBP20.85■□□□□ 0.93
LMNA-222ENST00000508500 CCDC85AQ96PX6 553 aaPredicted RBP20.85■□□□□ 0.93
LMNA-222ENST00000508500 STK31Q9BXU1 1019 aa20.85■□□□□ 0.93
LMNA-222ENST00000508500 CDHR2Q9BYE9 1310 aa20.84■□□□□ 0.93
LMNA-222ENST00000508500 CAPN15O75808 1086 aa20.84■□□□□ 0.93
LMNA-222ENST00000508500 USP50Q70EL3 339 aaPredicted RBP20.84■□□□□ 0.93
LMNA-222ENST00000508500 PRDM10Q9NQV6 1147 aa20.84■□□□□ 0.93
LMNA-222ENST00000508500 WBP1LQ9NX94 342 aa20.84■□□□□ 0.93
LMNA-222ENST00000508500 SHTN1A0MZ66 631 aa20.83■□□□□ 0.93
LMNA-222ENST00000508500 NEURL1BA8MQ27 555 aa20.83■□□□□ 0.93
LMNA-222ENST00000508500 RIMBP2O15034 1052 aa20.83■□□□□ 0.93
LMNA-222ENST00000508500 EXOSC9Q06265 439 aaKnown RBP20.83■□□□□ 0.93
LMNA-222ENST00000508500 WASHC4Q2M389 1173 aa20.83■□□□□ 0.93
LMNA-222ENST00000508500 FAM9BQ8IZU0 186 aa20.83■□□□□ 0.93
LMNA-222ENST00000508500 TBC1D16Q8TBP0 767 aa20.83■□□□□ 0.93
LMNA-222ENST00000508500 DBNDD1Q9H9R9 158 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms